Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<-------
GAMYB
<------
MYB83
--------->
TOE2(3)
<---------
MYB46(3)
--------->
TOE1(3)
<----------
DOF2
<------
MYB46(1)
--------->
MYB52(2)
------
ANAC58
<---------
ANAC58
<----------
DOF2
----------->
GT1
--------->
TOE1(3)
------
ANAC58
<---------
ANAC58
<---------
YAB1
<------
MYB46(1)
------->
TEIL
<-----
--
ANAC58
<---------
ANAC46
--------->
KAN4(2)
<------
MYB83
<-------
TEIL
--------->
TOE2(3)
--
ANAC58
<---------
ICU4
<---------
AtMYB61
<-------
GAMYB
<----------
DOF2
<-----------
GT1
--
GT1
--------->
ICU4
<-----------
RAV1(1)
<---------
MYB46(3)
--------->
AHL20(2)
<-----
cttcttttctatgtcataactacaggcttgtattgtgttggttattcttttgtttgttgttcggtttaaactttaaatacatgtatttaccttcaaactt
8156200
----------->
GT1
--------->
LBD16
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(2)
<-----------
GT1
--------->
AHL20(2)
<---------
AHL20(2)
<-
--------->
GLK1(2)
<---------
HSFB2a(2)
<---------
ARR11(3)
--------->
MYB52(2)
-----
DOF2
<---------
GLK1(2)
--------->
HSFB2a(2)
--------->
LBD16
<---------
ANAC58
<-
----
DAG2
----------->
ARR10
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ANAC58
<-------
tttttttttggtgagattctcaaactatttaatttaagtccagaaaaacgatttatttctccccaaaatatttgtatttcttac
tggtttgtttgaaacc
8156300
<---------
ANAC58
<---------
ANAC58
<---------
ARR14(2)
--------->
ARR14(2)
--------->
LBD16
<---------
ANAC46
----------->
RAV1(1)
<---------
ANAC58
--------->
ANAC58
--------->
ANAC58
<---------
ANAC58
--------->
ANAC58
------>
NtERF2
<---------
HSFB2a(2)
<---------
TOE2(3)
<---------
GLK1(2)
------
---------
DOF2
--------->
ANAC46
--------->
ANAC58
<---------
ANAC55(1)
--------->
YAB1
--------
DAG2
<---------
AtLEC2
--------->
ANAC46
<---------
LBD16
<---------
ZAT18
----
GT1
<----------
DOF2
--------->
HSFB2a(2)
<---------
TOE1(3)
<---------
YAB1
---------
cctttttgaggcctcttggactttacatggcacaaacttggagaagaagcaacacgattagggttttgttccgggtcttgattcttgcactcatcaatct
8156400
<---------
YAB1
<---------
AHL20(1)
<---------
ATHB12
--------->
AHL20(1)
<---------
GLK1(1)
<---------
AHL20(2)
--------->
At4g35610
<---------
YAB1
--------->
ZAT6
<---------
MYB52(1)
--------->
YAB1
----------->
GT1
--------->
ANAC46
<---------
ATHB12
--------->
GLK1(1)
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
--->
YAB1
<---------
ZAT2
<---------
At4g35610
<-----------
GT1
<---------
YAB1
---
>
WOX13(1)
--------->
ZAT2
<---------
MYB52(1)
--------->
AHL20(2)
<---------
YAB1
--------
tcaatcgtttgctcaagctggaaatcatcgttgtgctccttagattgtaattaattactcttctcgttctatctctcttattatcctcgacactagcatg
8156500
<-----------
ARR10
--------->
ARR11(3)
<---------
ARR11(3)
<-------
TEIL
------------>
CBF
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
--------------->
AtSPL3
--------->
HSFC1(2)
<---------
ALFIN1
<---------
MYB46(3)
<---------
REM1(2)
--------------------->
WRI1
--------->
ANAC46
---------->
ARF1
<---------
ANAC46
------>
ZmHOX2a(1)
--------->
ANAC58
---------->
ID1
------>
At4g35610
------>
ZmHOX2a(1)
--------->
MYB46(3)
--------->
REM1(1)
------->
GAMYB
->
YAB1
<---------
HSFC1(2)
---------->
DOF2
--------->
ANAC58
--------->
MYB52(1)
-------
agcttcagtggatgtttctcctatttcctcatatgcaaaagctctaaccat
tctctccctcgctacacgtacaatatctaacgctctcttgtctccctgc
8156600
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
ARR11(3)
--------->
AHL20(1)
--------->
SPL7
<-----------
GT1
--------->
AHL20(1)
<---------
ARR11(3)
<---------
DAG2
----------->
GT1
<---------
ARR11(3)
<---------
AHL20(1)
<---------
GLK1(1)
---------->
DOF2
--------->
AHL20(2)
--------->
GLK1(2)
