AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                                            <-------GAMYB
                                                          <------NtERF2
                                                      <-----------HVH21
                                                   ----------------->AGL1
                                               ------>ZmHOX2a(2)
                                              <------ZmHOX2a(2)                                    -
                                             <---------GLK1(2)                                     -
                                             --------->ARR14(3)                                   --
                                             --------->ARR14(2)                                   --
         --------->TOE2(3)                   <---------ARR11(3)                                  <--
         <----------DOF2                     <---------ARR14(2)     ---------->DOF2      --------->ANAC58
  <---------GLK1(1)                          <---------ARR14(3)   --------->ANAC46       --------->ANAC46
  --------->GLK1(1)                          --------->AGP1 <-----------HVH21            --------->ANAC58
--------ANAC46                               <-----------ARR10    --------->ANAC58     <---------ALFIN1
------->ETT(1)                               --------->ARR11(3)   --------->ANAC58   <---------ALFIN1
-------RAV1(1)   <-----------ARR10    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        --------->AtLEC2-
 
gtcggaaatcaactttagcgaaactagccttgaagaagttcagaaacagatcttcccagtcggggttacacgaaagcgattgctccatccacactccatt  6206100
              <---------ATERF1(1)
              --------->ATERF1(1)
             --------->PCF5
             <---------PCF5
             <---------PCF2
        xxxxxxxxxxxxxxxx>smallRNA(i)
       --------->ICU4
   --------->LBD16
   ------>NtERF2
   <------NtERF2
  --------->RAP2.6(2)
  --------->DEAR3(1)
  --------->RRTF1(3)
  --------->RAP2.3(3)
  --------->ANAC58
  --------->ANAC58                                                       <---------AtMYB61
  --------->ANAC46----------->RAV1(2)                                   <---------MYB52(1)
  --------->RRTF1(2)                                                   <-------GAMYB
  --------->RAP2.3(2)                                                 <---------ANAC58
 --------->RAP2.3(1)                                                  <---------ANAC58
 --------->RRTF1(1)                                                   <---------ANAC46
------>GAMYB --------->PCF2                                <---------LBD16
-------->DEAR3(1)<------NtERF2 <---------ANAC58           <---------ANAC58
------->MYB46(3) ------>NtERF2 <---------ANAC58           <---------ANAC46<------MYB83
------->DEAR3(2)--------->ANAC58                          <---------ANAC58<------MYB46(1)
-------At5g28300--------->ANAC58            --------->MYB52(1)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
-------->ANAC46--------->ATERF1(1) <----------DOF2      xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
 
aaccgccgcaattttgggcccgcctgtttcacttccgtctttgaagacgacggaagcgagttcgtggaagatggcgttggtctcttcggtagaagaagac  6206200
                        <---------TOE2(3)
                    ------>ZmHOX2a(2)              --------->WRKY18(1)
                   <------ZmHOX2a(2)               ----------->HVH21
                  <---------ARR11(3)           <---------At4g35610
                  --------->ARR14(2)           --------->At4g35610
                  --------->ARR11(3)           <------NtERF2
                  <---------ARR14(3)<---------DEAR4(1)                           <------NtERF2
                  <---------AGP1    <---------DREB2C(2)                  <---------MYB46(3)
                  <---------ARR14(2)<---------At1g77200                 <---------WOX13(1)
              ---------->DOF2       <---------DEAR3(1)            <---------DEAR3(1)
          <------ZmHOX2a(1)   <-----------RAV1(1) <-----------HVH21<-------GAMYB--------->LBD16
          =================HOX2a_HOX2a --------->ALFIN1           <---------ANAC46
          ================HOX2a_HOX2axxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <---------ANAC46
  ---------->DOF2 --------->ARR14(3)--------->ETT(1)    --------->At5g28300   <---------LBD16
 
ttaagaaaagagaggatgaaagatcttaatgttttgttgtcggtgttggcagcggtcacggtgagaacggcgttgatggatgccggagagaagacacagt  6206300
                                     --------->MYB52(1)
                                   <---------MYB52(2)
                                  --------->ANAC46
                       <---------ANAC58
                       <---------ANAC58      --------->ARR14(2)                            <--------
                <------NtERF2     --------->ANAC58                                         <--------
           --------->ANAC58       --------->ANAC55(1)                                     <---------ANAC58
           --------->ANAC46       --------->ANAC58                                        <---------ANAC58
           --------->ANAC58   --------->ANAC46                                       <----------DOF2
          --------->SPL7<----------DOF2      <---------ARR14(2)                  --------->WOX13(1)
 
ttgagtttttggctacggcagagattactttccccacaagtaacagagaaacctcgttttggttcttcatcgcttcttgcatatcaatcttttgcttttt  6206400
                         --------->ARR14(2)
                         <---------ARR14(2)
                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                     <---------LBD16
                   ------>ZmHOX2a(2)
                  --------->GLK1(1)
                  <------ZmHOX2a(2)
                  <---------GLK1(1)
                  <---------At4g35610
                 <---------ARR14(2)
                 <---------ARR11(3)
                 --------->ARR14(2)                                                        ---------
    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <----------DOF2                         <--------
   <----------DOF2--------->At4g35610    --------->ARR11(3)                                ---------
-DAG2            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <----------DOF2                    <---------CCA1(2)
--DOF2           --------->ARR11(3)      <---------ARR11(3)                            *TSS<--------
 
