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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                             -------
                                                                                            >>>>>>>>
------ZAT18                                                                ----------->GT1  ------->TEIL
----->ZAT18                                ---------->DOF2           ---------->DOF2<----------DOF2
----->ZAT14                              --------->ANAC58      ----------->GT1   <---------ARR11(3)
------ZAT14                              --------->ANAC58     --------->DAG2     --------->ARR11(3)
----GT1                        ----------->GT1               ---------->DOF2 ----------->HVH21
 
gtactagttgttatttcaacgtagacataccaaaatgtttattcaagaaagcctatatactagcaaaagtaaaaaagaatgtgacatctttgatgaacca  7523100
                                                                         <---------ARR11(3)
                                                                     <---------ICU4
                                                                     --------->YAB1
                                                                    <---------ATHB12
          --------->YAB1      <---------HSFB2a(2)                 --------->WOX13(1)      <---------
  ---------->DOF2             --------->HSFB2a(2)               <---------MYB52(1) <-----------GT1
-->MYB46(3)     --------->AHL20(2)                            ----------->GT1     --------->AHL20(2)
>>>>>>>>>LFY    <---------AHL20(2)                           ------>ZmHOX2a(2)--------->AHL20(2)
 
atgtgaaaagtcaacataataaaacttgagttttcagaacaaatttagttgtccattgtttcgatctgttaatcaagaccataaattaactcttaactat  7523200
                                                                                  <---------ICU4
                                                                                  --------->YAB1
                                                                                 <---------ATHB12
             --------->ARR11(3)                                                  <---------YAB1
             <---------AHL20(1)                                     --------->TOE2(3)
             --------->AHL20(1)                                     --------->TOE1(3)
          --------->AHL20(2)                                      <---------TOE2(3)
          --------->YAB1                                          <---------TOE1(3)
       <---------ICU4    <---------At4g35610                  --------->YAB1     --------->ICU4
 <---------At4g35610     --------->At4g35610                ----------->GT1    --------->YAB1
------->TEIL <---------AHL20(2) ---------->DOF2        --------->DAG2         <---------YAB1  ------
--GT1  --------->YAB1   --------->MYB59               ---------->DOF2<---------MYB52(1)       <-----
 
atgcatctaataataatattttgtagttagctaagttaagcacatccaactcttaaaaaaagctagtataacgttaggcttataatcattctcttaataa  7523300
               --------->ATHB51
               -------->ATHB1                                                                 <-----
               --------->ATHB12                                                              -------
               <---------ICU4                                                              ---------
              <---------AHL20(2)                                                       <---------AHL20(2)
              --------->ICU4                                                           --------->AHL20(2)
      ------>ZmHOX2a(1)     <-----------GT1                                           --------->AHL20(2)
     --------->TOE2(3)     <---------AHL20(2)        <---------ICU4                   <---------AHL20(2)
     --------->TOE1(3)  <---------AHL20(2)           --------->YAB1             --------->TOE2(3)---
   <---------YAB1       --------->AHL20(2)           <--------HAHB4           ------>ZmHOX2a(2)  <--
--->YAB1      --------->AHL20(2)     <XXXXXXXXXXXXXXXXXXXXMIR168A/B       <---------YAB1  --------->ZAT6
----ICU4      <---------ATHB51  <-----------GT1     <---------YAB1---------->DOF2  --------->AHL20(2)
 
taagttatcctaaacaaattattgcaattttttattctccctacttgcactaagtatcattacaccagtaaaagatgatgatcccttaaattaatactaa  7523400
             <------ZmHOX2a(1)
    ------------>CBF                             <----------DOF2                          <---------ARR14(2)
   --------->ANAC58                       ---------->DOF2                                 --------->ARR14(2)
   --------->ANAC46                   <---------ANAC46              ------>ZmHOX2a(1)    --------->GLK1(1)
   --------->ANAC58                  --------->LBD16           --------->AtMYB61     <-----------GT1
----ICU4   <---------TOE2(3)     --------->ARR14(2)         <-----------GT1  --------->REM1(1)
-->ICU4    <---------TOE1(3)     <---------ARR14(2)     <----------DOF2    ------>ZmHOX2a(1)
>YAB1 --------->WOX13(1)      --------->ANAC58--------->ARR11(3) ------>MYB83--------->YAB1      ---
------>AHL20(2)               --------->ANAC58<---------ARR11(3) ------>MYB46(1)<---------ICU4  *TSS
-------AHL20(2)              <-----------------------TaNAC69(2)<---------ALFIN1<---------YAB1  -----
 
