Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->AHL20(2)                                      --------->AHL20(2)                                      <---------AHL20(2)                                     --------->AHL20(2)                               <---------ANAC55(2)                               --------->ANAC58                               --------->ANAC58                               --------->ANAC46                               --------->ANAC55(1)                          <---------YAB1  <---------AHL20(2)                         <---------AHL20(2)                            <---------DAG2                         --------->AHL20(2)      ----------->GT1       <----------DOF2                       <---------YAB1<---------AHL20(1)     --------->ANAC58          <---------AHL20(2) ---------YAB1   <---------TOE2(3)   <---------AHL20(2)     --------->ANAC58 <----------------------- ------YAB1 <----------DOF2    --------->ANAC55(2) ----------->GT1  ------->TEIL <---------YAB1 <----   tcattgttgaagtacttttgatgttatttttatacgtaattaatttaaatgaagtgaaaaacaagaaatgaaacttttttgtttttattcaattgtttct  6220700                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                  --------->AHL20(1)                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                            ------>ZmHOX2a(1)                                                <---------AHL20(2)      --------->ARR11(3)                                             <---------AHL20(1)         <---------ARR11(3)   --------->MYB52(2)           --------->YAB1 <------------------------ANAC81    <---------AHL20(1)< <---------MYB52(1)  --------->ARR11(3)      --------->AHL20(1)        --------->CCA1(1)         <--- -ANAC81<-----------GT1--------->TOE2(3)     --------->ARR11(3)        --------->GLK1(1) <-----------GT1 ------DOF2          <---------ARR11(3)      <---------ARR11(3)        --------->RVE1(1)<-----------GT1   tttgttagtttttctatttctaaaatcttatttttcatactttggaatattttttagtttttttgttcatcaaatatcctataatttatttaaacttttt  6220800                    --------->AHL20(1)                              --------->AHL20(2)          --------->YAB1                                            <---------AHL20(2)          -------->HAHB4                                           --------->AHL20(2)         --------->ICU4                                      <------ZmHOX2a(2)    ----------->GT1 <---------AHL20(2)                     --------->At4g35610                 ------  ------>MYB46(1)   --------->AHL20(2)                     <---------At4g35610                 ------  ------>MYB83      <---------AHL20(1)                <---------GLK1(1)                    <--------- ---------MYB59    --------->AHL20(2)           <-----------GT1    <---------AHL20(2) <---------AHL20(2) --------GT1       <---------AHL20(2)<-------GAMYB    --------->GLK1(1)               --------->AHL20(2)   aacctaatgtaataatacaaaataaattagacggtatgctgttgtaaatgttacagaattcagatcaaatttaatcaactatttttaaaaaattaacaag  6220900                                                                                       <---------ANAC58                                                                                       <---------ANAC46                                                                                     <---------TGA2(2)                                                                                    ----------->HVH21                                                                              <---------O2                                                                              <---------TGA1a                                                                              --------->bZIP60(2)                                                                              --------->TGA1a                                                                              --------->ANAC58                                                                              --------->O2                                                                          ------>NtERF2<---------ANAC58                                                                         --------->TGA2(1)                                                                         --------->ANAC58                                                                         --------->ANAC46                                                                <-----------TBP     ----------->TGA1                                                              ==========================bZIP_DOF                                                              <---------DAG2  --------->ANAC58                                                              <----------DOF2------>NtERF2 <------MYB46(1)                                                          <-------PIF5   --------->bZIP60(1)                                           <-----------GT1------->PIF5----------->HVH21<---------bZIP60(2)    --------->ICU4                     <---------CCA1(2) ----------->RAV1(2)<---------ALFIN1 --->ANAC58                         ------->TEIL         --------->ZAT2  <---------bZIP60(1)        - --->ANAC58               <---------YAB1------->TEIL     <---------ZAT2  <---------TGA2(1) <------MYB83 --GT1              <----------DOF2<---------AtLEC2    <---------ALFIN1  --------->ANAC58 <---------TOE2(2)   taagtcatgaagaacatatagtctttttatgtttaatgcatgtatctactatctctcccacctgctttatatatgacgccacgtctatgacgtaggtcaa  6221000                                                                <---------GLK1(1)                                                         --------->AtMYB61                                                        --------->MYB46(3)                                                        <---------MYB55(2)                                                        <---------ATHB12                                                       ------>MYB83                                                       ------>MYB46(1)                              <                                                       -------->P                            <-------                                                      *TSS      <---------At4g35610      <---------TOE2(2)                             --------->ANAC58        --------->MYB46(3)                  <---------TOE1(2)                --------->ZAT14    --------->YAB1    --------->AtMYB61                --------->TOE1(1)      --------->TOE2(3)      <---------ALFIN1     >>>>>>>>>>WRKY26                    --------->TOE2(1) --------->At5g28300         --------->ANAC58     >>>>>>>>>>WRKY38                   ------>ZmHOX2a(1) ---------->GT1 <---------ZAT14   <-------TEIL    >>>>>>>>>>WRKY43               <-----------GT1    -   aacagtaacattagatactatactatcagacacacattcatatggccagagatgaccaaccactggagatgctctaagaaatttatcctcgtaggctttt  6221100                                                           ---------->DOF2                                       <---------YAB1    --------->ANAC58                                    <---------AHL20(2)   --------->ANAC58     ---------->DOF2            <---------AHL20(2)     --------->ANAC46               ---------->DOF2 ----------DOF2            <---------ARR11(3)        <---------ALFIN1        --------->ANAC58 ---DOF2                  <---------At4g35610        --------->AtMYB61       --------->ANAC58 -------------->AGL15   <-----------RAV1(2)         --------->MYB46(3)     ---------->DOF2          <   ctcttttaaaagtcaacatattggagccagatgtttattttataaatactaagaaccacaccaaagaaaaaacatttcaaagcaaaacaaaagagagaga  6221200               ----------->GT1                                                    <------MYB46(1)    --------------->AGL15                                                         <------MYB83    <---------------AGL15                                                ------>MYB46(1)   <-----------------AGL3                                                ------>MYB83               -   ----------------->AGL1          --------->DEAR3(1)                  <---------MYB46(2)          <-   <-----------------AGL2         --------->ATERF1(1)     <---------------AtSPL3<--------P        <--   ----------------->AGL3        --------->ZAT2      <---------PCF2    --------->AtMYB61      <------ ------->TEIL<---------ANAC46    --------->At4g35610<------MYB83 --------->At4g35610         ------>ZmHOX2a(2) <---------ARR14(2)              <---------ZAT2     <------MYB46(1)    --------->MYB46(3)   <------ZmHOX2a(2) --------->ARR14(2)              <---------At4g35610<---------DEAR3(2)--------->ANAC46     --------->ARR14(2) ---------CCA1(2)      ---------->DOF2      ----------->HVH21    <---------At4g35610       <---------ARR14(2)   gtgtatccatttttggaggggaaaacaaagtatgcagcagccctgtgtgatagtgggttcgaagtactgctcaccaaaccctgtaggtttggcgatcgtc  6221300                                                      --------->ARR11(3)     ========================                                                  <--------P                 ------>ZmHOX2a(1)                         <---------HSFC1(2)      --------->At5g28300         ========================                      --------->At5g28300       ----------->GT1              <----------DOF2                      --------->DOF5.7(2)     --------->SPL7               ==========================                     ----------->GT1         ------>NtERF2                 ------>ZmHOX2a(2)                   --------->SPL7           <---------SPL7                ===========================                  --------->MYB52(1)       <---------ANAC58               <------ZmHOX2a(2)                 <---------SPL7            <---------ANAC58              --------->ARR14(2) --------->DAG2<---------------AtSPL3     --------->ZAT18                <---------ARR14(2) --------- -------->SPL7<---------DOF5.7(2)         <---------ZAT18                --------->ARR11(3) --------- --------MYB52(1)------->GAMYB            <---------ZAT14                <---------ARR11(3) --------- -------SPL7  --------->MYB52(1)          --------->ZAT14          --------->ALFIN1        <---------LBD16 ---SPL7    --------->ARR11(3)           --------->ALFIN1<---------YAB1 <------ZmHOX2a(1)<---------REM1(2)   cgtaaggtgatgaagataacggacggtaacttcgtgataacgagtgcggacggtaagttattgttcaaggtgaaggatcctttgtttagtcttcacggca  6221400              <---------KAN4(1)    ------>ZmHOX2a(2)   <------ZmHOX2a(2)  <-----------ARR10  --------->ARR11(3)  --------->ARR14(3)  <---------ARR14(3)  --------->GLK1(2)  <---------ARR11(3)  <---------AGP1  <---------ARR14(2)         <---------ARR11(3)  --------->ARR14(2)         --------->ARR11(3) <------ZmHOX2a(1)<---------LBD16 ==========HOX2a_HOX2a <---------At4g35610 =========HOX2a_HOX2a  --------->At4g35610 =======HOX2a_HOX2a<---------HSFB2a(2)                 <---------AHL20(2) =======HOX2a_HOX2a--------->HSFB2a(2)           ----------->GT1 --------->ZAT14 >ANAC58      --------->KAN4(1)      <----------DOF2   --------->AHL20(2) >ANAC58<---------ANAC58   <---------TOE2(3)     <------MYB46(1) <---------ZAT18 >ANAC46<---------ANAC58   <---------TOE1(3)     <------MYB83    <---------ZAT14   agaggatcttgctggattgttctggagctaaggtcttaactttgagagggaaggtaattaaaaacagagcacataacttgatatatacaattactaatag  6221500                                 --------->At4g35610                          --------->ATHB12               <------NtERF2                          <---------MYB46(3)           --------->ALFIN1                       <------MYB83                  --------->ZAT2                        <---------ZAT14                    --------->CCA1(2)                <---------At4g35610                   <---------ZAT18                   <---------ARR14(2)                --------->At4g35610               <---------DEAR3(1)                   --------->ARR11(1)                <---------ZAT2                   --------->ALFIN1                   --------->ARR11(3)                <---------TGA1a                 ================                 ----------->ARR10                   --------->O2              <---------ZAT14                 <---------TOE2(3)                 <-----------RAV1(2)         --------->SPL7      --                 <---------YAB1  <---------At4g35610 <---------O2            <---------SPL7--------->ZAT18             --------->YAB1 <---------WOX13(1)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)<------ZmHOX2a(1)           <---------YAB1<---------YAB1         ----------->HVH21          <---------------AtSPL8 <--      ----------->GT1  <------MYB46(1)        <---------AtLEC2          --------->ALFIN1 --------->ZAT18   <---------GLK1(2)--------->ARR14(1)      --------->AtLEC2           <------ZmHOX2a(1) <---------ZAT18   agctagatttgttaatattaagatttggtgattgcagatgatgaccatgcatgacaggtggcaagtgtttagaggagggagtacggaggagggtgctcta  6221600  Previous    Next  AGI:  At2g14560.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G33840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48825.1); contains InterPro domain Protein of unknown function DUF567 (InterPro:IPR007612) Range:  from: 6221054    to: 6222983    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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