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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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        <-------GAMYB
        <------NtERF2
       <---------DEAR3(2)
       <---------MYB46(3)
      --------->ALFIN1
      <---------DREB2C(2)                 --------->DAG2
      <---------DEAR3(1)         --------->CCA1(2)
     <---------ABI4(1)          --------->ARR14(2)                                                 -
    ------->GAMYB               --------->ARR11(1)                                                 -
 --------->MYB52(1)             <---------GLK1(2)                                                  -
--------->MYB46(3)              --------->ARR11(3)                                                <-
-------HVH21                    <---------ARR14(2)                                                --
-->MYB46(3)                     <---------ARR11(3)                                        <<<<<<<<<TBF1
------AtMYB77                 ----------->ARR10                                        <<<<<<<<<TBF1
-->DEAR3(2)           <---------DEAR3(1)---------->DOF2                      --------->ANAC58    <--
>ARR14(2)          ----------->HVH21<---------HSFB2a(2)                      --------->ANAC58    ---
-ARR14(2)--------->ALFIN1   ---------->DOF2                      ---------->DOF2 <---------At4g35610
 
tcaacaacggcggtggaaacagacgacggtgtaaagatactggaaaaggtatcgatgggagtatcaacaaaagctagagcaggcatcttcttcttcttca  7160000
   --------->At5g28300
  ----------->GT1
----------->AtMYB77                        <---------MYB52(2)
----------->MYB.PH3(1)                     --------->MYB46(3)
-------->MYB52(1)            >>>>>>>>>GATA-2                                             <---------LBD16
--------SPL7                 <---------ARR14(2)                     --------->GLK1(2)   --------->ALFIN1
----->GAMYB<---------ATHB12  >>>>>>>>>GATA-1                        ------->TEIL      --------->CCA1(2)
-------MYB52(2)              >>>>>>>>>GATA-4        --------->AHL20(2)         <---------MYB46(3)
------>MYB46(3)              >>>>>>>>>GATA-3------->GAMYB----------->GT1    ------------>MYB.PH3(2)
 
acgaacggttacaaatgaattcaaaatttgtggattcaaattttcaacaaacaaaaaaaatggagaaaatgaatctgtgagtttgttagatttgggggaa  7160100
                                                                                  <---------DAG2
                                                                   <---------ALFIN1<----------DOF2
                                                                   --------->DEAR3(1)        <------
                ----------->ARR10                                 --------->MYB46(3)        --------
         ------>NtERF2                                          --------->YAB1  ------>NtERF2-------
        --------->DEAR3(1)                                   --------->WOX13(1) --------->LBD16   <-
       <----------CDC5                                    ------->TEIL         --------->ANAC46   --
       <------NtERF2                                 ----------->GT1   --------->At5g28300  --------
      --------->LBD16                                --------->At4g35610       --------->ANAC58  ---
      ------>NtERF2              ------->GAMYB     <------ZmHOX2a(1)   --------->LBD16  --------->ANAC46
     --------->ANAC46          -------->P       <-----------RAV1(2)--------->AtMYB61  <-----------GT1
    --------->MYB46(3)<---------LBD16 <-----------RAV1(2) --------->GLK1(2)    --------->ANAC58  ---
 
tttgaaacccgccgaggcgaagagcctcggggctaaccccctcagaaggaagcaggaggtgaatctatcaccaccgtgaaacccgccttttacgacccga  7160200
    --------->LBD16
   --------->ANAC46
   --------->ANAC58
   --------->ANAC58             ---------->DOF2
---ETT(1)                   <---------At4g35610
->DEAR3(2)                  --------->At4g35610               ----------->GT1
---->HVH21               <-------TEIL                        --------->ANAC58          --------->ARR14(2)
--------ETT(1)       <---------TOE1(3)                       --------->ANAC58          --------->GLK1(2)
--------->HVH21      <---------TOE2(3)                       ----------->GT1           <---------ARR14(2)
->MYB46(3)          --------->MYB52(1)                     --------->MYB52(1)  <---------HSFC1(2)
------>MYB46(3)     <---------DOF5.7(2)            <---------TOE2(3)           --------->HSFC1(2)  -
------>DEAR3(2)     <-----------GT1  <----------DOF2----------->GT1 <----------ID1 -----------------
 
