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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-------
GAMYB
<------
NtERF2
<---------
DEAR3(2)
<---------
MYB46(3)
--------->
ALFIN1
<---------
DREB2C(2)
--------->
DAG2
<---------
DEAR3(1)
--------->
CCA1(2)
<---------
ABI4(1)
--------->
ARR14(2)
-
------->
GAMYB
--------->
ARR11(1)
-
--------->
MYB52(1)
<---------
GLK1(2)
-
--------->
MYB46(3)
--------->
ARR11(3)
<-
-------
HVH21
<---------
ARR14(2)
--
-->
MYB46(3)
<---------
ARR11(3)
<<<<<<<<<
TBF1
------
AtMYB77
----------->
ARR10
<<<<<<<<<
TBF1
-->
DEAR3(2)
<---------
DEAR3(1)
---------->
DOF2
--------->
ANAC58
<--
>
ARR14(2)
----------->
HVH21
<---------
HSFB2a(2)
--------->
ANAC58
---
-
ARR14(2)
--------->
ALFIN1
---------->
DOF2
---------->
DOF2
<---------
At4g35610
tcaacaacggcggtggaaacagacgacggtgtaaagatactggaaaaggtatcgatgggagtatcaacaaaagctagagcaggcat
cttcttcttcttca
7160000
--------->
At5g28300
----------->
GT1
----------->
AtMYB77
<---------
MYB52(2)
----------->
MYB.PH3(1)
--------->
MYB46(3)
-------->
MYB52(1)
>>>>>>>>>
GATA-2
<---------
LBD16
--------
SPL7
<---------
ARR14(2)
--------->
GLK1(2)
--------->
ALFIN1
----->
GAMYB
<---------
ATHB12
>>>>>>>>>
GATA-1
------->
TEIL
--------->
CCA1(2)
-------
MYB52(2)
>>>>>>>>>
GATA-4
--------->
AHL20(2)
<---------
MYB46(3)
------>
MYB46(3)
>>>>>>>>>
GATA-3
------->
GAMYB
----------->
GT1
------------>
MYB.PH3(2)
acgaacggttacaaatgaattcaaaatttgtggattcaaattttcaacaaacaaaaaaaatggagaaaatgaatctgtgagtttgttagatttgggggaa
7160100
<---------
DAG2
<---------
ALFIN1
<----------
DOF2
--------->
DEAR3(1)
<------
----------->
ARR10
--------->
MYB46(3)
--------
------>
NtERF2
--------->
YAB1
------>
NtERF2
-------
--------->
DEAR3(1)
--------->
WOX13(1)
--------->
LBD16
<-
<----------
CDC5
------->
TEIL
--------->
ANAC46
--
<------
NtERF2
----------->
GT1
--------->
At5g28300
--------
--------->
LBD16
--------->
At4g35610
--------->
ANAC58
---
------>
NtERF2
------->
GAMYB
<------
ZmHOX2a(1)
--------->
LBD16
--------->
ANAC46
--------->
ANAC46
-------->
P
<-----------
RAV1(2)
--------->
AtMYB61
<-----------
GT1
--------->
MYB46(3)
<---------
LBD16
<-----------
RAV1(2)
--------->
GLK1(2)
--------->
ANAC58
---
tttgaaacccgccgaggcgaagagcctcggggctaaccccctcagaaggaagcaggaggtgaatctatcaccaccgtgaaacccgccttttacgacccga
7160200
--------->
LBD16
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
---------->
DOF2
---
ETT(1)
<---------
At4g35610
->
DEAR3(2)
--------->
At4g35610
----------->
GT1
---->
HVH21
<-------
TEIL
--------->
ANAC58
--------->
ARR14(2)
--------
ETT(1)
<---------
TOE1(3)
--------->
ANAC58
--------->
GLK1(2)
--------->
HVH21
<---------
TOE2(3)
----------->
GT1
<---------
ARR14(2)
->
MYB46(3)
--------->
MYB52(1)
--------->
MYB52(1)
<---------
HSFC1(2)
------>
MYB46(3)
<---------
DOF5.7(2)
<---------
TOE2(3)
--------->
HSFC1(2)
-
------>
