Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->ARR11(3)                                                                                --------->REM1(2)                                                                               ----------->HVH21      <---------LBD16           <---------ANAC58                <---------HSFB2a(2)     <---------ARR11(3)     <---------ANAC58           <---------ANAC46                --------->HSFB2a(2) ----------->GT1     <---------ANAC58           <---------ANAC58 <---------At4g35610         <---------ANAC58     <---------ANAC46          <-----------------------TaNAC69(2)            <---------ANAC58    <-------TEIL      ---------->DOF2            --------->At4g35610         <---------ANAC46       < ---->GT1           ----------->HVH21 ------>ZmHOX2a(1)--------->ANAC46    <---------ANAC46         <   attaagttcgtggaagacatggctgaaagaggttgcgttcctgatacagagagctacaatccattgctcgaagagttgtgcgtgaagggtgatattcaga  7633000         <----------DOF2         <---------DAG2                                                                             -        <---------ANAC58                                                                            -        <---------ANAC58                                                                            -     <--------P                                                                                ------    <---------ANAC58                                                                           ------    <---------ANAC58                                                                        ---------    <-------GAMYB                                             --------->ZAT18              --------->RAP2.6(2)   <------MYB83                                               <---------ZAT14              --------->ANAC46   <---------MYB46(3)   <---------ANAC46                      --------->ZAT14              --------->ANAC58   <------MYB46(1)   <---------AtMYB61                      <---------GLK1(1)              --------->ANAC58 ---------ANAC58 --------->ANAC58                ------>ZmHOX2a(1)              --------->ANAC46    - ---------ANAC58 --------->ANAC58              ------>ZmHOX2a(2)    <---------TOE2(3)  ---------->DOF2   aggcttggttgcttttctcacgaatggtggagaagagtattgtccctgatccttctatgtggagttcactgatgttttgtctcagccagaaaaccgcaat  7633100                                                                                                 <---          ------>ZmHOX2a(1)                                          --------->At4g35610         ---- -------->ANAC55(1)                                            <---------ICU4              <---------ICU4 -------->ANAC58                                              <---------YAB1               -------->HAHB4 -------->ANAC46                                             --------->ARR11(3)           --------->ICU4 --->ANAC58--------->ATHB12                                  <---------ARR11(3)           <---------ATHB51 --->ANAC58<---------ICU4      ----------->GT1    ----------->HVH21  <---------At4g35610--------->YAB1 >LBD16   <---------YAB1     ---------->DOF2    ----------->GT1--------->ATHB12      <----------DOF2 -------->ANAC58   <------ZmHOX2a(1)---------->DOF2         --------->YAB1        ------>NtERF2 -----   ccacgtaaactcctcattgcaggacataatccaaagttaaaagctagaggcagtgacataaatgatcattgagctcgaacttgaggcctttaataatgca  7633200                                          <------ZmHOX2a(2)            <---------ARR14(2)                                         --------->ARR11(3)    <----------DOF2       <---------ARR14(2)        <---------ZAT2            <---------ANAC58         <----------DOF2       --------->ARR14(2)       --------->ANAC58           <---------ANAC58    ---------->DOF2    --------->MYB46(3)          --------->ANAC58       <---------MYB52(1) ----------->GT1  ----------->RAV1(1)        --------->STY1(2)      <-------TEIL       --------->ARR14(2) ------At4g35610             <---------STY1(2)    <---------SPL7       --------->GLK1(2) ----->At4g35610            --------->ANAC58    <---------------AtSPL8 --------->ARR11(3)    -------- -->TEIL                    --------->ANAC58    <---------------AtSPL3 <---------ARR11(3) <----------ARF1   tctgcaacaaatacgaagatggctccaaactagcaagcagagagatcaagatggtacgtttgcttcttttgaaaatctgttaaaagctttgggagaaaag  7633300                        <---------ARR11(3)                        --------->ARR11(3)                        <---------GLK1(2)                        --------->ARR14(2)                                                          -              --------->At4g35610                             <------------CBF                      -            --------->YAB1    <-----------GT1            ----------->GT1        ----------->GT1     - -->DOF2---------->DOF2 <---------ARR14(2)       ----------->GT1        --------->TOE2(3)        <---   gagaatgcctaaaatcagaagaggcagattttaaacaagaccatgagagaagggcaaaatggagaattggacatcgtcaaaatgggaaaatgtttgaagc  7633400         --------->AHL20(2)                           <---------ANAC46         --------->YAB1                               <---------ANAC58    ------------>CBF                             <---------ANAC58                           ---------    <---------ATHB12                             <---------ANAC55(2)                        <-------- --------->MYB46(3)       ----------->GT1*TSS    <---------ANAC58                         <---------HSFB2a(2) -------->ANAC58         <------ZmHOX2a(1)       --------->ANAC55(2)           <-----------GT1 -------->ANAC46 <------ZmHOX2a(1)   <------ZmHOX2a(1)<---------ANAC58        <---------CCA1(2) -------->ANAC58<----------ID1  --------->DAG2  <---------TOE1(2)          <----------DOF2--------->HSFB2a(2) ------ZAT18 ---------->DOF2   ---------->DOF2  <---------TOE2(2)------>ZmHOX2a(1)    <----------DOF2   acacccatcaataaaaaaaggacaagaggagcaaaaagaggagagagtcttacgtttcgtgctattcctctctctctcttttatctctctttctcgagaa  7633500                              <------ZmHOX2a(2)                       <------ZmHOX2a(2)                             --------->ARR14(2)                   --------->ANAC55(1)                             --------->AGP1                       --------->ANAC58        --------->DAG2       <---------ARR14(2)                   <---------ANAC55(2)               <       --------->DAG2        <---------ARR11(3)                   --------->ANAC55(2)               <      ---------->DOF2        --------->ARR11(3)                   --------->ANAC46                  < ---------->DOF2         ---------->DOF2                          --------->ANAC58             ------ >HSFB2a(2)      <----------DOF2                                 <---------LBD16              ------- -HSFB2a(2)<---------RAP2.3(3)--------->CCA1(2)        ----------->RAV1(1)  <----------DOF2   <------   aactaaagaaaagggggctcttttattcaaagatccaaactttgacaattcaaaatccaacatagaacacggatcaagctttcaaattcagacagagata  7633600                          <------ZmHOX2a(1)                       --------->At4g35610                     <-----------RAV1(2)                    <------ZmHOX2a(2)                                 --------->ANAC46           ================HOX2a_HOX2a                       --------->ALFIN1           ------>ZmHOX2a(1)                              --------->DAG2        --------->GLK1(2)   -          --------->TOE2(3)                              --------->DAG2        <---------GLK1(2)   -- ---------ANAC58    =============HOX2a_HOX2a            ---------->DOF2    <---------MYB52(1)      <- ---------ANAC46   <-----------HVH21                 --------->TOE2(3)--------->ANAC58           <--- ---------ANAC58--------->HSFB2a(2)                 ----------------->AG  <-------GAMYB          ---- --->CCA1(2)  ----------->RAV1(2)                  <---------At5g28300--------->ANAC58           <--- -->ARR11(3)  --------->At4g35610               <---------ANAC58 <---------GLK1(1)               <--- ---ARR11(3)  <---------At4g35610               <---------ANAC58 --------->GLK1(1)              <----   tgtcgtgttcatcctcatctggatcagaggaagacgatgagggtttcgatgcttaccgtaaaggtggatatcacgccgttagaatcggagaccagtttgc  7633700      <---------MYB52(1)           ------>NtERF2     <---------RAP2.6(3)        <------MYB46(1)     <-------GAMYB              <------MYB83    <---------MYB46(3)         <---------MYB46(3)  <------NtERF2                --------->ALFIN1 ------>NtERF2                <--------P                              --------->ANAC58         ====== -------->ALFIN1             <-------GAMYB                            --------->ANAC58<---------CCA1(2) ------->ATERF1(1)           <---------ANAC58                   --------->YAB1       ------->TEIL --------MYB52(1)            <---------ANAC58              <---------ANAC58       --------->ANAC46 <- ------DREB2C(2)            <------MYB83                   <---------ANAC58       --------->ANAC58 -- ----->ATERF1(2)            <---------MYB46(3)         <---------ANAC58           --------->ANAC58<-- ------ATERF1(2)            --------->ATHB12           <---------ANAC58 <---------ALFIN1       ------ ------DEAR3(1)             <------MYB46(1)       <---------MYB52(1) ----------------------->TaNAC69(2) -----LBD16          ---------->DOF2         <---------ALFIN1  <---------YAB1  <---------SPL7  ======   cggtggccgttacattgctcagagaaagcttggttggggccaattctccaccgtttggcttgcctatgatactcgcacttctgtacgcatctctctcctt  7633800                                    <---------GLK1(2)                         ------>ZmHOX2a(2)      <----------DOF2   <------ZmHOX2a(2)     <---------ANAC58  <---------ARR14(3)     <---------ANAC58  --------->ARR11(3) <---------ANAC58      <---------ARR11(3) <---------ANAC58      <---------ARR14(2) ===============================HOX2a_HOX2a   <---------ANAC58 --------ARR11(3)      --------->ARR14(2)     <---------ANAC55(2) ------->ARR11(3)      --------->ARR14(3)     <---------ANAC46                                  ----- -------CCA1(2)        <---------AGP1         ----------->GT1            <---------MYB52(1)     <---- >ZmHOX2a(1)           --------->AGP1--------->GLK1(2)            --------->KAN4(2)             ----- ==============================HOX2a_HOX2a    <---------ANAC58   <----------TaMYB80        <---------   atatcttgctttactatgccaacaagatcttaaatgcagaatttgatttcgtaaatttgttttaagcatgttcccgttagtcttctctaattcctttcat  7633900  Previous    Next  AGI:  At2g17525.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G74580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40387.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 7630908    to: 7633268    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g17530.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G35500.2); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G35500.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70006.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71710.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 7633441    to: 7636231    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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