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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
WRKY12
--------->
At4g35610
<---------
At4g35610
--------->
ZAT2
--------->
GLK1(2)
<---------
At4g35610
<-----------
RAV1(2)
<------
NtERF2
--------->
ATERF1(1)
------>
NtERF2
<---------
ATERF1(1)
--------->
RAP2.3(2)
--------->
RAP2.3(3)
--------->
DEAR3(1)
------->
GAMYB
--------->
ERF1
--------->
ATERF1(1)
--------->
MYB46(3)
<---------
ANAC58
<-------
--------->
RAP2.3(1)
<---------
ANAC58
<-------
--------->
ARR11(3)
--------->
ZAT2
----------->
HVH21
--------->
ARR11(3)
---------
<---------
ARR11(3)
--------->
At4g35610
--------->
ANAC58
------>
ZmHOX2a(1)
--->
HSFC1(2)
<---------
At4g35610
--------->
ANAC58
<---------
At4g35610
----
HSFC1(2)
---------->
DOF2
--------->
RAP2.6(2)
--------->
SPL7
--------->
At4g35610
---->
ARR10
<---------
YAB1
<---------
ATERF1(1)
<---------
SPL7
<---------
MYB52(1)
------
>
CCA1(2)
--------->
CCA1(2)
<---------
At4g35610
<---------
MYB52(1)
<----------
DOF2
------>
ZmHOX2a(2)
ttcgcacatagatatactatcaaaggctctagcagccgcctcagaagctgaccggtacgccttagagcttgcaaaccctttagcttcctcgatcgcctta
6691800
<---------
ARR11(3)
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
--------->
ANAC55(2)
--------->
YAB1
--
DAG2
--------->
ANAC55(1)
<--------
ATHB1
<---------
ICU4
---
DOF2
<---------
GLK1(2)
--------->
At4g35610
<---------
ATHB12
------
-------->
AGL1
<---------
LBD16
<---------
At4g35610
--------->
YAB1
<-------
--->
ATHB12
<----------
DOF2
--------->
YAB1
<---------
ICU4
<----------
DOF2
<-------
TEIL
ttggataattcatattctttcacgcaagacctataatacttcttgagcttcgaataattctcggttctatctaagcctttaatcatctctaggttcttat
6691900
<---------
At4g35610
<---------
MYB52(1)
<---------
ANAC58
<---------
ANAC55(1)
<---------
ANAC46
<-----------
HVH21
<------------
AtMYB77
<---------
ANAC58
--------->
MYB46(3)
<---------
ARR11(3)
<---
------>
MYB46(1)
<---------
ARR14(3)
---------->
DOF2
<---
-------->
P
<---------
MYB46(3)
--------->
ARR14(3)
<-------
MYC3
<---
------>
MYB83
<-------
GAMYB
--------->
ARR11(3)
------->
MYC3
---------
--------->
MYB52(1)
--------->
ANAC58
------->
TEIL
<--------
<---------
ALFIN1
<---------
WOX13(1)
<---------
ANAC58
<-------
MYC2
<---------
ZAT14
---->
DOF2
<---------
ANAC58
--------->
ANAC58
<---------
WRKY38(1)
--------->
ANAC58
--
YAB1
<---------
MYB52(1)
<---------
ICU4
<---------
AtLEC2
------->
MYC2
--------->
ANAC58
agcccaaccgttccgtctgttgatagaccatattgacaagaccttgcat
gtcaagggtgaacgtgtttgggaaagaggttagccaagcgagacagaactg
6692000
<-------
GAMYB
<---------
ANAC58
<---------
ANAC58
<------
MYB46(1)
<---------
MYB46(3)
<------
MYB83
--------->
MYB55(2)
-------->
HAHB4
<---------
AtMYB61
<---------
ICU4
<---------
ZAT2
--------->
YAB1
<-------
GAMYB
<--------
P
<---------
YAB1
<---------
At1g77200
--------->
ARR11(3)
--------->
YAB1
<---------
DREB2C(2)
<---------
WRKY18(1)
<---------
ICU4
------
ANAC58
--------->
At4g35610
--------------->
AGL15
<---------
ATHB51
------
ANAC46
<---------
At4g35610
<----------
DOF2
<---------
ATHB12
<-----
------
ANAC58
<---------
MYB46(3)
<---------
ARR11(3)
--------->
ICU4
--------
>
ARR14(2)
<---------
DEAR3(2)
--------->
WRKY38(1)
---------->
DOF2
<-----------
RAV1(2)
-
ARR14(2)
<---------
MYB46(3)
<---------
WOX13(1)
<----------
ID1
--------->
ICU4
<-------
cttggaaattgtcggttgtgagcagagttggttgactaaatcttttctaattttgtcatttggagacaaagacaataatgatgaagacgcaggggtgatt
6692100
--------->
ALFIN1
--------->
TOE1(2)
--------->
TGA1a
--------->
O2
<---------
ANAC58
===============
<---------
O2
<---------
TGA1a
--------->
ANAC58
<---------
ANAC58
--------->
ANAC58
<---------
ICU4
--------->
DAG2
--------->
ATHB12
=============================================
bZIP_DOF
---------->
DOF2
<--------
HAHB4
*
TSS
--------->
ATHB51
--------->
MYB52(1)
--------->
ANAC58
--------->
YAB1
----
WOX13(1)
<-------
TEIL
--------->
ANAC58
--------->
AHL20(2)
<-
->
ATHB12
----------->
GT1
<----------
ID1
<---------
ANAC46
--------->
ICU4
--
--
MYB46(3)
<------
ZmHOX2a(1)
<---------
YAB1
<------------
CBF
--------->
YAB1
------
gatagaataacgagaagaggaagaattgaaaatacatttcttatgagacaa
gaaaaagccattgtcttggacatggaagaataattagacgtgggaagtg
6692200
