Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ZAT6                                                               -------->P                                                      <---------HSFC1(2)                                                      --------->HSFC1(2)                                                      --------->HSFB2a(1)                                                   ---------->DOF2                                                 <---------HSFB2a(2)                                                 --------->HSFB2a(2)       <----------DOF2                        ------>ZmHOX2a(1)------>MYB83     ------>MYB46(1)                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     ------>MYB83          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->MYB46(3)       <---------TOE2(2)   <---------MYB59--------->GLK1(2)     <-------TEIL <-----------ARR10   ----------->RAV1(1)        < -------->P   --------->YAB1  <xxxxxxxxxxxxxxxxsmallRNA(i)     ------>MYB46(1)           <---------TOE1(2)   acttaccaactttcaaggagaatcgaactcgggtctaagagtttcatccttcccaaagcttcccctaccactaaaccacatatacttggcctaggttgaa  689400                                                                                             --------                                                                                           <------MYB46(1)                                                                                           --------->MYB52(2)                                                                                           <---------MYB46(3)                                                                                           <------MYB83                                                                                          --------->MYB55(2)                                                                                          <---------MYB46(3)                                                                                          --------->MYB111(1)                                                                                          <---------AtMYB61                                                                                          --------->MYB111(2)                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                        <-------GAMYB                                                                                       --------->MYB52(2)                             <---------ATHB12                                          <---------MYB46(3)                     <---------ANAC58             --------->AHL20(2)                   <------MYB83                     <---------ANAC58  <---------AHL20(1)                              --------->MYB55(2)                   <-----------GT1     --------->ARR11(3)         --------->MYB52(1)   <------MYB46(1)               <---------AHL20(2)      --------->AHL20(1)       --------->MYB46(3)<---------AHL20(2) ----------DOF2--------->AHL20(2)     --------->YAB1           ------->TEIL--------->ZAT6<--------P   aactttcagtgatacaattttttacttgctaatcgttcaaaaatattgaccataaattgtcgatgaaccaatggctaacactatttagttggttggtcgc  689500                           --------->ANAC58                           --------->ANAC58                 <<<<<<<GRF7               ----------->HVH21                                        <---------ANAC58             ----------->RAV1(2)      ---------->DOF2      ---------->DOF2       <---------ANAC58   --------->DAG2             <------ZmHOX2a(2)  <---------ANAC58         ---- -->ID1<---------ANAC58  ---------->DOF2  --------->ARR11(3)           --------->ATHB12     ---------   aatcgcatagcatgtccctgacacaaaaaaagcaaacaaaaaaagaactacttggatcaaacaaagaaacccatgcttgggctcagactgaaaacaaagt  689600                           ------>MYB46(1)                           ------>MYB83                                     --------->MYB46(3)                         ------->GAMYB                                    --------->MYB52(1)                        --------->DEAR3(2)                         -------->P------->GAMYB     <-----                        --------->MYB46(3)                     --------->ANAC46               -------  <----------ID1      --------->MYB52(1)                       --------->ANAC58------>MYB83 <-------- ----->ATHB12         <-----------GT1   ----------->RAV1(1)    --------->ANAC58------>MYB46(1)------- ->DOF2           <---------ZAT6<---------ATHB12             <-----------GT1--------->DEAR3(2)-------   aattgggccaaacccatttagtattaaccgactaatcaagtccaacaatgtacagcatgaaataaacgctacccattaaccgactcaaatcgcaccaagt  689700       --------->AHL20(2)                                                                           -       <---------AHL20(2)                                                                          <-      <---------ATHB12                                                                    <---------ANAC55(2)  ------------>CBF                                                                        --------->ANAC58 ------HVH21       --------->ANAC58                                                       --------->ANAC58 -->ANAC58         --------->ANAC58                                                      --------->SPL7 -ALFIN1       <---------ALFIN1                                  ----------->GT1         <---------LBD16 -->ANAC58    <---------REM1(2)               ------>ZmHOX2a(1) ----------->GT1        *TSS---------- -->ANAC46   ------>ZmHOX2a(1)   ---------->DOF2 ------>ZmHOX2a(1)             <----------DOF2    <--   caggcccaattaatcctacacaggcccatttagaagaaagttaacttcctccttaagaagagagaagggctaaaaatcaagctttcacgagtacggaaat  689800                                                                           <---------GLK1(1)                                                                           --------->GLK1(1)                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                               --------->AtMYB61                                                            --------->DEAR3(1)    --------->ARR14(2)                                      --------->AtMYB61    <---------ARR14(2)                           --------->LBD16    ------>MYB83                    -    <---------ARR11(3)                          --------->ANAC58    ------>MYB46(1)                 -    <-----------ARR10              --------->ZAT14          <---------ALFIN1<---------HSFB2a(1)    <-    --------->ARR11(3)        ------>ZmHOX2a(1) --------->ANAC58  <---------MYB111(1)              -- -------->ZAT6           <----------DOF2        --------->ANAC46  --------->AtMYB61               <-- --------At5g28300    <-----------GT1       ------>ZmHOX2a(1)  <---------ALFIN1                 ----- ->GT1    ------>ZmHOX2a(1)  --------->TOE2(3) <---------LBD16--------->MYB46(3)              <------ ---------GT1   <----------DOF2    <---------ZAT18         --------->MYB46(3)     <------NtERF2 <----   ttacagtatctcctccatctttttttactttcctcagagctctctcctctccgcaacttccaccaccaccaaatcggaactctcggcgttctactccgtc  689900        --------->TOE2(2)    <---------MYB52(1)    --------->DOF5.7(2)   <----------DOF2   <-----------HVH21 ----->NtERF2                                                         --------->DAG2 -------->LBD16                                                  ------>ZmHOX2a(2)                  - --------DEAR3(1)                       <---------ZAT6   <---------DAG2                          <--- ------->ANAC46              <---------TOE2(2)           <----------DOF2                  --------->DOF5.7(2) -------LBD16<---------MYB52(1)        <---------TOE1(3)<---------ANAC58                 --------->TOE2(3) ---->ARR14(2)               <---------TOE1(3)          <---------ANAC58      --------->ICU4<-------- -----HVH21 --------->LBD16  <---------TOE1(2)        <-----------GT1---------->DOF2     --------->TOE1(3) -----ARR14(2)              <-----------RAV1(2)  <----------DOF2<---------WOX13(1)      <---------ZAT6   tccggcgttacctccgtcgatttcatcttctcaggttacttagggttacctcttttttgctttttgatcgataaagtgtgatgatgtctagcgttaactc  690000                                            <----------DOF2                                        <---------ARR14(2)                                     <------NtERF2                                    ------>NtERF2                                   <---------ANAC46                                  --------->ATERF1(1)                                    --------->YAB1                                  <------NtERF2                       --------------------->WRI1                                 <---------ATERF1(1)                  <----------DOF2  ------->TEIL --------->ID1               <---------AtMYB61               ------>MYB46(1)  ------>ZmHOX2a(2) -------DOF2                 <-----------RAV1(1)             ------>MYB83   --------->ARR11(3) -DOF5.7(2)       <---------ZAT6<---------DEAR3(1)         <---------MYB59  <---------ARR11(3)   ttttcgtcttcgtagtcgtagtcttagggttttggtggcgacgatactttgatttatcaaaccgaacttcttctttgtgatcttcgatgaatcaaaagtt  690100                                     <---------AHL20(2)                           --------->ATERF1(2)                           <---------ATERF1(2)                          <---------LBD16                          --------->DEAR3(2)                         <---------At5g28300                <------MYB46(1)      --------->AHL20(2)                <------MYB83      <---------ICU4               <---------TOE2(3)  <--------HAHB4               --------->MYB59   <---------YAB1                 --------->ZAT6           <---------AHL20(2)    <---------ATHB51             <-----------GT1          --------->AHL20(2)     --------->ICU4             <----------DOF2          <---------AHL20(2)--------->LBD16         --------->HSFC1(2)                              -      --------->ARR11(3) --------->MYB52(1)         <---------HSFC1(2)                     <---------      <---------ARR11(3)<-----------GT1             --------->HSFB2a(1)   <----------DOF2 <----------   ttctaagggatattaattaggttttgttaccggcgataattaatccatcttcgatgcttcttctttacacttctgactttgtttctgatgttttaacctc  690200                                                                                           ==========                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                                                                          ===========                                                                                         --------->AGP1                                                          <---------GLK1(2)              --------->ARR14(2)                                                       <---------WOX13(1)                <---------ARR14(2)                                                       <--------P                        --------->ARR11(3)    --------->ARR11(3)                               --------->ATHB12                    <---------ARR11(3) -------->REM1(2)          ----------->HVH21    --------->ANAC58              --------->ICU4 --GT1          ----------->HVH21               --------->ANAC58    <-----------GT1     <---------GLK1(1) -GT1         ----------->GT1                <---------WRKY12   <----------DOF2  ------->TEIL      --   tgtggagagcttgatagagtgacattgctctgactaagcgttttagttcaacgcatggttgattctctttttactaagtaatgaattttgagatccttgt  690300  Previous    Next  AGI:  At2g02560.1    Description:  CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED); binding. similar to hypothetical protein OsI_005862 [Oryza sativa (indica cultivar-group)] (GB:EAY84629.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46917.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ76083.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain TATA-binding protein interacting (TIP20) (InterPro:IPR013932); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 689787    to: 697595    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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