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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                     --------->AHL20(2)
                                                <---------YAB1                       --------->AHL20(1)
                          <---------YAB1 --------->AHL20(2)                          <---------AHL20(1)
                    <---------AHL20(2)   <---------AHL20(1)                         --------->ICU4
            --------->ANAC55(2)<---------AHL20(2)                        --------->ARR11(3)<--------
     <---------AHL20(2) <---------ICU4   <---------AHL20(2)            <---------TOE2(3)<---------AHL20(2)
------>AHL20(2)     --------->AHL20(2)------->TEIL                     <---------YAB1<---------AHL20(2)
-------AHL20(2)------->TEIL    --------->AHL20(2)                      <---------TOE1(3)--------->AHL20(2)
-->GT1   <---------AHL20(2)<---------AHL20(2) --------->YAB1  ----------->GT1<---------ANAC46  -----
 
tttataagttaatttatgtatttttaatttttatttatatgtattttatttataaatgtattgttttgttaattaagattatgtgtaatattttaatgta  1890500
                                        <---------YAB1
                                      -------->HAHB4
                                      <---------ICU4
                                      --------->YAB1
                                     --------->ICU4
                                   <---------ICU4                                                 --
                                   --------->YAB1                                                 <-
               <---------TOE1(3)  --------->AHL20(2)                                              <-
               <---------TOE2(3)  <---------ATHB51                                                --
              ---------->DOF2     <---------AHL20(2)                                          <-----
            <---------YAB1        --------->ICU4                                             -------
    <---------ZAT6               <---------AHL20(1)                                         <-------
-TOE2(3) --------->ICU4         --------->YAB1                                          ============
-->TEIL  <---------YAB1       --------->AHL20(2)  ---------->DOF2                       <-----------
 
tgttttagtgttattattaaagttatatagttttaaaataattatgaacaatataaagactataatgcaaaacacatattttagaaacttcatatttaaa  1890600
                                                                        --------->CCA1(2)
                                                                        --------->GLK1(1)
                                                                        <---------GLK1(1)
       --------->HSFB2a(2)                                             --------->ARR14(2)
       <---------HSFB2a(2)                                       <----------DOF2
------->ARR14(2)                                              <---------AHL20(1)
--------ARR14(2)                                              --------->ARR11(3)               <----
--------ZAT14                                                 --------->AHL20(1)     --------->AHL20(1)
------->ZAT14                                                 <---------ARR11(3)     <---------AHL20(1)
----TOE2(3)                                                  --------->CCA1(1)       <---------AHL20(2)
--->DOF2                      <---------YAB1                 --------->RVE1(1)      --------->AHL20(2)
--AHL20(2)                <----------DOF2                --------->AHL20(2)         --------->YAB1<-
================================================================MADS_MADS           <---------AHL20(2)
----AGL15            --------->YAB1             --------------->AGL15  <---------ARR14(2)      -----
 
gtatactcttggagaagaaactactcatactttatatttgaagtttacatactctatatataaaatatcttttggatatgctctaaattatattggatta  1890700
                                                                                      --------->TOE2(3)
                                                                                     --------->ANAC55(2)
                                                                                     <---------ANAC55(2)
                                                                                     <---------ANAC46
                                                      <-------PIF5        --------->TOE2(3)
         <---------MYB59                       <---------GLK1(1)          --------->TOE1(3)
         --------->TOE2(3)                     <---------At4g35610       ----------------->AGL1
         --------->TOE1(3)           --------->ARR14(2)                 ------->TEIL ----------->GT1
       --------->GLK1(2)             <---------ARR11(3)             --------------->AtSPL8
-----ARR11(3)                        <---------ARR14(2)    <---------MYB46(3)  --------->ZAT6
---------DOF2       <---------YAB1   --------->ARR11(3)   <--------P<---------------AtSPL8
---->ARR11(3)   <----------DOF2      --------->GLK1(2)------->PIF5  <---------------AtSPL3         <
 
tcttttagagaacctaaaactttatatttgagggatagagtatctcttggagatgctcgtggtagttcaatattgtaccttaactgtaacgtaaatgttg  1890800
                                                                              <------------CBF
                                                                             <---------ICU4
                                                                             --------->ATHB51
                                                                             --------->ATHB12
                                                                             -------->ATHB1
                                                                            <---------YAB1
                                              ------>ZmHOX2a(1)             --------->ICU4
                      <---------ANAC55(2) <---------ARR14(2)              --------------->AGL15
           --------->O2                   --------->ARR14(2)              <---------------AGL15
           <---------O2    --------->ICU4 ------->TEIL                   <-----------------AGL3 <---
 <----------DOF2      ----------->GT1    <---------CCA1(2)            <-------TEIL             <----
---------YAB1  <----------DOF2--------->GLK1(2)                   <---------TOE1(2)     --------->ZAT18
 
ttatctttacttagacgtctttgatatgtaaaaattctatctctgtatcctgtttgtactggcctctccaaggttcaccattattggatgatgcactggg  1890900
                                                                                  <---------GLK1(1)
                                                                                  --------->GLK1(1)
                                                                              <------NtERF2
                                                                            <---------DEAR3(1)
                                     --------->ANAC58                       --------->ETT(1)
               <----------DOF2       ----------->GT1                     <------MYB46(1)
  ----------->TBP                    *TSS                                <------MYB83
-----P <-----------GT1      ---------->DOF2                             <---------AtMYB61
---GAMYB       <---------DAG2        --------->ANAC58   <----------DOF2 --------->MYB59           --
 