----------->
GT1
--------->
AHL20(1)
<---------
TOE2(3)
<---------
AHL20(2)
--------------->
AGL15
--------->
AHL20(2)
--------->
TOE1(3)
----------->
GT1
========================================================
<-----------
GT1
<---------
DAG2
<---------
TOE2(3)
<---------
GLK1(2)
--------->
TOE2(3)
<---------
AHL20(2)
<-----------
TBP
<---------
ARR11(3)
<---------------
AGL15
<---------
ICU4
<-------------
======================
bZIP_DOF
<-----------
GT1
--------->
ATHB51
==============
----------
TBP
--------->
ARR11(3)
<---------
GLK1(1)
<--------
HAHB4
<---------
AHL20(2)
------->
AHL20(2)
<---------
RVE1(1)
--------->
GLK1(1)
<---------
YAB1
--------->
AHL20(2)
----->
GT1
---------->
DOF2
<------
ZmHOX2a(1)
--------->
ICU4
<---------
AHL20(1)
tttatatataacttaaaagagatttttctctccaagtaggatttcaaccttattaagaaaaaaatcaccataattaagttaaatattttatatataggga
6692300
<---------
WRKY18(1)
--------->
WRKY12
<---------
At4g35610
<------
ZmHOX2a(1)
xxxxxxxxxxxxxxxx>
smallRNA(i)
----------->
GT1
<---------------------
WRI1
--------->
MYB59
<---------
RVE1(1)
<-------
GAMYB
<---------------
AGL15
<---------
GLK1(2)
--------->
At4g35610
---------
--------------->
AGL15
<---------
ARR11(3)
---------->
DOF2
----------------------
==
MADS_MADS
<-----------------
AG
--------->
ARR11(3)
xxxxxxxxxxxxxxxx>
smallRNA(i)
----------->
GT1
--
AGL15
<-----------
GT1
----------->
ARR10
<-----------
GT1
--------->
WRKY38(1)
--------->
DAG2
===============================
MADS_MADS
<-----------
GT1
<---------
MYB46(3)
---------->
DOF2
atttgaaagtcttataacaaaattaggaaaatagcttagatttttttcaaaattaacaaagcagtctgttgacccaaaaaaaaaaaaaaaaagtaaaagt
6692400
<xxxx
<----
-----
<--------
-------->
HAHB4
<---------
AHL20(2)
<---------
YAB1
---------
<---------
ZAT2
<---------
AHL20(2)
--------->
AHL20(2)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<---------
AHL20(1)
--------->
AHL20(1)
----------->
GT1
--------->
ZAT2
<---------
AHL20(2)
--------->
AHL20(2)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
--------->
AHL20(2)
--------->
LBD16
->
DOF2
<---------
bZIP60(1)
<---------
ZAT18
<-----------
GT1
<---------
YAB1
-->
ANAC81
--------->
bZIP60(1)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
--------->
ANAC46
aagtgaagagtgatatcgctccagcttgtatagtttgttaacaaaacagtctaaaacttgtgcaattttttttttttttatcatccgaaattaattatag
6692500
--------->
CCA1(2)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<-----------
RAV1(1)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<---------
TOE2(3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
------>
ZmHOX2a(1)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<---------
MYB46(3)
<---------
xxxxxxxxxxxxxxxxxx
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
--------->
AHL20(1)
-----
At4g35610
<---------
AHL20(2)
--------->
CCA1(2)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<
---->
At4g35610
--------->
AHL20(2)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
<---------
AHL20(2)
-
ICU4
<XXXXXXXXXXXXXXXXXXXX
MIR867
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(s2)
--------->
AHL20(2)
>
YAB1
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(s2)
xxxxxxxxxxxxxxxxxx>
smallRNA(si3)
ctgaaatgagcaattcctaataaatgttgtttacataagtgatatgatgttgtttacataagtgatatgatgttgttggacacaaattttttgtgtcaag
6692600
--------->
ARR11(3)
--------->
TOE1(3)
--------->
TOE2(3)
<---------
DAG2
<----------
DOF2
<---------
TOE2(3)
--------->
YAB1
<---------
DAG2
xxxxxxxxxxxxxxxx>
smallRNA(i)
<---------
ARR11(3)
----------->
GT1
-----
--
HVH21
<----------
DOF2
--------->
ARR11(3)
--------->
TOE2(3)
-----
----------
DOF2
--------->
TOE2(3)
---------->
DOF2
<---------
ARR11(3)
------>
ZmHOX2a(1)
cgctttaacatttgcactttttcattaatagtttttttttttttttgttgaaagacctttatgccttaaaatctaaatagtaaatactaagtcctaaacc
6692700
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AGI:
At2g15345.1
Description:
enzyme inhibitor/ pectinesterase. similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT3G17230.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501)
Range:
from: 6691493
to: 6692151
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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