cccgacccgaaactctccacgattaacgttcagaagaaagcttttttaaaaattttggttaaaaacggaaaaaaacaaatgaagtttccaaatctgtatt  7160300
                                                                                               <----
                                                                                               -----
                                                                                   <---------LBD16 -
                                                                                  <-----------RAV1(2)
                                                                           =========================
                                            --------->HSFB2a(2)         --------->HSFB2a(2)    <----
                                            <---------HSFB2a(2)         <---------HSFB2a(2)    <----
              --------->LBD16             --------->HSFB2a(2)          <---------LBD16         -----
             <---------LBD16         <---------HSFB2a(1)              <---------LBD16          <----
        <---------DAG2               --------->HSFB2a(1)         --------->HSFB2a(1)           <----
----------->RAV1(1)                 <---------KAN4(2)            <---------HSFB2a(1)           =====
-------->MYB46(3)---------->DOF2--------->YAB1          <------ZmHOX2a(1)  ---------->DOF2     <----
>AG     <----------DOF2   --------->YAB1  <---------HSFB2a(2)   <---------KAN4(2) <---------LBD16---
 
caacaacaaaacttttccctgaaagaaaatgagaatgagaattttctcgagaaaatagaggattgagaattttctcgggaaagtttcagggaagagagac  7160400
                                                                         <----------ARF1
                                                                      <---------MYB46(3)
                                                                     --------->ALFIN1
                                                                   <------MYB83
                                             <-----------TBP       <---------ZAT2
                                            <---------MYB52(1)     <------MYB46(1)
-----O2                                    <-------GAMYB          --------->MYB55(2)               <
---->TGA1a                                --------->MYB52(2)      <---------MYB46(3)             <--
--------->DOF2                            ----------->GT1        <---------ANAC58      <-------TEIL<
=====bZIP_DOF                         <---------HSFB2a(1)        <---------ANAC46     --------->GLK1(2)
-----ANAC58                           <------MYB83               <---------ANAC58     --------->ARR14(1)
-----TGA1a                            --------->HSFB2a(1)       <------NtERF2         --------->CCA1(2)
---->O2                               <------MYB46(1)          --------->MYB55(2)    <---------GLK1(2)
-----ANAC46                           --------->HSFC1(2)       <---------MYB46(3)    <---------ARR14(2)
-----ANAC55(2)           <---------AtLEC2<-------TEIL         <---------RAP2.6(2)    --------->ARR14(2)
==========bZIP_DOF  *TSS<-------TEIL  <---------HSFC1(2)    <---------MYB46(3)       --------->ARR11(1)
-----ANAC58       ----------->ARR10<------ZmHOX2a(1)       --------->ALFIN1        ----------->ARR10
-------->HVH21----------->GT1   <------ZmHOX2a(1)          <---------AtMYB61  --------->DAG2  <-----
 
gtgaaagaagagagagatggtgagaaatgcatgaaggaggaaggttcgttatataggggagagtggtggctggtgggagagaaggtgagattcggatgag  7160500
                                                                      --------->ARR11(3)
                                                                      <---------ARR11(3)
                                                                -------->HAHB4
                                                                <--------ATHB1
                                                                <--------HAHB4
                                                                --------->ATHB51
                                                                <---------ICU4
                                                                --------->YAB1
                                                             --------->YAB1
                                                             <---------ICU4
                                                            --------->ICU4                    <-----
                                                            <---------YAB1               <---------AHL20(2)
                                                 <-----------GT1--------->ATHB12         <---------YAB1
                                             --------->AHL20(2)<---------ATHB51         <---------AHL20(2)
                                             <---------AHL20(1)<---------YAB1 ------->GAMYB  -------
         <---------ANAC58                    --------->AHL20(1)--------->ICU4 --------->DEAR3(1)
------MYB83                                  <---------AHL20(2)--------->AHL20(2)     <---------AHL20(2)
------P  <---------ANAC58<---------YAB1 --------->AHL20(2)--------->YAB1     --------->MYB46(3)   --
------MYB46(1)<---------ZAT18        <----------DOF2     <---------AHL20(2) <---------At5g28300  ---
----TOE2(3)   --------->ZAT18       <---------DAG2   --------->AHL20(2)    <-----------GT1   <------
 