DEAR3(2)
<-----------
GT1
<----------
DOF2
----------->
GT1
<----------
ID1
-----------------
cccgacccgaaactctccacgattaacgttcagaagaaagcttttttaaaaattttggttaaaaacggaaaaaaacaaatgaagtttccaaatctgtatt
7160300
<----
-----
<---------
LBD16
-
<-----------
RAV1(2)
=========================
--------->
HSFB2a(2)
--------->
HSFB2a(2)
<----
<---------
HSFB2a(2)
<---------
HSFB2a(2)
<----
--------->
LBD16
--------->
HSFB2a(2)
<---------
LBD16
-----
<---------
LBD16
<---------
HSFB2a(1)
<---------
LBD16
<----
<---------
DAG2
--------->
HSFB2a(1)
--------->
HSFB2a(1)
<----
----------->
RAV1(1)
<---------
KAN4(2)
<---------
HSFB2a(1)
=====
-------->
MYB46(3)
---------->
DOF2
--------->
YAB1
<------
ZmHOX2a(1)
---------->
DOF2
<----
>
AG
<----------
DOF2
--------->
YAB1
<---------
HSFB2a(2)
<---------
KAN4(2)
<---------
LBD16
---
caacaacaaaacttttccctgaaagaaaatgagaatgagaattttctcgagaaaatagaggattgagaattttctcgggaaagtttcagggaagagagac
7160400
<----------
ARF1
<---------
MYB46(3)
--------->
ALFIN1
<------
MYB83
<-----------
TBP
<---------
ZAT2
<---------
MYB52(1)
<------
MYB46(1)
-----
O2
<-------
GAMYB
--------->
MYB55(2)
<
---->
TGA1a
--------->
MYB52(2)
<---------
MYB46(3)
<--
--------->
DOF2
----------->
GT1
<---------
ANAC58
<-------
TEIL
<
=====
bZIP_DOF
<---------
HSFB2a(1)
<---------
ANAC46
--------->
GLK1(2)
-----
ANAC58
<------
MYB83
<---------
ANAC58
--------->
ARR14(1)
-----
TGA1a
--------->
HSFB2a(1)
<------
NtERF2
--------->
CCA1(2)
---->
O2
<------
MYB46(1)
--------->
MYB55(2)
<---------
GLK1(2)
-----
ANAC46
--------->
HSFC1(2)
<---------
MYB46(3)
<---------
ARR14(2)
-----
ANAC55(2)
<---------
AtLEC2
<-------
TEIL
<---------
RAP2.6(2)
--------->
ARR14(2)
==========
bZIP_DOF
*
TSS
<-------
TEIL
<---------
HSFC1(2)
<---------
MYB46(3)
--------->
ARR11(1)
-----
ANAC58
----------->
ARR10
<------
ZmHOX2a(1)
--------->
ALFIN1
----------->
ARR10
-------->
HVH21
----------->
GT1
<------
ZmHOX2a(1)
<---------
AtMYB61
--------->
DAG2
<-----
gtgaaagaagagagagatggt
gagaaatgcatgaaggaggaaggttcgttatataggggagagtggtggctggtgggagagaaggtgagattcggatgag
7160500
--------->
ARR11(3)
<---------
ARR11(3)
-------->
HAHB4
<--------
ATHB1
<--------
HAHB4
--------->
ATHB51
<---------
ICU4
--------->
YAB1
--------->
YAB1
<---------
ICU4
--------->
ICU4
<-----
<---------
YAB1
<---------
AHL20(2)
<-----------
GT1
--------->
ATHB12
<---------
YAB1
--------->
AHL20(2)
<---------
ATHB51
<---------
AHL20(2)
<---------
AHL20(1)
<---------
YAB1
------->
GAMYB
-------
<---------
ANAC58
--------->
AHL20(1)
--------->
ICU4
--------->
DEAR3(1)
------
MYB83
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
------
P
<---------
ANAC58
<---------
YAB1
--------->
AHL20(2)
--------->
YAB1
--------->
MYB46(3)
--
------
MYB46(1)
<---------
ZAT18
<----------
DOF2
<---------
AHL20(2)
<---------
At5g28300
---
----
TOE2(3)
--------->
ZAT18
<---------
DAG2
