Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ---------->DOF2                        <----------DOF2                       <---------------AGL15                       --------------->AGL15                      ----------------->AGL1                      ----------------->AGL2                      <-----------------AGL2                ------->TEIL                          ---                      <-----------------AG             <-------GAMYB                           ------                      ----------------->AGL3          --------->LBD16                          ------                      ===============================================================================                      <-----------------AGL3 ------>ZmHOX2a(1) <----------DOF2               --------           <---------MYB52(1)<---------HSFB2a(2)    <---------LBD16          ----------->GT1 ========         <---------MYB46(3)  --------->HSFB2a(2) <----------DOF2    <----------DOF2   <-----------GT1   tttttttgtagccgttgatttcattccttttttagaaagtggtcttcctctctttccggttgaatcttttctttttgtaatgtaaaatttactgaccaag  7864200                                                    <---------ANAC46                                                    <---------ANAC58                                                    <---------ANAC58                                                   <-------TEIL                                                  <---------ANAC46      <---------DAG2                      --------->At5g28300 ------->DOF2                            ----------->GT1 --->ANAC58                       <---------------AGL15 --->ANAC58      <----------DOF2  --------------->AGL15 ========MADS_MADS               <-----------------AGL2                                       <------ ------->AGL15------>NtERF2    --------->AtLEC2<-----------RAV1(1)                        <---------RAP2.6(2) =================================================MADS_MADS          <-------TEIL     <---------ZAT6   aaaagaaaccttttgcctcctttgattttgttcatgctaagtatggtaaatggtgcgtttggaaaactagattcaaaaaatgtcgttagagttcggcttt  7864300                                                                              <---------ICU4                                                                    <---------ANAC58                                                                    <---------ANAC46          <------                                                                    <---------ANAC58  --------->HSFB2a(2) <---------YAB1      <------------CBF                         ------>ZmHOX2a(1)       <---------HSFB2a(2) ----DOF2      <---------At5g28300    <----------DOF2<------------CBF      --------->YAB1    --------   attctgatcaacattttcactgcgattgtgtcattttcaactttgtctcatgccttattgcatcctagtagcgtttctcataatgtctccagaagccgct  7864400                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                                  <---------ANAC46                                                                                  <---------ANAC55(2)         ------------>CBF                           ------>ZmHOX2a(1)             ----------->GT1     --------->RAP2.6(3)                      ------->TEIL                        --------->ANAC55(2)   ----------->HVH21                       <---------YAB1            <------------CBF --------->ANAC55(2)                    <------ZmHOX2a(2)           --------->ATHB12 <---------ANAC55(2) ----------->GT1    ===================HOX2a_HOX2a      --------->ICU4 ---RAP2.6(3)       <---------TOE2(3)  <---------ARR11(3) <-----------GT1   ------>ZmHOX2a(1) ->RAP2.6(2) <---------ATHB12          --------->ARR11(3) ------->TEIL    <-----------------AGL1   <-   attacatgacgaccaatgaactatggtttaatcaaaccctagatcatgaatctcctaatgtaacttctcttcattgtcctgatttcgtaattttgtccaa  7864500                                                                --------->ANAC46                                                               <---------LBD16                                                            <------ZmHOX2a(2)          <---------TOE2(3)                                <---------ARR11(3)          <---------TOE1(3)                                <-----------ARR10    --------------->AGL15                                  <-----------HVH21    <---------------AGL15                         <------------CBF                          <-------- ------->TEIL <-------TEIL          --------->CCA1(2)     <------ZmHOX2a(1)               ------->TEIL ------TEIL  <--------P    --------->YAB1        --------->ATHB12--------->LBD16       <---------YAB1   atgcatctatttgaggtagattatttgaatcatatgagatttgaaacttagttattgacaggatcaccgcaaattcagacagcgatactatgaatttatg  7864600                                                     ------>ZmHOX2a(1)         --------->AHL20(2)                                                    <---------ANAC58           <---------AHL20(2)                                                    <---------ANAC46       --------->AHL20(2)                                            ----------->HVH21             <---------YAB1                                            --------->ALFIN1            <---------ICU4                                           --------->At5g28300          --------->YAB1                                          <---------ANAC46              --------->ATHB12                                        <---------LBD16                 -------->HAHB4             <-----------RAV1(2)  <---------YAB1    <---------ANAC58   --------->ICU4        <-------   <----------DOF2              --------->YAB1   <---------ARR11(3)    <---------ATHB12  <---------ARR11(3) -AHL20(2)------>ZmHOX2a(2)    <---------YAB1    --------->ARR11(3)    <---------YAB1    --------->ARR11(3)   gactactttcgatctccagatgggcctatgtttatgataatatgcggtgaaggtccttgtagtggcatagctaatgattatataaatgtaagattttaca  7864700                  --------->GLK1(2)                 --------->RVE1(1)       <---------YAB1           <---------TOE2(3)     <---------ICU4          <---------WOX13(1)                                        --------->ZAT6    --------->ICU4--------->ARR11(3)                                             <---------AtMYB61    <---------YAB1<---------ARR11(3)                                       <-----------RAV1(2) <---------YAB1--------->AHL20(2)                                        --------->ANAC46    <<<<<<<ZML2 ----GT1----------->GT1 ---------->DOF2                      ---------->DOF2   --------->ALFIN1 -----   aatttgattattgtaaaaaaaatctaaaaagattgatgttttataaacatatataggtattagcaaagaagtttcaagcaggtgtggtttcactagaaca  7864800                      <----------DOF2                                --------->ANAC58                  <---------ALFIN1                      <----------DOF2       <---------YAB1            --------->DAG2                           --------->ARR11(3)   <---------DAG2           ---------->DOF2                          <-----------GT1  --------->ANAC58         <------ ---->TOE1(2) --------->At4g35610 --------->At4g35610<---------ARR11(3)   <----------DOF2 <----------DOF2   taggtactatggaaaaagctccccctttaactcattagctacagaaaatttgaaatacctttcatcgaaacaagccctttacgatttggcatctttccga  7864900                       <---------ANAC58                       <---------ANAC58                   <---------ANAC46                   <---------ANAC58            --------->ANAC58            --------->ANAC58        --------->ANAC46                          --------->YAB1                            ---------        --------->AtLEC2                       <---------CCA1(2)              <---------AHL20(2)        --------->ANAC58     <----------DOF2=========================HOX2a_HOX2a           <---------ANAC46        --------->ANAC58<----------DOF2     <------ZmHOX2a(2)                 --------->AHL20(2)  <--   <-----------GT1 <---------ANAC58        --------->ARR11(3)     ----------->GT1   <------ZmHOX2a(1) ---ETT(1)<XXXXXXXXXXXXXXXXXXXXMIR169H-N   <---------ARR11(3) <------ZmHOX2a(1) ---------->DOF2 -----   caatattaccaggcaagtcttgcttgctttacttttatttagtgagatcatatcatatgctagaggaatggtgactacatttaaaaggatgtttcatgta  7865000                                                                                    <---------LBD16                                                                                   <---------LBD16                                                                        --------->LBD16                                                                       <---------ANAC58                                                                    --------->GLK1(2)--------->HSFB2a(2)                                                                    --------->ARR14(2)             <-       --------->ATHB12                                        <---------ZAT6   <<<<<<<<<TBF1<-------      <---------YAB1                                      <---------MYB46(3)--------->ARR14(2)     --    --------->YAB1                                       <---------AtMYB61  <---------ARR14(2)    <--   <---------YAB1       --------->GLK1(2)              <---------MYB46(3) <---------MYB46(3) <------- ------>AtSPL8         <---------GLK1(2)              --------->ALFIN1 <---------ANAC58     <-------- --------DOF2         <------ZmHOX2a(1)               <---------AtMYB61<---------ANAC46  --------->GLK1(1) -->TEIL         <---------REM1(1)--------->YAB1      <---------ZAT6<---------ARR14(2)   <---------GLK1(1)   cttttattatgatttgtggatgtaggaatctctgaataagaagttgaatataagtagtggtggtagtgacaatccgtggttcttcttcgggatttcttat  7865100  Previous    Next  AGI:  At2g18080.1    Description:  EDA2 (embryo sac development arrest 2); serine-type peptidase. similar to serine carboxypeptidase S28 family protein [Arabidopsis thaliana] (TAIR:AT4G36195.2); similar to serine-type peptidase [Arabidopsis thaliana] (TAIR:AT4G36190.1); similar to serine carboxypeptidase S28 family protein [Arabidopsis thaliana] (TAIR:AT4G36195.1); similar to unknown [Populus trichocarpa] (GB:ABK95760.1); contains InterPro domain Peptidase S28; (InterPro:IPR008758) Range:  from: 7864598    to: 7866797    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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