gttggattttgggcttgggccctattttgtgattctctacctttttaatattttacttaaataataataattagatattaaccgcctatatttttattaa  7160600
                                                                                                   x
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                                                                                               xxxxx
                                                                                               xxxxx
             --------->AHL20(1)                                                                xxxxx
        --------->AHL20(2)                                                                     <----
     --------->ATHB12                                                                          <xxxx
     <--------ATHB1                                                                           ------
     --------->ATHB51                                                                         <-----
     -------->HAHB4                                                                          xxxxxxx
     <---------ICU4                                                                          -------
    <---------AHL20(2)                                                                      xxxxxxxx
    --------->ICU4            <---------ANAC58                                              xxxxxxxx
    <---------YAB1            <---------ANAC58                       --------->GLK1(2)      xxxxxxxx
    --------->AHL20(2)        <---------ANAC46                       --------->ARR14(2)     <xxxxxxx
    <---------ATHB51     --------->ATHB12                            <---------ARR14(2)    xxxxxxxxx
  --------->YAB1         <---------ICU4                             --------->RVE1(1)      xxxxxxxxx
----AHL20(2) <---------ARR11(3)                         <----------DOF2  --------->LBD16  xxxxxxxxxx
-->AHL20(2)  --------->ARR11(3)             <---------TOE1(3)   --------->AHL20(2)       xxxxxxxxxxx
------->AHL20(2)        --------->ICU4      <---------TOE2(3)  --------->AHL20(2)        xxxxxxxxxxx
------>AHL20(2) <---------AHL20(2)         ---------->DOF2 --------->AHL20(2)       --------->At4g35610
---AHL20(2)  <---------AHL20(1)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <xxxxxxxxxxxxxxxxxxx
 
ataaaaaataattgaatattttttagaatgatttcttgaaacattttaaagtttcaattctttaaaataaaaaatccgagtaaaatcagataactatttt  7160700
                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
           xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
        <xxxxxxxxxxxxxxxxsmallRNA(i)
      ------>NtERF2xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
      xxxxxxxxxxxxxxxxxxx>smallRNA(se3)
     --------->ANAC58
     --------->ANAC58 xxxxxxxxxxxxxxxx>smallRNA(i)
   xxxxxxxxxxxxxxxx>smallRNA(s)
   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
  xxxxxxxxxxxxxxxx>smallRNA(i)
 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)
xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)
xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)
xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)
xxxxxxxxxxxxxxxxxx>smallRNA(s2)
xxxxxxxxxxxxxxxxxx>smallRNA(le3)
xxxxxxxxxxxxxxxxxx>smallRNA(i2)
-----AHL20(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
xxxxxxxxxxxxxxxxxxxsmallRNA(le3)
--->AHL20(2)   <xxxxxxxxxxxxxxxxsmallRNA(i)                    --------->YAB1
----AHL20(2)<xxxxxxxxxxxxxxxxsmallRNA(i)                 ------>ZmHOX2a(1)
xxxxxxxxxxxxxxxx>smallRNA(se3)                           <----------DOF2
-->YAB1----------->RAV1(2)                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
xxxxxxxxxxxxxxx>smallRNA(fl3)                         ---------->ID1
xxxxxxxxxxxxxx>smallRNA(fl3)                       --------->MYB59                            <-----
xxxxxxxxxxxxxx>smallRNA(si3)                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       xxxxxx
xxxxxxxxxxxxxxxxsmallRNA(fl3)                 <--------HAHB4  <---------YAB1                 -------
xxxxxxxxxxxxxx>smallRNA(i2)               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                <------
xxxxxxxxxxx>smallRNA(i2)                --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxx
xxxxxxxxxxxxx>smallRNA(le3)<---------At4g35610<---------ICU4 xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)<-----
xxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
xxxxxxxxxxxx>smallRNA(fl3)------>ZmHOX2a(1)   --------->YAB1--------->YAB1   --------->MYB46(3)
xxxsmallRNA(se3)<---------ATHB12  --------->YAB1 xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxx
 