<------------
CBF
<---------
SPL7
<-----------
TBP
<---------
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
-->
AtLEC2
<----------
DOF2
<---------
TOE2(3)
--------->
AHL20(2)
<---------
ZAT6
<---------
AHL20(2)
aaaccattgaattccctttttcgaacggacaaaggtatatataactctctattaaatatatttttttgttagtgataatctctatatatttttgtattag
8156700
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(1)
--------->
AHL20(1)
------
<----------
DOF2
--------->
ARR11(3)
--------->
AHL20(2)
<---------
ANAC58
<---------
ARR11(3)
--------->
YAB1
<---------
ANAC58
<---------
KAN4(2)
<---------
AHL20(2)
------
<---------
ANAC58
--------->
ALFIN1
--------->
AHL20(2)
--------->
ICU4
<---------
ANAC58
<---------
ANAC46
--------->
ICU4
--------->
YAB1
<-----
<-----------
GT1
<---------
ANAC58
<---------
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC58
<---------
AHL20(2)
atttagataatcactaaattacttgcttcttttttagcgtgggaatattttattttttaatttttagtaattttttgtgtgactaataatatttaaattt
8156800
<--------
ATHB1
--------->
ATHB51
--------->
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ICU4
<--------
ATHB1
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
ATHB51
<----------
DOF2
<---------
AHL20(1)
--------->
ICU4
--------->
TOE2(3)
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
--------->
AHL20(1)
--------->
TOE2(3)
<---------
AHL20(2)
<---------
YAB1
--
<-----------
TBP
<---------
ZAT6
--------->
AHL20(2)
<---------
At5g28300
--------
--->
AHL20(1)
----------->
GT1
<---------
AHL20(2)
<-----------
GT1
<-------
--->
AHL20(2)
<---------
YAB1
<---------
ICU4
--------->
AHL20(2)
--------->
AHL20(2)
----
AHL20(2)
<------------
CBF
--------->
ICU4
<---------
AHL20(2)
<---------
AHL20(2)
tttgaaatatatgtttttatatgtctacttattgttaataatttaataatttaaatttctttaattttaaaattaccatggcaaataaattcaatttata
8156900
<------
ZmHOX2a(1)
<---------
TOE2(3)
<----------
DOF2
<---------------
AGL15
--------------->
AGL15
===============================
<-----------------
AGL3
<-----------------
AG
<-----------------
AGL1
--
<-----------------
AGL2
----
----------------->
AGL3
<---
--------->
MYB52(1)
<---------
ARR11(3)
-----
------->
ANAC46
<-----------
GT1
----------->
RAV1(1)
----------->
GT1
--------
->
AHL20(2)
<---------
TOE2(3)
--------->
YAB1
<-----------
GT1
---------
--
AHL20(2)
<----------
DOF2
<---------
AHL20(2)
<<<<<<<<<<
GT-3b
<-------------
tacacaactgtttttaaaaactctaatacaacttttaagtttttacaacattttatcaaaacaacatatttttctttataaggaaacacccataaaaagt
8157000
------>
MYB46(1)
--------->
AHL20(2)
------>
MYB83
--------->
AHL20(1)
<---------
ARR14(2)
<---------
AHL20(2)
<---------
MYB59
--------->
AHL20(2)
==
MADS_MADS
<---------
YAB1
<---------
AHL20(2)
----->
TEIL
--------->
MYB52(1)
<-----------
GT1
----->
ZAT18
----------->
RAV1(1)
--------->
AHL20(2)
-
------
ZAT18
--------->
MYB46(3)
--------->
AHL20(2)
<---------
AHL20(2)
-----
---->
ALFIN1
--------->
YAB1
--------->
ICU4
<---------
AHL20(2)
-----
->
DAG2
--------->
YAB1
<---------
AHL20(2)
<---------
AHL20(1)
-----
->
DOF2
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--
AGL15
--------->
YAB1
--------->
AtMYB61
--------->
YAB1
--------->
AHL20(1)
<---------
AHL20(2)
ggacctatccagttccaaaataataagaaaaccaccagaaaataaatatgaaaacaataatattcaaatccaaataaaattacaaaattaaattaaatac
8157100
Previous
Next
AGI:
At2g18810.1
Description:
DNA binding. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT2G31720.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Protein of unknown function DUF313 (InterPro:IPR005508)
Range:
from: 8155021
to: 8156551
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version