attcgtctttgagagagagggatctgcggtttctgatgtgctaagttcttggttctttctttttgaatccatattgtaagttttcttctgtgcatatatt  6206500
                                                                                           <--------
        <---------CCA1(2)                                       <-----------GT1            ---------
 <-------TEIL                                                  ----------->HVH21   <-----------RAV1(1)
>ARR11(3)         --------->YAB1                      --------->YAB1             --------->CCA1(2)
-ARR11(3)        <---------AHL20(2)                   <---------ICU4           --------->YAB1      <
>ARR14(2)       --------->AHL20(2)                   <---------YAB1           <---------YAB1 <------
-ARR14(2)------->TEIL <----------ID1               --------->YAB1     <---------AHL20(2)<---------ANAC46
 
caaatacatgtgaatcttatataataagacaaggtttttttgtaagaagctctattatcatgacatttgacatttttttttatgatatgtggcatataca  6206600
                                                         --------->ARR11(3)
                                                         <---------ARR11(3)                 <-------
     <---------AHL20(2)                                 <---------CCA1(2)                -----------
 --------->AHL20(2)                          <---------AHL20(1)                       ---------->DOF2
-ARR14(2)                     <---------AHL20(2)      --------->YAB1        --------->AHL20(2)
>ARR14(2)<---------AHL20(2) <---------YAB1   --------->ARR11(3)             <---------AHL20(2)
---------ANAC55(2)--------->ANAC46       <---------AHL20(2)              --------->WOX13(1) --------
-TEIL--------->AHL20(2) <----------DOF2 --------->AHL20(2)           <-----------GT1--------->ANAC46
 
ttacttaaatatttattctctacaaaactttattaatatgacatttaatatatacactaatatctcaacatttaaccaattaaatacacaaaagtttaaa  6206700
                          --------->TOE2(3)                                                      <--
      --------->AHL20(2)--------->ARR11(3)                   --------->ZAT6                      ---
     --------->AHL20(1) <---------ARR11(3)            <---------YAB1<---------ARR11(3)           ---
     <---------AHL20(1) --------->AHL20(1)          <-----------GT1 --------->ARR11(3)           <--
  --------->AHL20(2)   --------->CCA1(1)           --------->AHL20(2)                        <------
--AHL20(2)         --------->AHL20(2)              <---------AHL20(2)                       --------
>GT1--------->AHL20(2) --------->RVE1(1)       --------->AHL20(2) ----------->ARR10      --------->TOE2(3)
->AHL20(2)<---------AHL20(2)                   <---------AHL20(2) <---------TOE2(3)   <-----------GT1
 
tacaaaaatatatataatgctataaaatatcttagaatttgttttttcatataatttatcatttacactaagattttagaattagtttttttccataaaa  6206800
              <---------------AGL15     --------->ARR11(3)
            --------->AHL20(2)          <---------ARR11(3)
       <---------AHL20(2)               <---------GLK1(2)
       --------->AHL20(2)   <---------AHL20(2)
  <---------AHL20(2)       --------->AHL20(2)                         <---------YAB1
 --------->AHL20(2)     --------->CCA1(2)                            <---------ARR11(3)
<---------YAB1======================================================================================
-------AHL20(1)        --------->ARR11(3)<---------RVE1(1)           --------->ARR11(3)
------>AHL20(1)        <---------ARR11(3)<---------CCA1(1)         <---------YAB1
------>AHL20(2)    ---------->DOF2    ----------->ARR10          --------->YAB1            ---------
-------AHL20(2)   <---------AHL20(2)--------->CCA1(2)            <---------ICU4           --------->ANAC46
---AHL20(2) <---------AHL20(2)   <---------TOE2(3)              <---------YAB1          <-----------GT1
->AHL20(2) <---------AHL20(2)--------->YAB1<---------AHL20(2) --------->YAB1      <----------DOF2
 
tttattatatataatttatatataaagatatataataagataagatttttttgtaagaagctctattatcatgatatttggcattctttttttacgacat  6206900
                                                                     --------->ARR11(3)
                                                                     <---------ARR11(3)
                                                                    <---------CCA1(2)
           <---------ANAC55(2)--------->ANAC46                    --------->YAB1                  --
   <---------ARR14(2)<---------AHL20(2)                  <---------AHL20(1)             <---------AHL20(2)
<---------ANAC46 --------->AHL20(2)                  <---------AHL20(2)                 --------->AHL20(2)
=======MADS_MADS <---------AHL20(2)     <---------YAB1   --------->ARR11(3)          --------->WOX13(1)
------>AGL15 --------->AHL20(2)     <----------DOF2 --------->AHL20(2)           <-----------GT1----
 
atggcatatacaatacttaaatatttattctctacaaaactttattagtatgacatttaatatatacactaatatctcaacatttaaccaattaaataca  6207000
<- Previous    Next ->

AGI:  At2g14540.1   
Description:  serpin family protein / serine protease inhibitor family protein. similar to serpin family protein / serine protease inhibitor family protein [Arabidopsis thaliana] (TAIR:AT1G62170.1); similar to serpin-like protein [Citrus x paradisi] (GB:AAN76362.1); contains InterPro domain Protease inhibitor I4, serpin; (InterPro:IPR000215); contains InterPro domain Protease inhibitor I4, serpin, plant (InterPro:IPR015554)
Range:  from: 6204745    to: 6206488    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version