Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------ARR11(3)                                                                    <-----------ARR10                                                           <---------HSFB2a(2)                                            <xxxxxxxxxxxxxxxxsmallRNA(i)                                          --------->ZAT6   ------>ZmHOX2a(1)                                      ------>ZmHOX2a(1)    --------->HSFB2a(2)                --------->ARR14(2) ------>MYB46(1)        <---------LBD16        <xxxxxxxxxxxxxxxxsmallRNA(i) --------->TOE2(3)   ----------->RAV1(2)                   ------       <---------LBD16             ------>MYB83       <---------ZAT2--------->ARR11(3)        -------      ----------->RAV1(2)  <---------At4g35610        <---------At4g35610           --------->ZAT2     <---------ARR14(2)    ----------->RAV1(2)        --------->ZAT2--------->ARR14(2)--------->ZAT18 --->GAMYB   --------->ANAC58----------->HVH21        --------->At4g35610           <---------ZAT2 -->MYB52(1) --------->ANAC58------>ZmHOX2a(1)    <-----------HVH21 <---------ARR14(2)<---------ZAT18   cgaggcatacctggaacgaaacctcatgctcctgaccatccttcacactcgttgtcagctcctggatgagggtcttcccttcttcgagctcgctcgccga  5112500                                                        <---------ANAC58                                                        ----------->RAV1(2)                                                        <---------ANAC58                                                 <---------ZAT2                  <---------ANAC46        --------->MYB52(2)  <---------HSFB2a(1)                     <---------ANAC58  --------->HSFB2a(1)                     <---------ANAC58                ----------->HVH21  <---------HSFC1(2)               <---------ZAT2--------->ZAT2         --------->At4g35610  --------->HSFC1(2)               --------->ZAT2<---------At4g35610    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) >NtERF2     <---------O2   --------->At4g35610  --------->At4g35610    --------->ZAT2              < -->DEAR3(1) <---------TGA1a<---------At4g35610  <------NtERF2          <---------At4g35610      <---   gggaaccttgctcagacgttgctcatagtgagcgaccagcttgttcgtggcagctatcgcctgccaaaggttagagctgacataagaatggaattagaag  5112600                                                        --------->ATERF1(1)                                                        <------NtERF2                                                       ------>NtERF2                                                       <---------ATERF1(1)                                                       --------->ABI4(1)                                                      --------->RAP2.3(2)                                                      --------->DREB2C(2)                                                      --------->RRTF1(2)                                                      --------->RRTF1(3)                                                      --------->RAP2.6(2)                                                      --------->ATERF1(2)                                                      <---------ALFIN1                                                      --------->DEAR3(1)                                                      <---------ATERF1(2)                                                      --------->RAP2.3(3)                                                     <------NtERF2                                                     --------->RRTF1(1)                                                     --------->RAP2.6(1)                                                     --------->DEAR4(2)                                                     --------->ERF1                                                     --------->ORA47(2)                                                     --------->RAP2.3(1)                                                     --------->ATERF1(1)                                                    <---------RAP2.3(1)                                                    <------NtERF2                                                    ------>NtERF2                                                    <---------At4g35610                                                    --------->ATERF1(1)                                                    <---------ATERF1(1)                                                    --------->At4g35610                                                    <---------DEAR4(2)                                                    --------->DREB2C(1)                                                    <---------DREB2C(1)                                                   <---------DEAR3(1)                                           xxxxxxxxxxxxxxxx>smallRNA(i)                    --------->ARR14(2)            <---------ICU4  ------>ZmHOX2a(1)      --------->DEAR3(1)          --------->ANAC46          <---------ANAC55(2)              <---------At4g35610                ------>NtERF2<---------ARR14(2)          --------->ANAC55(2)       --------->YAB1 --------->RAP2.6(2)        --------->LBD16      <-   <-------GAMYB        <---------ALFIN1   --------->At4g35610                <---------LBD16  ------ ------NtERF2    ----------->RAV1(2)<---------ICU4 <---------ATERF1(1)    --------->ANAC46<---------At4g35610 ---ZmHOX2a(1) <-----------GT1--------->REM1(1)   <---------RAP2.6(2)  --------->ZAT14   <---------MYB46(3)   gaggcagttatcaagtattacctggccctccttcaccatcatgtcagcataggccgccgcctcagccatgttcttcactccgcgcatttggcagttcctc  5112700                                                                                                    -                                                                                                    <                                                                                                   <-                              --------->ZAT2                                                      ---                              <---------ZAT2                                                    -----                   <-------TEIL   --------->bZIP60(2)                                          ------                 <---------ARR14(2)    ==============HOX2a_HOX2a                              -------         <---------ANAC58  <---------MYB55(2)                                                 <------         <---------ANAC58  --------->MYB46(3)        --------->ARR11(3)                       <------        <-----------------------TaNAC69(2)     ------>ZmHOX2a(2)                         <---------At4g35610      --------->ALFIN1    --------->ANAC46    <------ZmHOX2a(2)                          --------->ZAT2    <---------bZIP60(2) <---------ALFIN1     --------->MYB52(1)                          --------->At4g35610    <---------REM1(1)  --------->DEAR3(1)   ------->GAMYB          <---------ZAT6        <---------ZAT2    <-----------RAV1(1)--------->MYB46(3)  --------->MYB46(3)    <---------ANAC58     <---------ANAC58 ---------DOF2   --------->ARR14(2)    ===============HOX2a_HOX2a<---------ANAC58     <---------ANAC58 >ZmHOX2a(1)    <---------HSFB2a(1)    ------>ZmHOX2a(1)         <---------ANAC46---------->DOF2<----   cctttgatgtggcgaagcaggttcgcccacccagcctcgtcctcaacgatcggatgatcacggtcttgagtgtaagaccagtggaaaggcctgcttcccg  5112800        --------------->AGL15                                           ------>NtERF2       ----------------->AGL2                                          <---------ALFIN1       <-----------------AG                                           <------NtERF2       <-----------------AGL1                                         --------->MYB46(3)      ------>NtERF2                                                  ------>NtERF2      ----------->RAV1(1)                                           --------->PCF2     <---------ALFIN1                                               --------->RAP2.3(3)     --------->ANAC46                                             ------>MYB83                 <-----    --------->MYB46(3)                                            ------>MYB46(1)              ------ -------->ARR14(2)                                             --------->At4g35610           -------- ---------ARR14(2)                                             ----------->RAV1(2)         ---------- --------ATERF1(1)                                            <-----------ARR10            <--------- ------>DEAR3(1)                                              <---------ARR14(2)       ------>NtERF2 ---->LBD16                                                   --------->ARR14(2)    ------>ZmHOX2a(1) --->ANAC46                         ----------->HVH21        <------ZmHOX2a(1)    =================== -->HSFB2a(2)                     --------->LBD16         ===============================HOX2a_HOX2a ---LBD16  <---------GLK1(2)      ------>ZmHOX2a(1)       <------ZmHOX2a(1)     <---------ARR11(3)*TSS ---HSFB2a(2)                   ----------->RAV1(2)  <xxxxxxxxxxxxxxxxsmallRNA(i) ------>ZmHOX2a(2) -----At4g35610            <---------ALFIN1<-----------HVH21 ============================HOX2a_HOX2a   cagacccccaccagaattggaagactgtctcacctcctgagaccgagtcggaccttggaaggaggacctgcccccacctcttgatcctcggcctccgtat  5112900                            --------->ARR14(2)            <------ZmHOX2a(1)     -------->P             <---------ARR14(2)             --------->ARR14(2)     --------->MYB52(1)    ------>NtERF2                   <-----------ARR10   --------->KAN4(2)      --------->LBD16             --------->LBD16  <----------TaMYB80    <---------At4g35610          ------->GAMYB ----ARR14(2)           --------->At4g35610  <--------P <---------TOE1(2) --->ARR14(2)     <----------DOF2         --------->LBD16--------->HSFB2a(1)                     ---- ->LBD16 --------->LBD16<---------LBD16 <---------LBD16<-----------RAV1(2)                      ----- ------->AGL1    <---------ANAC58      ------>ZmHOX2a(1)<---------TOE2(2)             ------>NtERF2 < --------AGL1    <---------ANAC58 <---------ANAC58  --------->MYB46(3)  ------>ZmHOX2a(1)       ----- ==================HOX2a_HOX2a    <---------ANAC58 -------->P <-----------GT1        ----------->HVH21   tgggacatacccgaggactgcttgtctgcggacatggcttcctccgggttagcaaccgcaggttctaccctctcctctcttggaggggcgaccttgtaac  5113000                                     --------->ANAC58                                     --------->ANAC58                                     --------->ANAC46                             ===========================HOX2a_HOX2a                             ------>ZmHOX2a(2)                                                -------                           --------->ARR11(3)                                                 <------      <-----------------AGL1============================HOX2a_HOX2a                          <xxxxxxx     ------->TEIL          <---------ARR11(3)                                               <--------   --------->REM1(2)       --------->ARR14(2)                                              --------->SPL7   <---------ZAT14         --------->ARR14(3)         <---------GLK1(1)                   xxxxxxxxxxx   --------->ZAT14         <---------ARR14(2)    <------ZmHOX2a(1)                       <-----------HVH21 --------->LBD16           <---------AGP1     --------->HSFB2a(2)                 <---------MYB52(2) --->GAMYB                 --------->AGP1 <---------ARR14(2)                      --------->MYB46(3) ---->ANAC58               <---------ARR14(3) <---------HSFB2a(2)     <-------GAMYB  <xxxxxxxxxxxxxxx ------------------SPL14 ----------->ARR10--------->ARR14(2)          <------NtERF2------->GAMYB   -- ---->ANAC58 --------->MYB59<------ZmHOX2a(2) <---------LBD16  ---------->DOF2  <-----------GT1   <--   gcccgtgtaccgagttagggagtaaccaagatcttacacacgcgaattcgaggaagaattcagtttaaaggcggtagacttgtaacgaccgcgtcccgcg  5113100  ---------->DOF2 -->LBD16 ---TOE1(2) <---------MYB52(1) xxxxxxxxxxxxxxxsmallRNA(se3)                     ------->GAMYB                                  ---- -LBD16  xxxxxxxxxxxxxxxx>smallRNA(s)            --------->MYB46(3)                              <--- xxxxxxxxxxxx>smallRNA(s2)                      --------->At4g35610                              ---- xsmallRNA(s)                                  ----------->RAV1(1)                      --------->At4g35610 ------->YAB1<---------MYB52(1)             --------->ANAC58                            <---------At4g35610 -----TEIL <---------DEAR3(2)               --------->ANAC58                   ---------->DOF2   <---   ttcataaagaggccggtttgttttaggggaaaactagaccatggtcgagcaacagactaaaatacttagtcggaagaatgagaaagttcaagctgaacca  5113200                                                                                         <---------STY1(2)      --------->ZAT2                                                             --------->TOE2(3)      <---------ZAT2                                                             <---------MYB59    -      <---------At4g35610                                     --------->ZAT2     --------->TOE1(3) --      --------->At4g35610    --------->STY1(2) --------->At4g35610          <---------STY1(2)      -- <------MYB46(1)    --------->YAB1        <------MYB83        --------->STY1(2)  <---------------AGL15 <------MYB83  --------->STY1(2)  --------->TOE1(3)           <---------STY1(2) ----------------->AGL2 ----->STY1(2) --------->ZAT2<---------STY1(2) <---------At4g35610 --------->YAB1--------------->AGL15 ------ZAT2    <---------STY1(2)  --------->TOE2(3)          --------->ANAC58  -------->P--------->STY1(2) ----->ZAT2   --------->ANAC58  -------->P<------MYB46(1)    --------->ANAC58<---------MYB111(2)   -- ------STY1(2)--------->ANAC58<---------MYB111(2)        <------ZmHOX2a(1)  --------->STY1(2) -------   gctaggtgagctggacaagctagcatgaactagctaccttagctaggtgagctaaaccaggacaagctagcatgaactagctacctaaactagctagcat  5113300                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                  <xx                                                                             --------->MYB52(1)   ---                                                          <---------DAG2   <---------MYB52(2)     ---             <---------MYB52(2)                        <-----------GT1    --------->ANAC58    -------            --------->ANAC46                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <------            --------->ANAC58                  --------->MYB52(1)          --------->ANAC58   <-------            --------->ANAC58                <---------MYB52(2)          xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -------->MYB46(3)                         --------->ANAC58   --------->HSFB2a(2)            <------- ------->ANAC58                            --------->ANAC46   <---------HSFB2a(2)    ----------->HVH21 ------->ANAC46                <---------HSFB2a(2)   xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------YAB1 ------->ANAC58--------->MYB52(1)    <------ZmHOX2a(1)----------->HVH21xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -->YAB1 <-------TEIL  ----------->HVH21   --------->ANAC58<----------DOF2--------->ANAC46  <--------   cacccaatagatgcaaggaacggatgtgacattttggaaggatgcaaggaacggatgtgacctttcggaagggtgcaaggaacggatgtgatgcttcggg  5113400  Previous    Next  AGI:  At2g12520.1    Description:  transposable element gene. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G04070.1); similar to hypothetical protein 26.t00052 [Brassica oleracea] (GB:ABD65035.1); contains InterPro domain Protein of unknown function DUF1633; (InterPro:IPR012436) Range:  from: 5111500    to: 5112898    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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