Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->TOE2(3)                                                                        ------>ZmHOX2a(1)                                                                       <---------MYB59                                                                      ------>ZmHOX2a(2)                                                                     <------ZmHOX2a(2)              --------->YAB1                                        <---------ARR14(2)             <---------YAB1                                         --------->AGP1         <---------ANAC58     <------MYB83       <---------AHL20(2) --------->ARR11(3)  <-----------GT1             <------MYB46(1)    --------->AHL20(2) <---------ARR11(3) ------>AHL20(2)             --------------->AtSPL8  <-----------GT1--------->ARR14(2) -------AHL20(2)             --------->MYB59    <---------AHL20(2) <---------GLK1(1)                < ---->GT1<---------ANAC58<---------YAB1         --------->AHL20(2) --------->GLK1(1)             <---   taaattacatttcttatcatatatgttatatttggtacctgctcatatttttaaattacatttcttatgagatcctaattttcttaacttagtcattttc  6511000                                  --------->ANAC58                                  --------->ANAC58                             ------>ZmHOX2a(2)                            --------->CCA1(2)                            <------ZmHOX2a(2)                           <---------AGP1                           --------->AGP1                           --------->ARR14(3)                           <-----------ARR10                           <---------ARR14(3)                           --------->GLK1(2)                                       -------->ATHB1                           --------->ARR11(3)                                      --------->ATHB51                           --------->ARR14(2)                              <---------At4g35610                           <---------ARR11(3)                              --------->At4g35610                           <---------ARR14(2)                         <----------DOF2      ----------              <---------ANAC58<---------HSFB2a(2)                 <---------ZAT18  <---------ICU4              <---------ANAC58--------->HSFB2a(2)                <---------ANAC46 --------->ICU4    -     <----------DOF2     ----------->ARR10                       <---------ANAC58 <---------ATHB12 -- ---------MYB46(3)   --------->HSFB2a(2)                         <---------ANAC58 <---------ATHB51 -- --------RAV1(1)     <---------HSFB2a(2)              <---------TOE2(3)   <-----------RAV1(1)   <----   tgtggttctttctagtgcttgtgctggaagatctggacgaaaatgttccaaattttaagaattcttggtgtgctttctgctgcaattattcgtaaaagtt  6511100                                                                                                   --                                                                                                  <--                                                                                          --------->ATHB12                                                                                          <--------HAHB4                                                                                          <---------ICU4                                                                                          --------->YAB1                                                                                         <---------ATHB12                                                                                       --------->WOX13(1)     <---------TOE2(3)                                                               <---------ZAT14    --------->YAB1                                                                   <---------ZAT18 >DOF2           --------->ANAC58                               <-------TEIL         --------->ZAT18 ----->ZmHOX2a(1)--------->ANAC58                              <-----------GT1       --------->ZAT14 ------------->AGL15   --------->AHL20(2)           --------->YAB1            <---------AtMYB61  <--- ------->TOE2(3) --------->ANAC46         <---------GLK1(2) ----------->GT1   <---------YAB1     ---- -------GT1    --------->ZAT6   ------->TEIL       <---------YAB1          <---------ZAT6--------->ICU4   tccttataatgtttttgacactcaataacatatgtatttgtctaggttctcttatgataacatagttacatgctctagtgatggtagtgcaatcatttgg  6511200             <---------GLK1(1)             --------->GLK1(1)         --------->ANAC46         <---------ANAC55(2)         --------->ANAC55(2)                                                            <----------DOF2        <---------LBD16                                                              --------->ARR14(2)       --------->MYB52(1)                                                            --------->ARR11(3)      <------ZmHOX2a(2)                                                              <---------ARR14(2)     <---------ARR11(3)                                                              <---------ARR11(1)     --------->ARR11(3)                                                              <---------ARR11(3) ---->ZmHOX2a(2)                                                                    <---------ARR14(1) ----ZmHOX2a(2)                                             <---------ARR11(3) <-----------GT1 ------ARR14(2)                                <---------ICU4           <------ZmHOX2a(1)           < ----->ARR14(2)   ----------->RAV1(2)          --------->YAB1     <---------YAB1    <---------CCA1(2)   atcccaagatcacggagttcgcctgtaacatccgatttcgataagataaccatgacattcaatatgttttcataggagtagaaaccatatctttatttat  6511300                                   --------->ARR14(1)                                   --------->CCA1(2)                                   <------ZmHOX2a(2)                                  --------->ARR14(2)                                  --------->ARR11(3)                                  --------->ARR11(1)                                  <---------ARR14(2)                                     ------>ZmHOX2a(2)                                  <---------ARR11(3)                               <----------DOF2                    --------->ANAC58                                              <---------ANAC58     ----------->GT1--------->ANAC58------>ZmHOX2a(2)                             <---------ANAC58    <---------TOE2(3)            <---------GLK1(1)                      ----------->GT1<---------ARR11(3)    <---------TOE1(3)            <---------HSFB2a(1)        --------->DAG2        <---------ANAC46   <-----------RAV1(2) --------->TOE2(3)  ----------->GT1  ---------->DOF2    <------------CBF ----------DOF2 ------>NtERF2   ----------->ARR10 ----------->GT1   <---------ARR14(2) --------->ARR11(3)   gtctttcaggtaaaatgctgccaagccttagaagaagatccgagaggttgaaagataaaacaaaagtgagtattttgtaatattgctttgatcttgtggc  6511400                                                  --------------->AGL15                                            <---------ICU4                                          <---------ARR11(3)                                   --------->ANAC58                                <---------At4g35610                            <----------DOF2 --------->YAB1                                         --                        --------->ANAC55(2)<------ZmHOX2a(2)                                       <-                        <---------ANAC58  --------->ARR11(3)           ---------->DOF2             <-                        <---------ANAC58 <------ZmHOX2a(1)     <---------ANAC58                    <-                      <-----------GT1    --------->YAB1        <---------ANAC58  <----------DOF2   --                <---------MYB52(1) --------->ANAC58           <---------------------WRI1           --           ----------------------->TaNAC69(2)    *TSS<----------DOF2<---------ANAC46       <---------   taaatatgctacttatctgtttttttacgtctttagcaggctaggatcatgacttctttgagtaggcgttgcgaaaagagaaactttgatgagcttgagg  6511500                                                                                   --------->At4g35610                                                                                   <---------At4g35610         --------->At5g28300                                                       <-------GAMYB     --------->ANAC46                                                             <---------MYB46(3)     --------->ANAC58                                                       <---------ANAC58     --------->ANAC58                                                       <---------bZIP60(2) ------->At4g35610                                                          <---------AtLEC2 --------GLK1(1)                                                            <---------ANAC58 --------At4g35610                                                <---------ARR14(2) --------ZAT2                                                     --------->ARR14(2)                < ------->ZAT2      ------->MYC3   <---------REM1(1)               <---------ARR11(3)               <- ------->GLK1(1)   <-------MYC3  <---------TOE2(3)   <---------YAB1    --------->ATHB12    <--------- -DOF2  ----------->GT1     <---------ZAT6       <---------ANAC46 --------->ARR11(3) ----------->HVH21   gagctccaagcagtaaaaacacatgtaatggtgttaatgtagcacatagttgtttgtaattgaaaacagatattgatggcatggcagttgacactttctc  6511600                                                   <---------DEAR3(1)                                                   <---------ANAC46                                                 --------->MYB52(1)                                                ----------->TGA1                                                ----------->HVH21                      <------NtERF2                                      --------->HSFB2a(2)                     ------->TEIL                                      <---------HSFB2a(2)                     <-----------GT1       <                                   --------->ARR11(3)                      ----------->GT1      <---- ---------MYB46(3)                 <---------ARR11(3)                 <---------LBD16  <---------ANAC46 --------AtMYB61      ----------->GT1 <---------HSFC1(1)     --------->MYB52(1)        ----------->RAV1(2) -DOF2<---------AHL20(2)  ---------->DOF2<<<<<<<ZML2 --------->At5g28300 <------ZmHOX2a(1)  <--------   ggtggtttttaatgggtttacaaatggtgaaagacaatatctagaactaaatgacggtgagtctaacggttctcaggatgtaactagtcgcctgaatgat  6511700                                                      -------->HAHB4       <---------At4g35610                            --------->YAB1       --------->At4g35610               --------->ICU4 ---------At4g35610                  <------NtERF2<---------AHL20(2)          --------->ATHB12  <<<<< -----REM1(1) ------->MYC3      ------>ZmHOX2a(1)<---------AHL20(2)          <---------YAB1   <------ -WOX13(1)    <-------MYC3    ----------->RAV1(2)--------->AHL20(2)        --------->YAB1    --------   gtagcagatagctccatgtgggtttcaagggctcctggtggcactgatgaattaaatgatggttttgaagacatcaaatatgatttgacattagactgtc  6511800                         <---------ARR11(3)                         --------->ARR11(3)                 --------->At4g35610                 <---------At4g35610   >>>>>>>>>ARR2              <------MYB83             >>>>>>>>>ARR1              <------MYB46(1)         --------->ATHB12          --------->MYB55(2)         <---------YAB1          <---------MYB46(3)       --------->CCA1(2)       <---------ANAC58 <---------GLK1(1)       <---------ANAC46 --------->RVE1(1)       <---------ANAC58 <---------RVE1(1)                    ------>ZmHOX2a(1)       <-----------RAV1(1)        <---------ARR11(3)     --------->ARR14(2)  <------ZmHOX2a(1)    --------->ARR11(3)          --------->GLK1(1)                               -- <<<<WRKY18 <--------P <---------ARR11(3)          <---------GLK1(1)    <---------GLK1(2)    -------- -----HVH21<-------GAMYB--------->GLK1(1)  <-----------RAV1(1)  --------->TGA1a            <---------ANAC46 --->GT1 <---------AtMYB61        --------->ARR11(3)     <---------ARR14(2)          --------->ALFIN1   aaaaggattgtgtggttggagcagagatatctctgagatatgattgtgttgggatatcaaatcctcacatcagtgattctctctcaagtggtagtgtgtt  6511900  Previous    Next  AGI:  At2g15029.1    Description:  unknown protein Range:  from: 6511152    to: 6511253    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g15030.1    Description:  pseudogene, similar to LD40380p, blastp match of 31% identity and 2.1e-06 P-value to GP|20151643|gb|AAM11181.1||AY094828 LD40380p {Drosophila melanogaster} Range:  from: 6511449    to: 6513254    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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