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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ALFIN1
<---------
TGA1a
<-----------
RAV1(1)
=================
MYC_MYB
<---------
At4g35610
<---------
ANAC46
<----------
DOF2
------>
NtERF2
===========================
bZIP_DOF
--------->
ZAT14
--------->
YAB1
<---------
MYB52(1)
--------->
At4g35610
<---------
ATHB12
--------->
ICU4
<-------
GAMYB
--------->
ZAT2
<---------
ZAT14
--------->
YAB1
----
ZmHOX2a(1)
<---------
bZIP60(1)
<---------
ZAT2
--------->
ZAT18
<---------------
>
At4g35610
--------->
bZIP60(1)
--------->
At4g35610
--------->
REM1(1)
<-------
GAMYB
-----
ggagaaatgataatgtgatgtgaggcagttagtctttaacttagctggtgcctattgtgctactccactgatgctatacctctgttgatagaatcataca
951500
--------->
AHL20(1)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
------>
ZmHOX2a(2)
--------->
ARR14(2)
-
------->
TEIL
<---------
AHL20(2)
--------->
AHL20(1)
<---------
AGP1
<---------
AHL20(2)
---------->
DOF2
--------->
ARR11(3)
<---------
ARR14(2)
--------->
ANAC58
<---------
AHL20(2)
<---------
ARR11(3)
------
WRI1
--------->
ARR11(3)
--------->
ANAC58
--------->
AHL20(2)
<---------
AHL20(1)
----->
DOF2
<---------
ARR11(3)
--------->
ANAC46
<---------
AHL20(1)
--------->
AHL20(2)
aagaagagtaatggatcttgacattatatttttggacaaaaccacaagcctcgagtaaagtttccaattttttttttgatatttagacaaatatatcaaa
951600
<---------
YAB1
<-----------
GT1
--------->
ARR11(3)
<-----------
GT1
<---------
GLK1(2)
<---------
ICU4
<---------
ARR11(3)
<-------
TEIL
<---------
AHL20(2)
<----------
<---------
ARR11(3)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<-----------
GT1
<---------
AHL20(2)
<---------
AHL20(2)
<-----------
GT1
---------->
GT1
--------->
YAB1
--------->
AHL20(1)
<---------
AHL20(2)
aatggtgatttactaaatcttatactaactataaaaaattcattaccatctaaattttttaatgctagattttcattttttttttcattttttttcttca
951700
<-----------
GT1
<---------
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(1)
--------->
DAG2
--------->
AHL20(2)
---------->
DOF2
<-----------
GT1
<---------
ANAC55(2)
<-------
TEIL
----------->
GT1
--------->
TOE1(2)
---------->
DOF2
--------->
CCA1(2)
-------
-
GT1
--------->
TOE2(3)
--------->
ANAC55(2)
---------->
DOF2
--------->
ALFIN1
--------->
MYB52(1)
caaatgtaacattatattaaacattcgatacaatacataaccaaaacaaaggcccttaaagagatacagaaagtggaggctcaaactagcctataacggg
951800
------>
ZmHOX2a(1)
--------->
ARR14(2)
<---------
ANAC55(1)
--------->
ANAC55(2)
<---------
ANAC46
<---------
ANAC58
--------->
CCA1(2)
<---------
ANAC58
----------->
TBP
<---------
ANAC58
--------->
DAG2
<---------
ANAC58
---------->
DOF2
<<<<<<<<<<
ABI3
------->
TEIL
--------->
AHL20(1)
<<<<<<<<<<
FUS3
------->
GAMYB
----------->
GT1
--------->
ARR11(3)
--------->
MYB52(1)
----------->
TBP
---------->
DOF2
<---------
ARR14(2)
>
GAMYB
---------->
DOF2
<---------
MYB52(2)
<---------
AHL20(1)
<---------
ARR11(3)
ccaaatttgttttgaaaatataaaagaacgggcctataacgaacttataaaaaggctaatatataagcccattaaaagataatgcatgcgtgtcctctaa
951900
<----------
DOF2
--------->
TOE2(3)
*
TSS
<---------
REM1(2)
------>
