Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->GLK1(2)                                                                            --------->ARR11(3)       ========================bZIP_DOF                                     <---------ARR11(3)       <---------ANAC46                                                   ----------->ARR10       <---------ANAC58                                                 <---------MYB52(1)       <---------O2                                                    --------->LBD16       --------->O2 <----------DOF2                                   --------->ANAC55(2)       <---------ANAC58             <---------ANAC58                  <---------ANAC55(1)       --------->TGA1a              <---------ANAC58                  <---------ANAC55(2)       <---------TGA1a             <---------TOE2(3)                  <---------ANAC58     --------->MYB52(1)   <---------TOE1(2)                           <---------ANAC46   <---------MYB52(2)  <---------ANAC58                               <---------ANAC58  --------->At4g35610  <---------ANAC58                          <---------ZAT2                  <---  <---------At4g35610  <---------ANAC46                          <---------At4g35610          ------- --ARR11(3)  --------->ARR11(3)   <-----------GT1                --------->At4g35610          ------- ->ARR11(3)  <---------ARR11(3)<---------ICU4 ----------->GT1    --------->ZAT2      ----------->GT1   tcgcatctaacgtgagttcttcctttcgtagaatttttacgttcgatactgtatattgaatcgattcagcttccgtgagattttgttttgaaaaatgtga  5701800                              <---------ANAC58                              <---------ANAC58                       <---------YAB1       <---------ATHB12       <---------ANAC46                 ------>ZmHOX2a(1)                  --- ------ANAC46              <---------MYB52(1)                ----------->RAV1(2)              ------- ---->TGA1------->TEIL   <---------ANAC58                 <---------At4g35610                 ------- ---->HVH21              <---------ANAC58                 <---------ZAT2                      <------   cgagaaacaatgaatcgatgtttgttttcgtttcgttttcgatttcttctccatcgctcgagctcctgattttgatttttgtccatgtttatcgtctgca  5701900                          --------->SPL7                         <---------SPL1(1)                        <---------SPL1(2)                        <---------SPL7                        --------->LBD16                       <---------ANAC58                       <---------ANAC46                       <---------ANAC55(2)    --------->LBD16                       <---------ANAC58   --------->ARR14(2)                            <---------WOX13(1)                       --------->ANAC55(2)<---------ARR14(2)                           <------------CBF                      <---------------AtSPL3 <---------ANAC46               --------->At4g35610                      --------------->AtSPL8 <---------ANAC58               <---------At4g35610                      --------------->AtSPL3 <---------ANAC55(1)            <---------ZAT2 ------>ICU4        ------------------>SPL14 <---------ANAC58               --------->ZAT2     <----- -->ZAT18      <-----------RAV1(1)        --------->GLK1(2)       <---------ANAC58     >>>>>>>>>ARR2 -->ZAT14   <----------DOF2        <------------CBF               <---------ANAC58    --------->ATHB12 ---ZAT14   ------>ZmHOX2a(1)    <---------YAB1               <------------CBF       <---------YAB1   ctgatttcgaggtccttttgttgttccgtacgatttcgattgagtttccgtgaaatctctgttcgattgcttcgctcgagctccattttgattgttcatg  5702000                    --------->ARR11(3)           <---------ARR14(2)           --------->ARR14(2)           <---------GLK1(2)        <---------ANAC58        --------->ANAC55(2)        <---------ANAC58        <---------ANAC46        <---------ANAC55(2)       <---------LBD16            <-----------RAV1(1)    <-------GAMYB   <---------ARR11(3)               <---------MYB52(1)   <---------MYB46(3)             <---------ZAT6   ----------->GT1   <-----------RAV1(1)<---------ANAC58         --------->WOX13(1)     ---------->DOF2     -----------   --------->MYB52(2) <---------ANAC58       ------------>CBF<---------MYB59            <---------ANAC58 ----YAB1--------->LBD16   <-----------GT1   <---------ATHB12--------->TOE2(3)          <---------ANAC58   tttgtttgttgcggaatcgcaagagcttgtaacctagtgttgttctaatcaatctgttatatacctaaattcaaaagtagcatcttaatcgcttgacaaa  5702100                                                                           <---------YAB1                                                                 <------MYB83              <-------TEIL                                       ----------->GT1   <-----------------AGL2------>ZmHOX2a(1)           <------------CBF  <------------CBF  <---------At4g35610   --------->TOE2(2)      ---------->ID1 <------------CBF  --------->At4g35610   --------->TOE1(2)    <-----------RAV1(1) <------MYB46(1) >HVH21   <-----------RAV1(1)         <---------ANAC46       --------->ATHB12  ------------>CBF   aattagctgtttttggtgcatataatccttcgattttgttttgtgttttgttgtttattgagaagattggtaacattgtgattcaatgttttgtaacagg  5702200                                                                             <---------ZAT14             --------------->AtSPL3                                          --------->ZAT14             <---------------AtSPL3                                         ----------->RAV1(1)             <---------------AtSPL8                                 --------->At4g35610            --------->ZAT14                         --------->RAP2.6(3)------>NtERF2            <---------ZAT14           <-----------RAV1(2)           <---------At4g35610 --------->CCA1(2)                    ---------->CDC5<---------RAP2.6(2) ----------->RAV1(1)   gagagatggcacagagtagtacatctcatgactcaggccctcaggggctcatgagacggccatctcgtagtgctgccacaacagtgtctattgaagtttt  5702300                ------>NtERF2                          --------->ZAT14              <---------RAP2.6(2)                      <---------ZAT14             <---------LBD16                           --------->At4g35610           --------->ARR14(2)                          <---------At4g35610              <---------CCA1(2)           <---------ARR14(2)                       <---------At4g35610               <---------ANAC58         <---------MYB46(3)                         --------->At4g35610               <---------ANAC58        --------->ALFIN1                        <-----------RAV1(1)              <-----------RAV1(1)        <---------AtMYB61                       --------->ALFIN1            --------->RAP2.3(3)      <---------bZIP60(2)                     <---------ANAC46              --------->DEAR3(1)      <---------ANAC46                        <---------ANAC58            --------->ZAT18 --------->YAB1------>NtERF2 <---------YAB1   <---------ANAC58            <---------ZAT18 <---------ICU4--------->LBD16         ------>ZmHOX2a(1)                --------->At4g35610      ----   tgatcatgaggtggttccggcctcccttggtaccattgctcctattctgcgtgttgctgcagagattgaacatgagcgccctcgtgttgcctatctctgt  5702400            <---------ANAC58            <---------ANAC58         --------->ARR14(2)      <---------ANAC58                          <---------ZAT14                                     <      <---------ANAC46                        --------->ANAC46                          <---------ANAC46      <---------ANAC58                      <-----------GT1  <XXXXXXXXXXXXXXXXXXXXMIR841B*          <    <-----------GT1                  --------->At4g35610  --------->ALFIN1     <---------ANAC58     < ------->TEIL   ---------->ID1       <---------At4g35610<---------ANAC46       <---------ANAC58    <- --->TEIL<---------ARR14(2)      ----------------------->TaNAC69(2)         <-----------GT1       <--   atgtatttgcgtttccttgttgttttgtttgcagaattaagctgatatacttcacttgctgtgtgactcacttgaaattttccttgtgttttgtatatag  5702500                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                 --------->ARR14(2)                               <------MYB46(1)                               <------MYB83                             <--------P          ------->TEIL    <---------TOE1(2)    <---------MYB46(3) ------MYB46(1)           <---------TOE2(2)   <---------AtMYB61 ---------DEAR3(2)    --------->ZAT18      <-----------RAV1(1)       --------->ANAC46 ------MYB83        <---------At4g35610--------->ZAT2    --------->ALFIN1 --------DEAR3(1)   --------->At4g35610<---------ZAT2   <-----------HVH21                    -------- -------ORA47(1) ---------->DOF2 <---------ARR14(2)    --------->ALFIN1         <----------DOF2  ----   gtcggttttatgcatttgagaaagctcacaggttggatccaagctctggtggtcgaggtgtgaggcagtttaagacacttctctttcaaagattagaaag  5702600     <---------CCA1(2)   --------->YAB1   <---------ICU4  --------->ICU4                                                                 <---------HSFB2a(2)  <---------ATHB12                        --------->ICU4                         --------->HSFB2a(2) -->DOF2                              --------->At5g28300              <----------DOF2   --------->ZAT14 ------->GT1<---------YAB1           ----------->GT1       <----------DOF2--------->YAB1 <---------ZAT14   ggtaatcatctcttactattctatctgttttcttgaacacagtaaatattgtcatatgggactttatatcaggcttttatcatctagacactacacatag  5702700  Previous    Next  AGI:  At2g13680.1    Description:  CALS5 (CALLOSE SYNTHASE 5); 1,3-beta-glucan synthase. similar to ATGSL03 (GLUCAN SYNTHASE-LIKE 3), 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G31960.1); similar to CALS1 (CALLOSE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G05570.1); similar to ATGSL12 (GLUCAN SYNTHASE-LIKE 12), 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G13000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46417.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80181.1); similar to putative beta Range:  from: 5702206    to: 5713216    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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