Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->MYB52(1)    --------->ZAT14   ----------->RAV1(1)   <---------ALFIN1 ----------->RAV1(1)                       --------->ANAC58 ---------ALFIN1                         ---------->DOF2 ------->At4g35610                     --------->ANAC58 -----At4g35610         --------->MYB52(1) --------->ANAC58                               ---------->DOF2 ---->ZAT2      <---------ARR11(3)     --------->ANAC58 --------->ATHB12              <------ZmHOX2a(1) ---->At4g35610 --------->ARR11(3)---------->DOF2      --------->ICU4       --------->ATHB12   ------   cagcaccacagtaacgaagagcttgaaaacggagaagaaagacgaaagcaagaaggaatgatttagcgagtaagagtttgatttgagaggaagaaagaga  1612500          --------->DAG2                                                           ---------->DOF2         ---------->DOF2                                                       ---------->DOF2       <------ZmHOX2a(1)                         <----------DOF2     --------->CCA1(2)     <---------TOE2(3)                       <----------DOF2---------->DOF2  <---------ZAT6      ---- --->CCA1(2)                         ---------->DOF2   ----------->GT1 <---------YAB1           <----   tgaaattgaggaaaaggaacgattttgaagacggagaagaaaagggtctttctttgaaggtgaaaaggaagagatgatagtgaaagaaagtgagaagagg  1612600                                                                                    ------>ZmHOX2a(2)                                                                                   <------ZmHOX2a(2)                                                                                   --------->CCA1(2)                                                                                  >>>>>>>>>GATA-3                                                                                  >>>>>>>>>GATA-2                                                                                  --------->AGP1                                                                                  >>>>>>>>>GATA-4                                                                                  >>>>>>>>>GATA-1                                                                                  <---------ARR11(3)                               ---------->DOF2                                    --------->ARR11(3)                        ---------->DOF2                                          --------->GLK1(1)           --------->CCA1(2)<----------ID1                    --------->DAG2---------->DOF2 ------>DOF2         <------ZmHOX2a(1)       ----------->GT1---------->DOF2 <---------ZAT14 --ZmHOX2a(1)    <------ZmHOX2a(1)     ---------->DOF2 --------->TOE1(2) ----------->GT1   aaagagagaagagagacgaggaaggagaaagggaaaagagagaaagaaggtgaagaacgaaggaaaggtaagagagagtaaagagatctaagagagaaga  1612700                                            ------>ZmHOX2a(2)     --------->CCA1(2)             -----                             <---------ANAC58         >>>>>>>>>TBF1                             <----                             <---------ANAC58  <XXXXXXXXXXXXXXXXXXXXMIR838            <------MYB83                       --------->ATHB12     =============HOX2a_HOX2a                  <------MYB46(1)                      <---------YAB1    =================HOX2a_HOX2a       <---------HSFB2a(2)<------               ---------->DOF2   <---------AtLEC2 <------ZmHOX2a(1) <---------ANAC46<--------P<------    ---------->DOF2   --------->ICU4    ------>ZmHOX2a(2)>>>>>>>>>TBF1     --------->HSFB2a(2)<------   gaatgagaaagagaaatgaaagtgatgatttgcttccatggatcgatctgtaggaagaagaagaagagagacgggttttggaaggggttggagttggagt  1612800                                    <---------------AtSPL8                                    <---------------AtSPL3                      --------->YAB1                                  <---------MYB46(3)                           --------->ICU4                                <---------ANAC58                               <---------YAB1                                <-------GAMYB                                --------->YAB1                                <---------ANAC46                            --------->ICU4                                <---------ANAC58                            <---------YAB1                               --------->MYB55(2)                         --------->YAB1                               <------MYB46(1)                           --------->ICU4         <---------ANAC46      --------->MYB52(2)                        <---------YAB1       --------->ATHB12        <---------MYB46(3)                      --------->YAB1    --------->MYB46(3)      --------->ICU4          <---------AtMYB61                     --------->YAB1 --------->YAB1 ---->ALFIN1               <---------MYB46(3)                       <XXXXXXXXXXXXXXXXXXXXMIR414 -----ZAT6                 <-----------RAV1(1)         <------MYB83<---------YAB1 <---------YAB1 ---ANAC58               <---------MYB52(1)            <------MYB46(1)<---------YAB1     ------>ZmHOX2a(2) ---ANAC58             <---------YAB1 <---------SPL7  --------->MYB59 --------->ICU4 <---------YAB1<- ---ANAC46    <---------KAN4(2)<------MYB83 ---------->DOF2        --------->ICU4 --------->ICU4<----   gtaagggaatgatgggtatgttcttccgattgttggttgtggtactgaaagacgattaggtcgatgttgatgatgatgatgatgatgatgatccaccatt  1612900                                         --------->LBD16                                       --------->ATERF1(1)                            --------->HSFB2a(2)                            <---------HSFB2a(2)                           <---------LBD16<------NtERF2              <----------DOF2--------->LBD16 <------ZmHOX2a(1)            --------->HSFC1(2)       <---------DEAR3(1)           <---------YAB1            <---------HSFC1(2) <----------CDC5                   <---------ARR11(3)         <--------        --------->LBD16  <-----------GT1--------->DEAR3(1)     <---------YAB1      <---------ZAT2      <---------LBD16--------->ARR11(3)<---------LBD16         --------->ICU4      <---------At4g35610 --------MYB46(3)    <---------ARR11(3)<------NtERF2      --------->ANAC58         --------->At4g35610 -------RAV1(1)    <---------TOE2(3)--------->ATERF1(1)   --------->ANAC58       --------->ZAT18   gttgttgatgcggaagcttttgagatttttcccgatgagtcgccggaggaaattttcgtcaagacatgatttttgtgattttgtgagctgtttactttga  1613000                                                                                   --------->DAG2                                                                                  <---------ZAT14                                                                                  ---------->DOF2                   ------->GAMYB                                             --------->ARR14(2)                   <---------MYB59                                           <---------ARR14(2)                <-----------GT1      ----------->GT1                        --------->At5g28300            <<<<<<<<<<MYB80     --------->ARR14(2)                         <---------MYB46(3)           <------MYB83 --------->AHL20(2)                              ------------>MYB.PH3(1)  <---           <------MYB46(1)      <---------ARR14(2)                     --------->DAG2          <-----           <---------MYB46(3) --------->LBD16              ------------>CBF----------->GT1     <----- --DOF2<-----------RAV1(1)  <---------LBD16   --------->TOE2(3)       ---------->DOF2  --------->ZAT18   attccaaatttgttggtttaaccgaattaaaccggaaccgagtaatattcttaaatcaaaaatcaattttgcaaaagcggttactaaagtggtctaggcg  1613100                                                                                    --------->AHL20(2)                                                                                <---------AHL20(2)                                                                            <---------AHL20(2)                                                                           <---------AHL20(1)                                                                           <---------ARR11(3)                                                                           --------->AHL20(1)                                                                           --------->ARR11(3)                                                                           <---------AHL20(2)                                                                      ------------>CBF                                <---------AHL20(2)    <-------TEIL <----------DOF2  <---------AHL20(2) ----GAMYB                    ----------->TBP <------NtERF2<---------AHL20(2)   --------->AHL20(2) ----RAP2.6(2)       <---------YAB1           ------>NtERF2----------->TBP --------->AHL20(2) ----DEAR3(1)     <---------AHL20(2)  <---------MYB52(1)   --------->AHL20(2) <---------AHL20(2)   gtcgtctaaatcccatctatattatgacatctatataatcgttttgtccgcctaaattcatataaatttcttttcaatatatttttttaatttccaactc  1613200                                                           <---------AHL20(2)                                                         <---------AHL20(2)                                                        <---------AHL20(2)                                                        --------->ARR11(3)                                                        --------->AHL20(1)                                                        <---------ARR11(3)                                                        --------->AHL20(2)                        <--                                 ----------->GT1        <---------AHL20(1)                        ---                             --------->ARR11(3)        --------->AHL20(2)                     <------                             <---------AHL20(1)     <---------AHL20(2)                      <--------                             --------->AHL20(1)    --------->AHL20(2)                    --------->AHL20(1)                           <---------AHL20(1)      <---------AHL20(2)                    <---------AHL20(1)                     --------->YAB1            --------->AHL20(2)                    <---------AHL20(2)     <-----------GT1 --------->TOE2(3)         --------->AHL20(1)                   --------->AHL20(2)    --------->AHL20(2)     --------->AHL20(1)  <---------AHL20(2)             <-----------GT1<-------   caaaatttaactaataagttttatcttaatatatattgtttaatatgaattaattaaatatatttttgtctaatttttgtttactatttaatatttttat  1613300                       <---------AHL20(2)                     <---------AHL20(2)         <---------RVE1(1)        <---------ARR14(2)     --------->AHL20(2)        --------->ARR14(2)     <---------AHL20(2)    <---------At4g35610--------->AHL20(2)  <-----------GT1  <---------AHL20(2) -------AHL20(2)  --------->AHL20(1) ------>AHL20(2)  <---------AHL20(1)  <---------AHL20(2)                                         ---- ---AHL20(2)   --------->AHL20(2)    --------->AHL20(2)                                          ---- -AHL20(2)  <----------DOF2<---------AHL20(2)            <-----------RAV1(1)                    ----- --YAB1 <---------GLK1(2) <---------AHL20(2) --------->YAB1                                     <----   ttttttagcagatacttttatatatttttttatttaaaattttatatttataatgtcttatgttgtaaacgcttaaaccatctaaaatcgtttagactat  1613400  Previous    Next  AGI:  At2g04620.1    Description:  cation efflux family protein. similar to cation efflux family protein / metal tolerance protein, putative [Arabidopsis thaliana] (TAIR:AT3G12100.1); similar to cation efflux family protein / metal tolerance protein, putative [Arabidopsis thaliana] (TAIR:AT3G12100.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO14841.1); contains InterPro domain Cation efflux protein; (InterPro:IPR002524) Range:  from: 1610503    to: 1612899    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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