aattttggacgcctgataaatcaagcttcctgctcattcgtaattagaatcattttggtccttttataatatgggtctgaaccattgtaacagatagata  7160800
                                                                                                   <
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                                                                                            --------
                                                                                            --------
                                                                                            <-------
                                                                                            <-------
                                                                                            <xxxxxxx
                                                                                            <xxxxxxx
                                                                                            <xxxxxxx
                                                                                           <xxxxxxxx
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                                                                                           <xxxxxxxx
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                                                                                           <xxxxxxxx
                                                                                           <xxxxxxxx
                                                                                          xxxxxxxxxx
                                                                                          <xxxxxxxxx
                                                                                          xxxxxxxxxx
                                           <---------bZIP60(2)                            <xxxxxxxxx
                                --------->ARR11(3)                                        <xxxxxxxxx
                                <---------ARR11(3)                                       <xxxxxxxxxx
                           <---------TOE2(3)                                             <xxxxxxxxxx
                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                            <xxxxxxxxxx
                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                            <xxxxxxxxxx
          <---------AHL20(1)   xxxxxxxxxxxxxxxx>smallRNA(i)                              <xxxxxxxxxx
          <---------ARR11(3)   <---------GLK1(1)                                        <xxxxxxxxxxx
         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                          <xxxxxxxxxxx
         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                          <xxxxxxxxxxx
  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <---------ANAC58                           xxxxxxxxxxxxxx
  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       <---------ANAC58                       <-----------GT1---
----RVE1(1)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        xxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxx>smallRNA(i2) --------->GLK1(1)                              <xxxxxxxxxxxxxxxxxxxxx
-->ARR11(3)       <---------ANAC58    --------->YAB1                         --------->ARR11(3)<xxxx
---ARR11(3)       <---------ANAC58 <----------DOF2                           <---------ARR11(3)-----
xxxxxxxxxxxxxxxsmallRNA(si3) <------ZmHOX2a(1)          <-------TEIL        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
----CCA1(1) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <----------DOF2  <----------DOF2 <---------AHL20(2)
xxxxxxxxxxx>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
 
tttgaatattcagtatattttgcttcagtttaggaaatctttgatgacttgtctttagattcaataagccttttaatctagatattaacttgcagtatac  7160900
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AGI:  At2g16500.1   
Description:  ADC1 (ARGININE DECARBOXYLASE 1). Identical to Arginine decarboxylase 1 (SPE1) [Arabidopsis Thaliana] (GB:Q9SI64;GB:Q38938); similar to ADC2 (ARGININE DECARBOXYLASE 2) [Arabidopsis thaliana] (TAIR:AT4G34710.2); similar to ADC2 (ARGININE DECARBOXYLASE 2) [Arabidopsis thaliana] (TAIR:AT4G34710.1); similar to arginine decarboxylase 1 [Pringlea antiscorbutica] (GB:AAR08422.1); similar to arginine decarboxylase 2 [Pringlea antiscorbutica] (GB:AAR08423.1); similar to Arginine decarboxylase (ARGDC) (ADC) (GB:O82475); contains InterPro domain Orn/DAP/Arg decarboxylase 2; (InterPro:IPR000183); contains InterPro domain Arginine decarboxylase; (InterPro
Range:  from: 7157704    to: 7160421    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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