Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->ANAC46                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                ------>NtERF2                                                                <---------ATERF1(1)                                                               --------->DEAR3(1)                                                     <---------At4g35610                         --------->TOE2(3)    ------>ZmHOX2a(1)----------->HVH21                  --------->YAB1        <----------DOF2      <---------ATERF1(1)               ---------->DOF2          <---------DAG2      <---------DEAR3(1)    <---------------------WRI1       <-----------GT1 --------->At4g35610               <-----------GT1 <---------HSFC1(2)      --------->TOE1(3)   --------->TOE2(3)<------NtERF2--------->MYB46(3)   agacgtttcgaaactcacaaagataaaccctaaaacaataaacttttcctcagacatcagcctcggcgaccacgacaacaacttcattttttctcgtcga  7934900                 --------->ANAC58                 --------->ANAC58                                                     ---------->DOF2           --------->GLK1(1)            <---------ALFIN1         <XXXXXXXXXXXXXXXXXXXXMIR415       --------->LBD16           <---------ANAC58             --------->GLK1(1)    --------->LBD16      <---------HSFB2a(2)        <---------ANAC58             <---------GLK1(1)   <---------HSFB2a(2)      --------->HSFB2a(2)      <---------DOF5.7(2)<-----------------AGL1          --------->HSFB2a(2)     <---------LBD16         --------->DOF5.7(2)  <-----------------AG           <---------LBD16   gtttttttctgggaattgcaggtaatctctcgttaacgtgcccctctggtttctcaaatttgggaactctgtttttgttctgttctgggaaagtagaaca  7935000                                                 <------------CBF                                               --------->AHL20(2)                                               --------->AHL20(1)                                               <---------AHL20(2)           --------->SPL7                      <---------AHL20(1)       <---------TOE2(3)                      <---------AHL20(2)                   <-----------GT1      <---------------------WRI1       ----------->GT1                       --------->YAB1      <---------At5g28300              --------->LBD16                     --------->At5g28300     --     <-----------GT1                 <---------LBD16 ---------->DOF2      ----------->GT1    ------>ZmHOX2a(1)     --------->MYB52(1)     --------->LBD16   --------->AHL20(2)---------->DOF2 --------->YAB1     --   attcgaattacggttcgaccgaagtcaaaccgggttttgtccggttaaataaattgaaagaaaaaacaaaggaacactgtaataaaaaccctctcctaaa  7935100                                                   <----------DOF2         <<<<<<<<<TBF1                  --------->LBD16            <---------MYB52(1) ------->TOE1(3)                       --------->LBD16           <---------YAB1 ------->TOE2(3)                      <---------LBD16      <---------YAB1 --------->KAN4(2)<---------   accctaatttcttcttctctccgtcttccttcttgttgttcccggtgcgatttctttcattttgatttcgatagtttattcttctccttgttttcactgt  7935200                                   --------->ZAT6                                 <-----------GT1                                              <------                              <---------ICU4                                          --------->YAB1     <---------WOX13(1)      --------->ICU4                                        <------------CBF <    <------------CBF    --------->YAB1                                            --------------->AGL15   --------->ATHB12    ----------->GT1                                           <---------YAB1 <----  <---------YAB1     <------------CBF  <------------CBF                        <-----------GT1<------ --GT1  <---------GLK1(2) <---------YAB1     <----------DOF2      --------->ATHB12<---------------AGL15   ttgtgtgattgattctctccatgaattgataattcttacactattgtcttttagctcgactcttaaactgatttgttcttgttaccattgatggttttaa  7935300                        <---------At4g35610   <-------PIF5      <---------ANAC46       --------->HSFB2a(1)   ------->PIF5    --------->ZAT14          <---------HSFB2a(1)                          <----------DOF2 ---AHL20(2)      --------->ALFIN1     <------NtERF2                           <---------YAB1 -----------RAV1(2)<---------ZAT14 <---------ANAC58                          ----------->GT1    ----- --------CBF --------->YAB1        <---------ANAC58     <-----------GT1 <---------AHL20(2)      <---- ---YAB1    <---------YAB1   --------->MYB46(3)<-------TEIL             --------->AHL20(2) --------->MYB52(1)   ttgcaggtggatttatcagagtgttgtgctaacaaatgggtgccaaaggttcgatttttatccagtttttggatttatattgtaattagagcttaaggga  7935400                                                                                             <-------                                            --------->ALFIN1                                 --------                                          <---------ANAC58                                  <--------                                          <---------ANAC46                            --------->At4g35610      --------->YAB1                      <---------ANAC58                     <---------TOE2(3)     ----------->GT1                   --------->DAG2                      --------->ZAT2   <--------    <---------WOX13(1)           ----------->GT1                           --------->At4g35610 ---->ARR14(2)   --------->AHL20(2)   ---------->DOF2                      <---------At4g35610 -----ARR14(2) <----------DOF2<---------At4g35610               --------->ANAC46 <------ZmHOX2a(1)   ttcgagattgataaacactttaaatcaaatgtagatgataaaaagcgtgtgaagaagttgaaatctaagaaactagaagctgaggaagagctcaataatg  7935500 --------->ANAC58                                            ----------->GT1       <---------At4g35610 --------->ANAC46                                 <---------ANAC58                 --------->At4g35610 --------->ANAC58                                 <---------ANAC46                --------->GLK1(2) --ICU4        <-------MYC3         ---------->DOF2 --------->ALFIN1         --------->At4g35610 ->YAB1        ------->MYC3       --------->At4g35610      <---------------------WRI1 -ATHB51     ------->TEIL      --------->At4g35610--------->ALFIN1        ---------->DOF2<------ZmHOX2a(1) -ATHB12  --------->AtLEC2     <---------At4g35610<---------ANAC58--------->GLK1(1)--------->ZAT2   ttcaagaaatcgatgcacatgatatagtaatggagcagaagagcgataagaagcgtgggaagaaggtgaaatctaagaaagcagaagctgaggagcatga  7935600                                                  <---------ANAC58                                                  <---------ANAC58                                                  <-------GAMYB             <---------ZAT6                                                 <---------MYB46(3)  --------->AHL20(2)                                                 <------MYB46(1)     <---------AHL20(1)                                                 <------MYB83        --------->AHL20(1)                                                <---------AtMYB61 --------->YAB1  <---------ARR11(3)   --------->DAG2           --------->MYB59  --------->ICU4  --------->ARR11(3) ---------->DOF2         --------->ATHB12    <---------YAB1                   <--   agaagagcttaagaggcttcaagaaaaggtgagtcatctatgaaacatgtttggttgcgatattgtaatgatatattagtggaaagttgagttttttttt  7935700                              ------>ZmHOX2a(1)                            ------>ZmHOX2a(2)                           <------ZmHOX2a(2)           <---------AHL20(2) <---------YAB1         <---------RVE1(1)<---------ARR11(3)        --------->ARR14(2)<---------ARR14(2)        <---------ARR14(2)--------->ARR11(3)        <---------GLK1(2) --------->ARR14(2)     --------->ANAC55(2)  <---------ARR14(3)     <---------ANAC55(2)  --------->ARR14(3)    <---------LBD16      <------ZmHOX2a(1)   --------->MYB52(1)  <---------TOE1(2)         ---------->DOF2 <---------DAG2      --------->LBD16        <---------ARR14(2) <----------DOF2    <---------ANAC46        --------->ARR14(2)                                  <---- ---------GT1      <---------LBD16    <-----------GT1                                          <-----   taactttacggatttttttgttccgcaggatcctgatttttttcagtatatgaaagagcatgatgcagagcttctaaagtttgatgctactgaaattgag  7935800  Previous    Next  AGI:  At2g18220.1    Description:  Identical to Nucleolar complex protein 2 homolog [Arabidopsis Thaliana] (GB:Q9ZPV5); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55510.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81729.1); contains InterPro domain Protein of unknown function UPF0120 (InterPro:IPR005343) Range:  from: 7935336    to: 7938933    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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