Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ANAC58                --------->ANAC58                --------->ANAC55(1)                <---------ANAC55(2)           --------->ANAC46           --------->ANAC58           --------->ANAC58  --------->ANAC58                                         --------->AtMYB61        --------->TOE1(2)    --------->ANAC58                                         --------->YAB1  --------->YAB1--------->ANAC46 --------->MYB46(3)                                 ----------->RAV1(1)  --------->TOE1(3)      --------->YAB1                                           --------->MYB46(3)  --------->TOE2(3)    ------->TEIL  <---------ATHB12                        --------->HSFB2a(2)  <<<   cgaaccataaactacgacacgcatgaatcacaagaaccaatgttgaagtattaggctcaaaaccccaaactctcaacttcgaaaaccaccataacccttc  7494300                                                        --------->HSFB2a(2)                                                   --------->ARR14(2)                                                   <-----------ARR10                                                   <---------ARR14(2)                                                   <---------ARR11(1)                                                   ------->TEIL                                                   --------->GLK1(2)                                                  <---------CCA1(2)                                                  <---------ARR14(1)                                                  <---------GLK1(2)            --------->ANAC55(2)               --------->HSFB2a(2)             --------->ANAC58                --------->ANAC46        --------->YAB1                         --------->ANAC58           <---------GLK1(2)        --------->TOE1(3)                 --------->ANAC46             --------->YAB1        --------->TOE2(3)                 --------->ANAC58             --------->AHL20(2) <<<<<<TBF1    <---------HSFB2a(2)        --------->ANAC58            <<<<<<<<<ARR2    --------->LBD16   ttcttcaaaaccataatcgagaagcccaaaaacgataacattccaagacaccgaatctctcgaattcatacaatcaaattctcgtaacccagaacacaag  7494400                                                                                           --------->TOE2(3)                                                                            <---------ANAC58                                                                            <---------ANAC46                                <-----------------------TaNAC69(2)          --------------------->WRI1                               --------->ZAT18                              <---------ANAC58      ---                <---------GLK1(1)            ---------->DOF2         ------->GAMYB       ------->TEIL <---------ALFIN1            <---------GLK1(1)                 <----------DOF2           -------->P   tctccacatttcatatagaaatcagcaattgagttccctacagaaacaaaagactcaaaacctctctttaacagacttgcttgaatacatctaccttgaa  7494500                                                       <---------AHL20(2)                                                    <-------GAMYB                                                    --------->TOE2(3)                                                    --------->TOE1(3)                                                   ------>ZmHOX2a(2)                                                   ----------->GT1                                                 --------->ARR11(3)                                                 <---------ARR11(3)                                                 --------->ARR14(2)          ------->TEIL                      <----------DOF2            <---------ARR14(2)         <---------CCA1(2)                   --------->ANAC58         ---------->DOF2         <---------At4g35610         <---------At4g35610              --------->ANAC58          <---------ZAT2         --------->At4g35610<<<<<<<<<<<<<<<<<LFY<------ZmHOX2a(1)   --------->ZAT2               <--- ------>MYB46(3)   --------->ANAC58       --------->ANAC58          --------->At4g35610    --------->LBD16   acagccatgagagcttagcacaagctttaaaaacaatggggaaaacgaaaggatcgttaaattgaactccagctctctgtatctctgaatacccagagac  7494600                <---------MYB52(2)              --------------->AGL15              <---------------AGL15              --------->ZAT6  <---------ANAC58            <----------DOF2     ------>NtERF2            <---------ANAC58            ====================bZIP_DOF     --------->LBD16      <---------ANAC58            <---------CCA1(2)    --------->ANAC58      <---------ANAC58            ---------->ID1        ------>ZmHOX2a(2)    --------->ANAC46     <---------HSFC1(2)       <---------ANAC58  --------->TGA1a             -----    --------->ANAC58     --------->HSFC1(2)       <---------ANAC58  <---------TGA1a<---------YAB1   <---------LBD16--------->MYB52(1)          ================================bZIP_DOF       -------- ------ALFIN1----------------->AGL2           ---------->DOF2       =================================   cacttcccgccattttccactaacagaagcttgcttaatcttcgaagacaaagcttgtagctttgaacacaagtgtgatcccattaccatacttcaaacc  7494700                                                --------->ARR11(3)                                             <-----------TBP                                           <---------ANAC58                                           <---------ANAC58    ----------->GT1                                    ------------>CBF --------->YAB1    <---------TOE2(3)              <<<<<<<<<<<<<<<<<LFY   <---------YAB1   ---------->DOF2             <---------ANAC58 <---------AHL20(1)          --------->YAB1 <---------MYB52(2)            <---------ANAC58 --------->AHL20(1)      <----------DOF2   <---------At5g28300 ---->AtMYB61       <----------ID1--------->ZAT18 <------------CBF     <---------DAG2    <-----------GT1 ->ANAC46      <----------DOF2 <---------ANAC46<---------CCA1(2)    <-----------GT1 ----------->GT1 =============bZIP_DOF     <------------CBF<---------ANAC46  <---------MYB52(1) --------->GLK1(2)   acaactaaagtttgaagctttaacaacaaaattgtgtgaacaatggcttatatattgatgaccattagttaaaccttttcataatctggtttaaccgttt  7494800                      --------->ZAT6                    ------>MYB46(1)                    ------>MYB83                  --------->MYB46(3)                  <---------MYB46(2)                  --------->AtMYB61                  <---------MYB111(1)                 --------->ANAC46                 --------->ANAC58           ----------->RAV1(1)               --------->ANAC46            --------->REM1(1)                                   ------               --------->ANAC58           <-------TEIL                                         ------               --------->ANAC58       --------------->AtSPL8                             --------->YAB1             <---------ALFIN1   --------------->AGL15                                   <---------YAB1             --------->ANAC46   <---------------AGL15      <----------DOF2--------->TOE1(2)    ------ ----------->GT1 --------->ANAC58     <---------------AtSPL8              --------->TOE2(2)  --------   aagtagttatattacacacaccaaacactacatactaatacaggtacaacatttgttttctctttcatgtagtatacatacgaatgggttttgataatct  7494900                                                              ------->MYC3                                                              <-------MYC3                       ----                                                   <---------ZAT2          --------->ANAC58    <-----                                                   --------->ZAT2          --------->ANAC58    <-----                                                   <---------At4g35610    <---------------------WRI1                                                   --------->At4g35610   <------ZmHOX2a(1)     <-----                                                 --------->ZAT18      <---------HSFB2a(2)     <------ --->TOE2(3)          --------->GLK1(2)          <---------ZAT18      --------->HSFB2a(2) <---------MYB46(3) --->YAB1             <-----------ARR10   --------->ZAT6     --------->ANAC55(2)          <---------REM1(1) --->TOE1(3)         <---------GLK1(2)  ----------->RAV1(1)  --------->ANAC58             <---------- ->GLK1(2)       ---------->DOF2     --------->ANAC46        --------->ANAC58 --------->MYB52(1)-----   taacaaatacaaaactaagaaaagaatctcagtgtcttcaaacaacactagtgagctcgagacacgttttgtctaggacgaaacgaagagagttgttgcg  7495000                                                                          --------->HSFB2a(1)                                                                          <---------HSFB2a(1)                                                                          <------NtERF2   <---------ICU4                                                         --------->HSFC1(2)  <---------ATHB51                                                        <---------HSFC1(2)  --------->ICU4                                                          <---------ZAT2 -->NtERF2                                                                --------->ZAT2 ----ANAC46                                                               --------->At4g35610 ----ANAC58                                      <---------TOE1(2)--------->ATHB12 ----ANAC58              <---------MYB46(3)     ------>ZmHOX2a(1)<---------YAB1                     < ---LBD16           <---------ANAC46      <---------ZAT6     --------->ARR14(2)                     - -RAV1(1)        ----------->HVH21  --------->ARR11(3)    <------------MYB.PH3(1)             <------ ---->LBD16   <---------MYB46(3)   --------->At4g35610  --------->MYB52(1)<---------At4g35610 -------   ggcgataatggccttgttgttgacggatggatggggaagctctagtggtccttcgttctaacggtttctcattggcagcttcgatgagttcgagcgattc  7495100                                                                  <---------LBD16                                                             <---------At4g35610                                        --------->ANAC58--------->At4g35610                        <-      <----------DOF2                   --------->ANAC46<-------GAMYB                       <-------- ---------ALFIN1                        --------->ANAC58--------->ZAT2            ---------->DOF2  -- -------->AtMYB61           <---------ANAC58            <---------ZAT2---------->DOF2 ----------->GT1 ---ARR14(2)                <---------ANAC58            <---------At4g35610  --------->ARR14(2)    -- -->ARR14(2)    <---------SPL7 <-------TEIL           <-----------RAV1(2)    <---------ARR14(2)    <-   caccacttctttcatcgatggacggtttttgggttcgggtccaaggcatttcagagccagttgagctactcggaaagcagatttgaaagggtattttcct  7495200  Previous    Next  AGI:  At2g17210.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G18750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47520.1); similar to unknown [Populus trichocarpa] (GB:ABK95971.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 7492480    to: 7494684    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g17220.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G76360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47524.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 7494736    to: 7497249    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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