--------->
AHL20(2)
<-----------
GT1
<------
gttggattttgggcttgggccctattttgtgattctctacctttttaatattttacttaaataataataattagatattaaccgcctatatttttattaa
7160600
x
x
x
xx
xx
xx
xx
xx
xxx
xxx
xxxxx
xxxxx
--------->
AHL20(1)
xxxxx
--------->
AHL20(2)
<----
--------->
ATHB12
<xxxx
<--------
ATHB1
------
--------->
ATHB51
<-----
-------->
HAHB4
xxxxxxx
<---------
ICU4
-------
<---------
AHL20(2)
xxxxxxxx
--------->
ICU4
<---------
ANAC58
xxxxxxxx
<---------
YAB1
<---------
ANAC58
--------->
GLK1(2)
xxxxxxxx
--------->
AHL20(2)
<---------
ANAC46
--------->
ARR14(2)
<xxxxxxx
<---------
ATHB51
--------->
ATHB12
<---------
ARR14(2)
xxxxxxxxx
--------->
YAB1
<---------
ICU4
--------->
RVE1(1)
xxxxxxxxx
----
AHL20(2)
<---------
ARR11(3)
<----------
DOF2
--------->
LBD16
xxxxxxxxxx
-->
AHL20(2)
--------->
ARR11(3)
<---------
TOE1(3)
--------->
AHL20(2)
xxxxxxxxxxx
------->
AHL20(2)
--------->
ICU4
<---------
TOE2(3)
--------->
AHL20(2)
xxxxxxxxxxx
------>
AHL20(2)
<---------
AHL20(2)
---------->
DOF2
--------->
AHL20(2)
--------->
At4g35610
---
AHL20(2)
<---------
AHL20(1)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(i2)
<xxxxxxxxxxxxxxxxxxx
ataaaaaataattgaatattttttagaatgatttcttgaaacattttaaagtttcaattctttaaaataaaaaatccgagtaaaatcagataactatttt
7160700
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<xxxxxxxxxxxxxxxx
smallRNA(i)
------>
NtERF2
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
--------->
ANAC58
--------->
ANAC58
xxxxxxxxxxxxxxxx>
smallRNA(i)
xxxxxxxxxxxxxxxx>
smallRNA(s)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
xxxxxxxxxxxxxxxx>
smallRNA(i)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(s2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(s2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
xxxxxxxxxxxxxxxxxx>
smallRNA(s2)
xxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxx>
smallRNA(i2)
-----
AHL20(2)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
xxxxxxxxxxxxxxxxxxx
smallRNA(le3)
--->
AHL20(2)
<xxxxxxxxxxxxxxxx
smallRNA(i)
--------->
YAB1
----
AHL20(2)
<xxxxxxxxxxxxxxxx
smallRNA(i)
------>
ZmHOX2a(1)
xxxxxxxxxxxxxxxx>
smallRNA(se3)
<----------
DOF2
-->
YAB1
----------->
RAV1(2)
<xxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
xxxxxxxxxxxxxxx>
smallRNA(fl3)
---------->
ID1
xxxxxxxxxxxxxx>
smallRNA(fl3)
--------->
MYB59
<-----
xxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxx
xxxxxxxxxxxxxxxx
smallRNA(fl3)
<--------
HAHB4
<---------
YAB1
-------
xxxxxxxxxxxxxx>
smallRNA(i2)
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(i2)
<------
xxxxxxxxxxx>
smallRNA(i2)
--------->
YAB1
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<xxxxxxxx
xxxxxxxxxxxxx>
smallRNA(le3)
<---------
At4g35610
<---------
ICU4
xxxxxxxxxxxxxxxxxxxx>
smallRNA(s2)
<-----
xxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxx>
smallRNA(fl3)
------>