ttaaacaagcaattaaggaatgaagaaggtgagacgaaaccgcgtaaaagacctttcttctttgcaccatcctctctccttcatcatttcacaaatccac  7523500
                                                    --------------->AGL15
                                     <---------ARR14(2)
                           -------->HAHB4          ----------------->AGL2
                           --------->ATHB12       ------>MYB46(1)
                           <--------ATHB1         -------->P
                          <---------ATHB12        ------>MYB83
                          <---------YAB1         ------>MYB83
                          --------->ICU4       --------->MYB46(3)
                --------->ZAT6       ------->TEIL------>MYB46(1)            --------->CCA1(2)
     --------->WOX13(1)  <---------TOE2(3)     <---------MYB59             <---------ARR11(3)
  --------->GLK1(2)     --------->YAB1        --------->ANAC46             --------->ARR11(3)
------->DOF2  <-----------GT1        --------->GLK1(2)          <---------ALFIN1              ------
---->ANAC46  <-----------GT1         --------->ARR14(2)       ----------->RAV1(1)     --------->AHL20(2)
 
aaaagaatcaatctttttaacactctctaatgattcaacgaatccaattacccaaccagaaacagcaacacatatagagatatatactattaaacaataa  7523600
                                                                 ------>ZmHOX2a(1)
                                                                 <----------DOF2
                                                              <---------YAB1
                                                             <-----------GT1
                                                            --------->YAB1
                                                         <--------HAHB4                 <<<<<<<<<TBF1
                     <----------DOF2                     --------->YAB1            <---------CCA1(2)
       <-----------GT1    <---------YAB1                 <---------ICU4       ---------->ID1
  ---------->DOF2---------->ID1                         --------->ICU4        <-----------GT1
--->AHL20(2)    <-----------GT1                         --------->AHL20(2)   <-----------GT1  ------
 
cataacaaagaaaccattttttctcttttgttattgacttaaacaaaaactatcaacgaataattatccttttttgagtttttcccatttcttcttcgtc  7523700
                                             ------>ZmHOX2a(1)
                                           ------>ZmHOX2a(2)
                                          <------ZmHOX2a(2)
                                         --------->AGP1
                                         <---------ARR14(2)
                                         <---------ARR11(3)                  <---------ICU4
                                         --------->ARR14(2)                  --------->ATHB12
                                         --------->ARR11(3)                 <---------ATHB12
                                         <---------GLK1(2)                ------>MYB83
                                  <---------MYB52(1)                 <-----------GT1             <--
                                 --------->LBD16                 <---------AHL20(2)         <-------
                               <---------LBD16                   --------->AHL20(2)     <---------AHL20(2)
                   ----------------------->TaNAC69(2)          <----------DOF2          --------->AHL20(2)
---->ID1         <----------DOF2--------------->AtSPL3  <---------TOE1(2) ------>MYB46(1)  <--------
 
tccatttcatcgtcttctcgctgttctgctatattccggtactagatcctctgttttctcatgtttcttttattaccaaatgatttcttcatttattgtt  7523800
                              ------>ZmHOX2a(2)
                              =====================================HOX2a_HOX2a
                           -------->HAHB4
                           --------->ATHB12                            <----------DOF2
                          --------->ICU4                      <---------GLK1(1)
                          <---------YAB1                      --------->GLK1(1)
                    ------>ZmHOX2a(2)                    <---------LBD16
 <----------DOF2   <------ZmHOX2a(2)          --------->TOE1(2)--------->ARR11(3)
-------ANAC46     <---------ARR11(3)      ---------->DOF2<-----------RAV1(2)   --------->TOE2(3)
----RAV1(1)       --------->ARR11(3)------->TEIL     <----------DOF2 ---------->ID1              <--
-YAB1    <----------DOF2--------->YAB1   <---------AHL20(2) <------ZmHOX2a(1)  <----------DOF2<-----
 
gtgtctttgattcttttttgggatctataatgatcgatgaacatttaaagctacgacttttcaggagctcttgtctttttttctttaatctttgattatg  7523900
                                  --------->ALFIN1
                                ====================bZIP_DOF
                                <---------O2
                                <---------bZIP60(2)
                                <-----------RAV1(1)
                                <---------TGA1a
                                <---------ANAC46
          <---------YAB1     ----------->HVH21                             <---------ANAC58
       --------->ICU4       ------>ZmHOX2a(2)                              <---------ANAC58 <-------
       <---------ATHB51    <---------At4g35610   <---------ANAC58         <------------------------ANAC81
---------GT1              <---------AGP1 <----------DOF2           <---------DAG2<----------DOF2 <--
----YAB1--------->YAB1    <---------ARR11(3)     <---------ANAC58  <----------DOF2   <---------At4g35610
 
ttacaaaacaattatgttttttgaagcttgatctgatgtgggttctttgatttcgttccaaagtttgatacttttttggcttctctttatctgatttttt  7524000
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AGI:  At2g17290.1   
Description:  CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); calmodulin-dependent protein kinase/ kinase. similar to CPK5 (CALMODULIN-DOMAIN PROTEIN KINASE 5), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G35310.1); similar to CPK1 (calcium-dependent protein kinase isoform AK1), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G04870.1); similar to CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G10660.1); similar to putative calcium dependent kinase 6 [Brassica rapa subsp. pekinensis] (GB:AAZ32752.1); similar to calcium
Range:  from: 7523497    to: 7526715    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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