ZmHOX2a(1)
--------->
YAB1
<----------
DOF2
--------->
At4g35610
<---
------->
TEIL
--------->
MYB46(3)
<-----------
GT1
<---------
At4g35610
------
cttgaacccttactactaacaaacatatc
gttctctttactttctcttcttcacagcaaactaatcctcaaaccattctctcaagctcgtcttcttcctc
952000
---------->
DOF2
--------->
AtLEC2
--------->
ANAC58
--------->
ANAC46
<---------
ANAC55(2)
--------->
ANAC58
--------->
ANAC55(1)
--------->
ANAC58
<-----------
GT1
--------->
ANAC55(1)
<---------
AHL20(2)
--------->
ANAC46
<----------
DOF2
--------->
ANAC55(2)
<---------
DAG2
<---------
ANAC55(2)
---------->
ID1
------>
ZmHOX2a(1)
--------->
ANAC58
--------->
GLK1(1)
<-----------
GT1
<---------
ANAC58
--------->
ANAC58
------
CCA1(2)
<-----------
GT1
<---------
ANAC46
--------->
ANAC58
>
ZmHOX2a(1)
<------------------------
ANAC81
<---------
ANAC58
<---------
REM1(2)
tatctgtgatttctagggttttgttttttccctttttaatctctcaattgcttagtctcttcctcttctctcaacacgtaagacacgcaaagaagaaaca
952100
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
-----
--------->
AHL20(2)
<------
<---------
AHL20(2)
-------
<---------
AHL20(1)
-------
<---------------
AtSPL3
<-----------
GT1
<------
--------->
DAG2
--------->
AHL20(2)
<---------
ARR14(2)
-------
---------->
DOF2
<---------
AHL20(1)
--------->
YAB1
<------
<------
MYB46(1)
--------->
AHL20(2)
<---------
ATHB12
<------
<--------
P
<---------
MYB52(1)
------>
ZmHOX2a(2)
=======
<-----------
GT1
<------
MYB83
<---------
AHL20(2)
<----------
DOF2
------->
TEIL
<------
atttttcaatcttcttgtag
gtaaagtccgtcaatttaatttaattttactcgcttgatcgaatcatgtatgtgaattcgaaattgtagtttagggacgt
952200
------>
GT1
---
ANAC58
-->
O2
<---------
MYB52(1)
---->
GT1
---
O2
<-------
GAMYB
-->
TGA1a
---
ANAC46
<---------
YAB1
---
ANAC58
--------->
ARR11(3)
--------------->
AtSPL8
==============
MYC_MYB
<---------
ARR11(3)
<---------------
AtSPL8
---
TGA1a
<-------
TEIL
<---------
YAB1
<---------
YAB1
---------->
DOF2
<-----------
GT1
gaaaatttcggttgattcatgttgtttttttgataaatctttgttattgttcgttcttcgtattatctctcaaagaatgtactaactaaaattacaaaat
952300
--------->
ANAC55(2)
------->
GAMYB
<---------
ANAC55(2)
--------->
At4g35610
--------->
CCA1(2)
<---------
ETT(2)
--------->
ARR11(3)
--------->
ETT(2)
--------->
ANAC58
<---------
ARR11(3)
<---------
WRKY38(1)
--------->
KAN4(2)
<------
ZmHOX2a(2)
<-------
TEIL
<---------
WRKY12
--------->
ANAC58
---------
--------->
At4g35610
--------->
WRKY18(1)
----------->
GT1
<--------
tgaaaccag
atgcatagagatatgtattcttcaagaggcactggctacggtcaacagcaatacggttcgcaatctggttattctcagaat
gtaagatcat
952400
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AGI:
At2g03150.1
Description:
EMB1579 (EMBRYO DEFECTIVE 1579); binding. similar to hypothetical protein OsJ_020850 [Oryza sativa (japonica cultivar-group)] (GB:EAZ37367.1); similar to hypothetical protein OsI_022585 [Oryza sativa (indica cultivar-group)] (GB:EAZ01353.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)
Range:
from: 951930
to: 959185
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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