ZmHOX2a(1)
--------->
YAB1
--------->
YAB1
--------->
MYB46(3)
xxx
smallRNA(se3)
<---------
ATHB12
--------->
YAB1
xxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxx
aattttggacgcctgataaatcaagcttcctgctcattcgtaattagaatcattttggtccttttataatatgggtctgaaccattgtaacagatagata
7160800
<
<
<
<
<
<
<
<-
<x
<xxx
xxxx
<xxx
<xxx
<xxx
xxxx
xxxxxx
xxxxxx
<xxxxxx
<xxxxxx
<xxxxxx
xxxxxxx
<xxxxxx
xxxxxxx
xxxxxxx
<xxxxxx
xxxxxxx
xxxxxxx
--------
--------
<-------
<-------
<xxxxxxx
<xxxxxxx
<xxxxxxx
<xxxxxxxx
xxxxxxxxx
xxxxxxxxx
<xxxxxxxx
<xxxxxxxx
<xxxxxxxx
xxxxxxxxx
xxxxxxxxx
xxxxxxxxx
xxxxxxxxx
<xxxxxxxx
<xxxxxxxx
xxxxxxxxxx
<xxxxxxxxx
xxxxxxxxxx
<---------
bZIP60(2)
<xxxxxxxxx
--------->
ARR11(3)
<xxxxxxxxx
<---------
ARR11(3)
<xxxxxxxxxx
<---------
TOE2(3)
<xxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
<xxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<xxxxxxxxxx
<---------
AHL20(1)
xxxxxxxxxxxxxxxx>
smallRNA(i)
<xxxxxxxxxx
<---------
ARR11(3)
<---------
GLK1(1)
<xxxxxxxxxxx
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<xxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
<xxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
<---------
ANAC58
xxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
<---------
ANAC58
<-----------
GT1
---
----
RVE1(1)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxx>
smallRNA(i2)
--------->
GLK1(1)
<xxxxxxxxxxxxxxxxxxxxx
-->
ARR11(3)
<---------
ANAC58
--------->
YAB1
--------->
ARR11(3)
<xxxx
---
ARR11(3)
<---------
ANAC58
<----------
DOF2
<---------
ARR11(3)
-----
xxxxxxxxxxxxxxx
smallRNA(si3)
<------
ZmHOX2a(1)
<-------
TEIL
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
----
CCA1(1)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<----------
DOF2
<----------
DOF2
<---------
AHL20(2)
xxxxxxxxxxx>
smallRNA(i2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
tttgaatattcagtatattttgcttcagtttaggaaatctttgatgacttgtctttagattcaataagccttttaatctagatattaacttgcagtatac
7160900
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AGI:
At2g16500.1
Description:
ADC1 (ARGININE DECARBOXYLASE 1). Identical to Arginine decarboxylase 1 (SPE1) [Arabidopsis Thaliana] (GB:Q9SI64;GB:Q38938); similar to ADC2 (ARGININE DECARBOXYLASE 2) [Arabidopsis thaliana] (TAIR:AT4G34710.2); similar to ADC2 (ARGININE DECARBOXYLASE 2) [Arabidopsis thaliana] (TAIR:AT4G34710.1); similar to arginine decarboxylase 1 [Pringlea antiscorbutica] (GB:AAR08422.1); similar to arginine decarboxylase 2 [Pringlea antiscorbutica] (GB:AAR08423.1); similar to Arginine decarboxylase (ARGDC) (ADC) (GB:O82475); contains InterPro domain Orn/DAP/Arg decarboxylase 2; (InterPro:IPR000183); contains InterPro domain Arginine decarboxylase; (InterPro
Range:
from: 7157704
to: 7160421
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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