Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <------MYB83                                         ----------->GT1                                      <-------MYC3                                     <---------O2                                     --------->TGA1a                                     <---------TGA1a                                <---------REM1(2)                                --------->ZAT14                               <-----------HVH21                         <---------ARR14(2)                                                   -------                         --------->ARR14(2)                                                   -------                         <---------GLK1(2)                                                  ---------                       ------->GAMYB --------->O2                                          <---------GLK1(2)                       ========================MYC_MYB         --------->YAB1      ------->GAMYB                    --------->MYB52(1)------->MYC3<-----------GT1                --------->At4g35610-                    ----------->RAV1(1)  <------MYB46(1)  <---------MYB59        <---------At4g35610<   aaaataagagaaattcagaaaacaacagaacctcttcacacgttggtataatatacaatgcctaatattaagaccaaaaactcaactgcattagaatctt  1895600              --------->ANAC58              --------->ANAC58       --------->ARR14(2)       <---------ARR14(2)      --------->At4g35610 --------->WOX13(1)                                            --------->YAB1 -->TOE2(3) ---------->DOF2                              -------->P                    --------->YAB1 -->YAB1--------->CCA1(2)    <---------ICU4          --------->ANAC58          <-------TEIL >GLK1(2)<-------TEIL   <---------YAB1               --------->ANAC46         --------->CCA1(2) -------->AHL20(2) --------->REM1(1)                --------->WOX13(1)       <---------ARR14(2) ---------AHL20(2)<-------TEIL           ------->TEIL--------->ANAC58        --------->ARR14(2)   aattaatcagatacaaaagctacattatcaattttgacacatgaacatcaaaatcaagcaacctataacaattcacacagatacaacaagaatagcaaac  1895700                         --------->ZAT18                         <---------ZAT14                     <-------MYC3                     ------->MYC3              --------->AtLEC2 <---------YAB1              <---------ANAC55(2)<-----------GT1                                           <---------ICU4       ---------->DOF2   <---------ZAT18              --------->ATHB12   --------->At4g35610   tatcaagtcaaaagtcatgtaaacgtgttcactattatccactagtcttctcaaattgatttcatcttagttagtagatgaaacccaaattcaacattac  1895800                                                                               <---------ARR11(3)                                                                               --------->ARR11(3)                               <---------AHL20(2)                          ---------->DOF2                               --------->AHL20(2)                        <---------MYB59                       <---------ZAT18                         --------->GLK1(2)                   <-   <---------ICU4      --------->ZAT18  <-----------RAV1(1)    <---------ARR11(3)                 <--   --------->YAB1     --------->ALFIN1 <---------TOE2(3)       --------->ARR11(3)        --------->YAB1   agtaatcaacacaaacaagtgagagtgggcaatataaatctaatgttgtcaaacccattactcaaaatctacagacctaaagaacttacaatcgaaatct  1895900                                --------->LBD16           <------ZmHOX2a(2)  <---------LBD16 ----------RAV1(1)           --------->MYB52(1)                                                    <- -------TOE2(3)     <---------YAB1----------->HVH21                            <------NtERF2       <-   aatgttgtctgagatcagatttatgaatactcaccggagacagagatggagacggagacggagacggagacgaagagaggcagagagcgatttcgatttg  1896000                                                    --------------->AGL15                                                    --------->TOE1(3)                                                    --------->TOE2(3)                                      ----------->GT1                                      <------MYB46(1)                                      <---------MYB46(3)                                      <------MYB83 <-----------------AGL3                                     <---------DEAR3(1)                                     --------->MYB111(2)                                     <---------MYB46(3)                                     --------->MYB55(2)              <------NtERF2          <---------AtMYB61            <---------ANAC46         --------->MYB46(2)                                      ------>ZmHOX2a(2)            <---------DEAR3(1)       --------->MYB111(1)                                    <------ZmHOX2a(2)           <---------LBD16          <--------P--------->TOE1(3)                            --------->ARR14(2)   <---------ANAC58                 <---------MYB55(1)                                     <---------ARR14(2)   <---------ANAC58                <-------GAMYB <-----------GT1                <---------TOE2(3) --------At4g35610               *TSS--------->ALFIN1 <-----------TBP           --------->MYB59 --------GLK1(1)         ----------->GT1      --------->TOE2(3)                 <---------TOE1(3)   <   gagatgcgagagaggcggagagaagtagagaaaatagggttggtgaaacattaaccttatatagggcttctaatactcggtttaggttaacccgatcgga  1896100                                                      --------->SPL7                          <------                                                     --------->MYB52(1)                       -------            ----------->HVH21                   <-----------GT1                          --------->ARR14(1)           --------->DEAR3(2)             --------->AHL20(1)                           <--------ATHB1         ------>MYB46(1)                  --------->AHL20(2)                           --------->ATHB12         ------>MYB83                     <---------AHL20(1)                          <---------ATHB12         --------->MYB52(1)    <---------MYB52(1)   <---------SPL7                    <---------YAB1       ------->GAMYB     --------->ARR14(2)   <---------ICU4                          --------->ICU4       <---------MYB59   <---------ARR14(2)<---------AHL20(2)                    --------->ANAC58 --------->YAB1    --------->ARR14(2)     <---------AHL20(2)                     --------->ANAC58  <- ---------YAB1     <---------ARR14(2)    --------->AHL20(2)          <---------At4g35610--------->ARR11(1)   ctctgataaccgaactgacccgaaccgaataccgatagcccaaattaatttttccgaacggtttacttctctgctacttcaattcgcaatgattcggttc  1896200        <----------DOF2                                                                           <--       <---------ANAC58                                                                          <---       <---------ANAC58      <---------ARR14(2)                                                  ----   <---------MYB52(1)       <---------GLK1(1)                                                <-------  <---------MYB52(1)       --------->ARR14(2)          --------->ARR14(2)                    -------- --------->LBD16         --------->LBD16               <---------ARR14(2)<---------YAB1      <------- ---ARR14(2)           <---------LBD16    <---------YAB1          <---------DAG2             -------- -->ARR14(2) <---------LBD16--------->GLK1(1)      <---------TOE2(3)  <---------YAB1     <---------AHL20(2) --------LBD16       <-----------GT1   <---------ARR14(2)  ----------->GT1              --------->AHL20(2)   ttccggtttgctttactcgggtttaaccggaaatccaggcctatatgatttttagggtatatggttcaatttttgattatttgttttcgatttattttat  1896300         --------->AHL20(2)        --------->AHL20(2)        <---------AHL20(2)    <---------YAB1  ----------->GT1  --------->YAB1 -------AHL20(2) ------AHL20(2)                                                                             --------- ----->AHL20(2)                                <---------AHL20(2)                 <---------ATHB12 --AHL20(1)                           --------->CCA1(2)                       <---------YAB1--------- ->AHL20(2)              <---------TOE2(3) ----------->GT1          <-----------GT1         <-------- --AHL20(2) <---------AHL20(2)     <---------TOE2(3)          <---------TOE2(3) --------->WOX13(1) ->AHL20(1) --------->AHL20(2)     <---------TOE1(3)      --------->TOE2(3)<---------AHL20(2)       -   taaatgataaataaataaatatgttttaagaaagtttaaggtatagggtttaattttgaaacttaatgttttactattttatcaatgaacaaaataaaat  1896400                                                       --------->AHL20(2)                                                       <---------AHL20(2)                                                   <---------AHL20(2)                                                  <---------YAB1         <---------YAB1                        --------->AHL20(2)                    <-----------GT1    ----------->GT1            <---------WOX13(1) --------->ICU4                 <---------ICU4 >AHL20(1)              <---------YAB1         <---------AHL20(2)                <--------HAHB4 >AHL20(2)            --------->YAB1       <---------ANAC55(2)                  --------->ICU4    <-- -AHL20(2)--------->AHL20(2)<---------AHL20(2) <---------YAB1------->TEIL       <---------YAB1    <-- --------->DOF2 --------->TOE2(3)    <---------YAB1--------->AHL20(2)         --------->YAB1  <------   gcaaaagagttattaaaaacttaatcatatttgattaatctgattacatataattaataaatgaatgtcaaaacgtttgagcataattaacaaaacgttt  1896500  Previous    Next  AGI:  At2g05220.1    Description:  40S ribosomal protein S17 (RPS17B). Identical to 40S ribosomal protein S17-2 (RPS17B) [Arabidopsis Thaliana] (GB:Q9SJ36;GB:Q94K44); similar to 40S ribosomal protein S17 (RPS17D) [Arabidopsis thaliana] (TAIR:AT5G04800.3); similar to 40S ribosomal protein S17 (RPS17D) [Arabidopsis thaliana] (TAIR:AT5G04800.2); similar to 40S ribosomal protein S17 (RPS17D) [Arabidopsis thaliana] (TAIR:AT5G04800.4); similar to unknown [Populus trichocarpa] (GB:ABK94799.1); contains InterPro domain Ribosomal protein S17e; (InterPro:IPR001210) Range:  from: 1894571    to: 1896033    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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