Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------MYB46(2)                                                                                  --------->ANAC58                                                                                  --------->ANAC58       <----------ID1        --------->YAB1    --------->ANAC58                   --------->ANAC46 ---------->RAV1(1)         <---------ATHB12   --------->ANAC58            --------->ANAC58    <----- -->MYB46(3)     <------ZmHOX2a(2)            --------->WOX13(1)           --------->ANAC46 ------>MYB83 ---MYB52(2)--------->MYB52(1)           <---------YAB1               <----------DOF2     <---------MYB59 -ID1---------->DOF2  <-----------HVH21--------->CCA1(2)  ---------->DOF2  --------->ANAC58 ------>MYB46(1)   acccacataaagacaaacgatccatgtcaaatcaaaacaagttatgagcaatccacatttcaaagttgacaactttcacgactcaagcaataccaaactt  1624200                                                                                 ------>MYB83                                                                                 ------>MYB46(1)                                                                                --------->ANAC58                                                                            >>>>>>>>>>WRKY6                                                                            >>>>>>>>>>WRKY11                                                                            <---------WRKY18(1)                                                                           --------->WRKY38(1)                                                                       <---------TOE2(2)                      ----------->GT1                                  <---------TOE1(2)                --------->ANAC58                                    --------->YAB1            --------->ANAC58                   --------->ANAC46     --------->ATHB12---------->DOF2            --------->ANAC58                   --------->ANAC58   ------->TEIL  --------->ANAC58       <------ZmHOX2a(2)                       --------->ANAC58<---------YAB1  --------->MYB46(3) <---------LBD16--------->ANAC58      --------->TOE2(3)--------->CCA1(2)   --------->WRKY12 -----DOF2---------->DOF2  ---------->DOF2 <-----------GT1<------ZmHOX2a(1)--------->WRKY45 ---------   ttctcagggatcaaaagcaagaaatagtaaaaagaagaaacctttttacaagcagagataggatgatgaatcataggttgaccagccaaaggaatcaatg  1624300                                            --------->ARR14(2)                                            ------>MYB83                 --------->MYB52(1)         ------>MYB46(1)                 <---------DOF5.7(2)       --------->WOX13(1)  <---------ANAC46  ------->GAMYB         --------->AtMYB61 >ATHB12       --------->DOF5.7(2)   ------>ZmHOX2a(1)                            <-------TEIL     <-   gtttcggtgtattgaacgataacgggcgaaatcgagttcctaaaccaatccacattagcaaaaacccaaaaccaaaatcaaaaattcatgttttgaaaat  1624400                                                  --------->YAB1                                                 <---------YAB1                                               --------->YAB1                                               --------------------->WRI1                                              <---------ATHB12                                              --------->MYB46(3)                                             ------>MYB46(1)                                             ------>MYB83                                             -------->P                                            --------->MYB55(1)                                           <---------MYB111(1)                                           --------->AtMYB61                                           <---------MYB55(2)                                           <---------MYB111(2)                                           <---------MYB46(2)                                           --------->MYB46(3)                                           --------->DEAR3(1)                                          --------->MYB46(3)                                       --------->MYB46(3)            ---------->DOF2           --------->SPL7                      ----------->HVH21        <------ZmHOX2a(2)            <---------PCF5                       --------->ANAC46        --------->CCA1(2)           <---------SPL7<---------ICU4          <---------ETT(1)       <---------ARR11(3)      <---------AtMYB61 --------->ICU4         ------>ZmHOX2a(1)       --------->ARR11(3)    --------------------->WRI1          <----------DOF2             --------       --------->AGP1    <-----------GT1--------->AtMYB61     ------>NtERF2------>NtERF2<-------TEIL- --------GLK1(2)    ----------->GT1--------->ETT(1)       --------->DEAR3(1)           --------->GLK1(2)   agaatttgagatccaaaagagaatgttatacctttggtcggaccaccaaccatgatcacagcgacgactttctcctccgacatgtcgagattcaataaaa  1624500                                                                      <---------GLK1(1)          <---------TOE1(3)                                           <---------KAN4(1)          <---------TOE2(3)                                           --------->KAN4(1)         <---------DOF5.7(2)                                          <----------TaMYB80         ---------->DOF2                                              --------->GLK1(1)       --------->DOF5.7(2)                                <----------DOF2      --------->TOE2(3)                                --------->ARR14(2)    <-------TEIL                                       <-----------ARR10   --------->ARR14(1)           ------>ZmHOX2a(2)      <---------ARR11(1)  <---------GLK1(2)           --------->ARR11(3)       <---------ARR14(2)  --------->ARR14(2)  --------->ANAC46                 ------->TEIL  <---------ARR14(2)  <---------ARR14(2)--------->ANAC46                  <---------CCA1(2)--------->KAN4(2)    <-------- ->AHL20(2)----------->GT1    <---------ARR11(3)      <---------ARR14(1)                   ---------- ---------->ARR10  --------->TOE1(2)          ---------->DOF2        --------->ARR14(2)   *TSS  -----   cctagattcgttaaagttaaacacacgacgatgatctgattttgtattgaaaggtcgtatctttgtagtcggatattctcaagttttttgaactaaagtt  1624600                                                                               <------------CBF                                                                              --------->ATHB51                                                                           --------->YAB1                                                                         <-----------TBP                                                              <---------MYB52(1)   <---------ANAC46                                                            <---------ANAC46  <---------ICU4                                                 <---------MYB52(1)   <---------ANAC58                                               <---------ANAC58       <---------ANAC58                                               <---------ANAC46 <---------MYB46(3) <---------ANAC58 -TOE2(3)                                <---------AHL20(2) <---------ANAC58 <---------YAB1        -- >DOF2                              <----------DOF2         <---------ANAC58 <---------AHL20(2)  <--- ------>GT1 --------->YAB1  <---------AHL20(2) <---------ANAC58 --------->MYB52(2) <---------ANAC58--   gaaaaacagagtaatcagaatggagcctaataaaacgtcttttttaattccgttttgtttttgcgtttgttagcgttttataattgcgtttgtgaatgac  1624700         ------->TEIL                                                             <---------MYB52(1)      <---------YAB1                                                            <---------ANAC58  <---------DAG2                                                        <---------TOE2(3)  <----------DOF2                     *TSS                           <---------YAB1 ---->MYB46(1)         <---------ANAC58                     <----------DOF2     <---------ANAC58 ------MYB59           <---------ANAC58       ----------->GT1       --------->TOE2(3) ---->MYB83            <---------GLK1(2)  <---------YAB1   <---------ICU4       <---------ANAC46 <---   caaactttatgaatcttcttctatagcttctctctctgaacttcatcaatgtaaatttcaatcttttcttcattaatgtgttccgtttgattttgtttct  1624800                                                                                     <---------TOE1(3)                                                                                     <---------TOE2(3)                                                                               --------->AHL20(2)                         <---------YAB1                               <---------ANAC58              <---------TOE2(3) <-----------GT1               <---------YAB1   <---------ARR11(3)  --------->ZAT14  <------MYB83<-----------GT1              --------->YAB1   --------->ANAC58  <---------ZAT14  <------MYB46(1)                         --------->ICU4    --------->ANAC58 ------ZAT14  <---------YAB1  <---------AHL20(2)   --------->TOE2(3)  <---------ANAC58        <------ZmHOX2a(1)   tcagtgaaatgaaattgagattggtttctgattttatcttcttgccagtgaaaccctagtaattgtgattttgctgggcaagaaattagggttttaggag  1624900                                               --------->ATHB12                                              <---------YAB1                ----------->GT1             ------>ZmHOX2a(1)      <---------ANAC58                      <---------At4g35610      <---------ANAC58                  <---------ARR14(2)                                     <-----      --------->ANAC55(2)               --------->ARR14(2)    --------->ARR11(3)            <--------      <---------ANAC55(2)         <----------DOF2<---------WOX13(1)         <-----------HVH21 -------    <-----------GT1   ---------->DOF2<---------TOE2(3)        <---------ARR11(3)          --------->GLK1(2)   gttttgttacttactcaagagtgaaaaagatggaagctttaggttcctctgattgcaatttagagattttagaaactctatcagacgatgcgattcagga  1625000                        --------->ZAT6                        <-----------GT1               <---------WOX13(1)                                 --------->MYB52(2)     ---------->DOF2  <-----------GT1                       --------->GLK1(2) -ZmHOX2a(1) --------->YAB1                    <---------ANAC46 ------>ZmHOX2a(1) ---RAV1(2) --------->ICU4     --------->ZAT14 <---------ANAC58 <---------MYB52(1) -->LBD16   <---------YAB1     <---------ZAT14 <---------ANAC58--------->TOE2(3)   gattactgaaagctatgatggatttttcactactgtagagtctctcattgctggtactggagattccttagttgaagatgagtttgtgtctcatgtgtat  1625100  Previous    Next  AGI:  At2g04650.1    Description:  ADP-glucose pyrophosphorylase family protein. similar to ADP-glucose pyrophosphorylase family protein [Arabidopsis thaliana] (TAIR:AT1G74910.1); similar to ADP-glucose pyrophosphorylase family protein [Arabidopsis thaliana] (TAIR:AT1G74910.2); similar to putative GDP-mannose pyrophosphorylase [Linum usitatissimum] (GB:ABF48494.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64404.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14878.1); contains InterPro domain Nucleotidyl transferase; (InterPro:IPR005835); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro Range:  from: 1621785    to: 1624590    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g04660.1    Description:  APC2 (anaphase-promoting complex/cyclosome 2); ubiquitin-protein ligase. similar to CUL4 (CULLIN4), protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G46210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48355.1); similar to H0805A05.11 [Oryza sativa (indica cultivar-group)] (GB:CAH67481.1); similar to Putative anaphase promoting complex protein, identical [Solanum demissum] (GB:AAT66764.1); contains InterPro domain Anaphase promoting complex subunit 2 (InterPro:IPR014786); contains InterPro domain Cullin homology; (InterPro:IPR016158); contains InterPro domain Cullin, N-terminal region; (InterPro:IPR0 Range:  from: 1624738    to: 1629159    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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