Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------------AGL15                ------>ZmHOX2a(1)        --------->AHL20(2)               --------->TOE1(3)        <---------ARR11(3)            --------->ARR11(3)          <---------AHL20(1)            <-----------GT1--------------->AGL15            <---------ARR11(3)          --------->AHL20(1)       --------->AHL20(2) <-----------------AGL3 -------->LBD16--------->TOE2(3)        --------->ARR11(3) ------->HSFB2a(2)  --------->ZAT6----------->GT1      <---------HSFB2a(2)      ---------->DOF2 --------HSFB2a(2) <---------YAB1----------->GT1       --------->HSFB2a(2)--------->ARR11(3) ---ATHB12 --------->CCA1(1)  --------->DAG2 <---------AHL20(2)           <---------ARR11(3)   <----- >WOX13(1) --------->RVE1(1) --------->ICU4  --------->AHL20(2)     --------->AtMYB61     --------->MYB59   tccagaatataaaatatccttatcagtagcaaaaattggaaaaatatttatattgttttagaaaattggaccaaaacatctctaaaggagattaggcctt  837400                                                <---------AHL20(2)                                               --------->AHL20(2)            <----------DOF2                                --------->AHL20(2)                  <-----------ARR10                                <---------AHL20(2)                 ------>MYB83                               --------->AHL20(2)                  ------>MYB46(1)       <----------DOF2 -----DOF2         --------->MYB59     ---------->DOF2    --------->AHL20(2)<-----------------AGL3---   tctactagctaaacaatggtttaggtctccagatttatttagaaagacattaaatgtgaattaaaaaccaaatctaactctttttttggttctttaacca  837500                                      <-----------ARR10                                      <---------ARR14(2)                                 --------->ANAC58                                 --------->ANAC58                                            <-------GAMYB                               ---------->DOF2<---------AHL20(2)           <---------DAG2   <--------                             --------->MYB46(3)                            <----------DOF2  ---------                         <---------MYB52(2)   --------->ATHB12          <-----------GT1     ---------                        <---------At4g35610  --------->AHL20(1)        <---------AHL20(1)   ---------                        --------->At4g35610  <---------AHL20(1)     --------->AHL20(2)    <---------MYB52(1)           <----------DOF2 --------->MYB52(1)<---------AHL20(2)    --------->AHL20(2)   <---------ANAC58  --------->AHL20(2) <---------At5g28300     --------->AHL20(2)    <---------AHL20(2)   <---------ANAC58 ------>AHL20(2)    <-----------GT1   --------->GLK1(2)           --------->AHL20(2)    <---------ANAC46   aaaaataaaaactcttttttttttacagctaaccaaagcaaatctaatttattggaaaaatacccaaaattaatatacttttttttttttgcgttagttg  837600                                                                                     <---------AHL20(1)                                                                                     <---------AHL20(2)                                                                                   <---------YAB1                                                                                 --------->YAB1                                                                                 <---------ICU4                                                                                <---------YAB1                                                                                --------->ICU4                                                                              --------->YAB1                                                                              <---------ICU4                          --------->TOE2(3)                                  <---------YAB1                        --------->ICU4      --------->ATHB12              <---------AHL20(2)                   ----------->GT1          --------->ATHB51              <---------YAB1                 --------->ICU4            <---------AHL20(2)           <---------ICU4           ---- -MYB46(3)  --------------->AGL15          <---------YAB1            <---------AHL20(2)   --------->AHL20(2) >MYB52(2)  <---------------AGL15      <---------DAG2               --------->AHL20(2)    <---------AHL20(2) >MYB46(2) <-----------------AGL3      <----------DOF2              <---------AHL20(2)<---------YAB1 >MYB55(2) ----------------->AGL2<-----------GT1            ---------->DOF2  --------->ICU4      <---   atatagttttggttctctaattagtaattcttaattttcaactttataattggtgaatgaaaaaaagaaattaaatattattattattatttttaatttt  837700            --------->AHL20(2)           <---------YAB1        <---------YAB1                         <---------AHL20(2)                    ----------->GT1        <---------AHL20(2)                 --------->AHL20(2)                       --------->DAG2       <---------AHL20(1)                  <---------AHL20(2)                      ---------->DOF2  <---------AHL20(2)                      --------->AHL20(2)                <---------YAB1  --------->AHL20(2)                 --------->AHL20(2)      --------->AHL20(2) <---------AHL20(2) --------->YAB1                  <---------ANAC46   <-----------GT1        --------->AHL20(2)      <- ----->AHL20(2)               <-----------GT1 <---------AHL20(2)           <---------AHL20(2)-------- ------AHL20(2)        <------------CBF   <---------AHL20(2) <---------AHL20(2) --------->AHL20(2)---   taattttaatattattatttagtcaaattgattttccgtttaaatttttttatttgactgcattaaaatttgcatattaaaattaaaaagttaacaaaag  837800                                                             <---------At4g35610                                                     <-----------GT1 <---------KAN4(2)                              --------->ARR11(3)                        <---------GLK1(2) -----ZmHOX2a(1)          ---------->DOF2       <---------ARR11(3)          ---------->DOF2       <-- -->DOF2   *TSS     ----------->GT1         ---------->DOF2  --------->At4g35610        <---------YAB1 -------->GT1     ----------->GT1      ------>ZmHOX2a(1)<----------DOF2    --------->AtMYB61      ---   aggaataaacaagagagagagagagaaaaaaagaattgttcctctcaaaagattttaactttgagctctctgagaaaccaaagcttcactctgattcgct  837900                                                                                    <---------YAB1                                                                                   <---------AHL20(1)                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                                  --------->YAB1                                                                               --------->YAB1                                                                               <---------ICU4                                                                              --------->ICU4                                                                              <---------YAB1                                                                            <--------HAHB4                                                                            -------->HAHB4                                                                            <---------AHL20(2)              ----------->RAV1(1)                                           -------->ATHB1             --------->ANAC58        --------->ANAC58                       --------->ATHB51             ----------->HVH21       --------->ANAC58                       <---------ICU4             --------->ANAC58      --------->CCA1(2)                        --------->YAB1           --------->CCA1(2)      --------->ARR14(2)                       --------->ICU4      ---------->DOF2             <---------ARR14(2)              <----------DOF2<---------YAB1    --------->YAB1             >>>>>>>>>TBF1          --------->At4g35610  <---------ATHB51 -------HSFB2a(2)           >>>>>>>>>TBF1             <---------At4g35610  <---------YAB1 ------>HSFB2a(2)    ---------->DOF2<-----------------------TaNAC69(2)--------->TOE2(3)  <-----------GT1   ctcgaatcaaaagagacgacagagaaagaagaagaagaaacgcgaagaacagaaacagctctcttaagcttttcttaattattattataattttctcttc  838000                                                                    <---------MYB52(1)                                                                  ----------->GT1                                                               --------->GLK1(2)                                                           --------->YAB1                                                          <---------YAB1                            <                                                         <---------AHL20(1)         <---------MYB52(2)                                                         <---------AHL20(2)    <---------ATHB12  <---            <---------ANAC55(2)                          --------->AHL20(1)  --------->WOX13(1) <----        <---------ARR14(2)                               --------->AHL20(2)<---------YAB1  ------>MYB46(1)        --------->ARR14(2)                              --------->YAB1   --------->YAB1    ------>MYB83       <---------CCA1(2)                               <---------YAB1    <---------ICU4  <---------MYB59    --------->LBD16                               <---------At4g35610   --------->ICU4   --------->AtMYB61   ttaatccccaaatctcgtaagtctctcttctccaatctctgattcgtttctctgcttattataataatctgttaattatcaatcaaacaaaccaaacccc  838100                                          ----------->HVH21                  --------->ARR14(2)    <-                                        <---------At4g35610                  --------->GLK1(2)     <-                                        --------->At4g35610      --------->At4g35610              <--                                        <---------ZAT2           <---------At4g35610              ---                                        ----------->RAV1(2)   --------->RAP2.6(3)                ----         --------->ZAT6                 --------->ZAT2       <---------ARR14(2)  --------->LBD16 ----     <---------AHL20(2)               <-----------RAV1(2)    --------->ARR14(2) <---------LBD16------ ---------YAB1             --------->AHL20(2)           ------->TEIL         <---------ARR14(2)<----- -------DOF2               <---------AHL20(2)<---------WOX13(1)------>ZmHOX2a(2)<---------ANAC46 ---- -----DAG2   ---------->DOF2   <-----------GT1    <-------TEIL<------ZmHOX2a(2)<---------LBD16<------   ttttgattttatctctaaagtatcaatttttaatttctcttcagctgatggattcatgaaccagatcggctgatttgagtttccgggtttgatttttttc  838200                                  <---------AGP1                                  <---------ARR11(3)                                  --------->ARR11(3)                                  <---------ARR14(2)                                  --------->ARR14(2)                              ------>ZmHOX2a(2)                             --------->CCA1(2)                                                    ---                            --------->ARR11(3)                                                    <--                            <---------ARR14(3)                                              <--------                            --------->AGP1                                                  <------MYB46(1)                            <---------ARR14(2)                                              <------MYB83                            <---------AGP1                                                <---------WOX13(1)                            --------->ARR14(3)                                          <---------MYB46(3)                            <---------ARR11(3)                  <----------DOF2         --------->ATHB12 --------DAG2               --------->ARR14(2)                 <---------ANAC58      <------MYB46(1)< ---------DOF2             --------->GLK1(1)                   <---------ANAC58      <------MYB83 --- -------------AGL15 --------->GLK1(2)                    <---------ANAC58            --------->ANAC55(2) ------------>AGL15 <---------ARR14(2)    --------->DAG2 <---------ANAC55(2)         <---------ANAC55(2) ------------->AGL1 --------->ARR14(2)   ---------->DOF2 --------->ANAC55(2)        --------->MYB59-- ----------->AGL15 <---------GLK1(2)------>ZmHOX2a(2)    <---------ANAC58           --------->MYB46(2) ---->ID1        <------MYB83<------ZmHOX2a(2)           <---------ANAC55(1)    --------->ATHB12  <-- ------GT1     <--------P ----------->ARR10              <---------ANAC46      <---------YAB1   ----- ------------->AG<------MYB46(1) <---------CCA1(2)   <---------DAG2        <---------GLK1(2)--------- -----GT1     <-------GAMYB<---------GLK1(1)         <----------DOF2   ------->TEIL --------->MYB111(1)   cctttttgtgaaattgggttggaatctggagatctggatcttataaagctggaaactttacgtgtgcttgatgaaccgattttgattaggtgattggtta  838300  Previous    Next  AGI:  At2g02870.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At2g02870 [Arabidopsis Thaliana] (GB:Q8L736;GB:O80606); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G14330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48419.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro Range:  from: 837811    to: 840128    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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