ttgatatatataacataactttttggcaaaaaaaagaaacaagaaaaaaaaaacagtctctttggcgatagcgatttggtcggagatttctccgattaca  1891000
                                                                                               <----
                                                                                              <-----
                                                                                              ------
                                                                                             <------
                                                                                             -------
                                                                                            --------
                                                                                           <--------
                                                                                         <---------HSFC1(2)
                          --------->ANAC58                                               <---------HSFB2a(1)
               <---------ARR14(2)    --------->LBD16                                     --------->HSFC1(2)
               <-----------ARR10    --------->ANAC46                                --------->HSFB2a(2)
               --------->ARR14(2)  <---------LBD16                                  <---------HSFB2a(2)
        <---------ZAT14   --------->ANAC46                                         ------>ZmHOX2a(2)
       <----------DOF2    --------->ANAC58    <---------ANAC46                   --------->ARR14(2)
<---------WOX13(1)    --------->ANAC46   --------->MYB52(1)                      <---------ARR14(2)
------->ATHB12 ------->TEIL       --------->MYB52(1)  --------->GLK1(2)         <------ZmHOX2a(1)<--
 
ttgattgggactttagtgaatcttcacagaagcaacttcacggagaacggcgagaagaatgtggaattgagagcgtcgttagaggatcgagaagcgtcgg  1891100
                                                                    --------->ATHB12
              ------>ZmHOX2a(2)                            ------->GAMYB
             --------->CCA1(2)                            --------->ANAC58
             <------ZmHOX2a(2)                            --------->ANAC58
            >>>>>>>>>GATA-4                              >>>>>>>>>MYB98
      <---------ZAT14    --------->MYB52(2)             --------->MYB52(1)
      --------->ZAT14    <---------MYB46(3)             ------>MYB83<---------ICU4
<-----------HVH21 <---------ZAT6                        ------>MYB46(1)
--NtERF2    >>>>>>>>>GATA-2                            --------->MYB55(1)
----DEAR3(2)--------->ARR11(3)                        <---------MYB46(2)                    <------NtERF2
>NtERF2     <---------ARR11(3)                        <---------MYB52(2)                   ------>NtERF2
---DEAR3(1) >>>>>>>>>GATA-1                           <---------MYB111(1)                <---------MYB52(1)
-->DEAR3(1) --------->AGP1<-------GAMYB               <---------MYB59         --------->ARR11(3) ---
->ATERF1(1) >>>>>>>>>GATA-3                          --------->ANAC55(2)      <---------ARR11(3)<---
---HVH21   --------->GLK1(1)   <---------REM1(1)     <---------ANAC55(2)--------->YAB1  --------->LBD16
-------MYB46(3)   <-----------RAV1(1)         <-----------GT1      <---------YAB1     <---------LBD16
 
ccgtttcactggagagatctagtgttgttcgttgatgaaggggttctaatttcgatacctaacggaattgatcattgataaggtctcattccggtggcaa  1891200
        <------NtERF2
       --------->LBD16
      --------->LBD16
     <---------LBD16
     <------NtERF2
    ------>NtERF2              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
    <---------ATERF1(1)   <-------TEIL<--------P
   <---------DEAR3(1)    --------->CCA1(2)
   --------->DEAR3(1)    --------->ARR14(1)
  --------->ATERF1(1)   --------->ARR11(1)
  <------NtERF2         <---------ARR14(2)        <----------DOF2
 <-----------HVH21      --------->ARR14(2)   --------->KAN4(2)            <---------ARR11(3)
 <---------ATERF1(1)  ----------->ARR10 --------->MYB52(2)     --------->YAB1           --------->ATHB12
<---------DEAR3(1)<---------ZAT14     <---------MYB52(1)<---------ARR11(3)--------->AHL20(1)
------>YAB1       --------->ZAT18  <---------TOE2(3)    <-----------ARR10 <---------AHL20(1)
------ATHB12      --------->ZAT14  <---------TOE1(3)    --------->ARR11(3)--------->ARR11(3)      <-
 
tcgtcgtcgccggaaacaatgtgcacagatacgaccttgaggttagtttattcctttaaaatctaatcacaacaaaatatatcatttgtattcatgggat  1891300
                                 ---------->DOF2
                           <--------P
                         <------MYB46(1)                         <---------ANAC58
                         <------MYB83                            <---------ANAC58                ---
                        --------->MYB59             >>>>>>>>>GATA-2            <--------P       <---
                        --------->MYB111(1)         >>>>>>>>>GATA-3           <-------GAMYB    <----
                     --------->ARR14(2)             >>>>>>>>>GATA-1          <---------MYB46(3)-----
 <---------YAB1      <---------ARR14(2)             >>>>>>>>>GATA-4         <---------AtMYB61 <-----
 <-------TEIL       <------ZmHOX2a(1)      --------->ICU4    <---------HSFB2a(1)   <---------REM1(1)
--------YAB1      <---------TOE2(3)   ----------->GT1        --------->HSFB2a(1)  <---------TOE2(3)
 
tatgttcattgtaatggatttgaggatttggtagataaaagtagtaaaaattgtggattgaagaattttcttgtgagagatggttgatgtaagggaagga  1891400
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AGI:  At2g05210.1   
Description:  ATPOT1A (PROTECTION OF TELOMERES 1A); telomeric DNA binding. similar to ATPOT1B (PROTECTION OF TELOMERES 1B), DNA binding [Arabidopsis thaliana] (TAIR:AT5G06310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68206.1); contains InterPro domain Telomere end binding protein; (InterPro:IPR011564); contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR016027)
Range:  from: 1890938    to: 1894364    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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