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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                     <---------AHL20(2)
                          ----------->GT1                                            <---------ICU4
                    ---------->DOF2                                                 --------->AHL20(2)
                 --------->YAB1                                                     <---------------AGL15
        <---------ICU4  <---------ARR11(3)                                          ================
       <---------YAB1 <---------YAB1                                             --------->AHL20(2)
     <---------ICU4 --------->YAB1                                               <---------AHL20(2)
-------AHL20(2) <---------YAB1     <---------AHL20(2)                    ----------->GT1
----->AHL20(2)------>ZmHOX2a(1)  <---------AHL20(2)                      <---------ANAC46          <
-->GT1--------->TOE2(3) --------->ARR11(3)                  ----------->GT1     --------->AHL20(2) -
 
aaaattcaacattattcctataataaagatagttatatttttttttttgcaaaataagaaatatagttattttgttttgtgaaattaataaatatagtta  660300
             ------>ZmHOX2a(1)                                         --------->ANAC58
             <----------DOF2------>ZmHOX2a(1)                          --------->ANAC55(2)
          ---------->ID1    --------->LBD16                            --------->ANAC46
       --------------->AtSPL8                                          --------->ANAC58
  <---------ICU4 <-----------GT1  ----------->GT1                   ------>ZmHOX2a(1)
===========================================MADS_MADS               <---------ANAC58
---------ANAC55(2)         --------------->AGL15                   <---------ANAC58    <---------ANAC46
-------->ANAC55(2)  <----------DOF2                    --------->AHL20(2)         <---------REM1(1)
 
tcacataatgtctgtccttttttctttattcctgataatgtaaaatttgttcaacaaaaaaaatacacttccttacgaaatagagatgtaacgtctataa  660400
                                         --------->ANAC58
            --------->TOE2(3)            --------->ANAC58                          <-----------GT1
            --------->TOE1(3)       <---------TOE2(3)                         <---------YAB1
         <-----------GT1            <---------TOE1(3)                       --------->YAB1
      <---------ICU4          <---------YAB1                       --------->KAN4(2)
  ---------->DOF2          <----------DOF2           <-----------GT1   <---------YAB1     <---------ICU4
 
gtctgcaaagaattaccttaatgtatagttcttttcattaaggtaagcattctattctaccatatacaaatattcccattgataattcactaatcttttc  660500
                                                                                                ----
                                                                                                ----
                                                                                                ----
                                                                                         ===========
                                                                                         --------->bZIP60(1)
                                                                                         <---------bZIP60(1)
                        <---------AHL20(1)                                               <---------TGA1a
                    <---------AHL20(2)                                                   <---------bZIP60(2)
                <---------YAB1                                                           --------->O2
             --------->ICU4                                                              --------->TGA1a
             <---------YAB1                                          ==============================bZIP_DOF
           <---------ICU4                                            ---------->DOF2     <---------O2
           --------->YAB1    <---------AHL20(2)                  ---------->DOF2      ----------->HVH21
          --------->ICU4<---------AHL20(2)                       ==================================bZIP_DOF
        --------->YAB1  --------->AHL20(2)           <---------AHL20(2)----------->GT1----------->TGA1
 
tctattagtattcatcatgatgtttattttatttttttgactaaatttgttagtatttttttgagaaaaaaagaaagaaaaaactaagtgtgacgagaca  660600
                                                                                 --------->MYB52(1)
                                                                                <---------ATHB51
                                                                                <---------AHL20(2)
                                                                               --------->AHL20(1)
                                                                              --------->YAB1
                                                                          <---------AHL20(2)
                                                                          --------->AHL20(2)
                                                                       <---------ICU4
                                                                      <---------AHL20(2)
                                                                      --------->AHL20(2)
                                                                    --------->YAB1
  --------->ZAT6                                    --------->AHL20(2)<---------ATHB51
----->ANAC58          ----------->HVH21             <---------AHL20(2)--------->ICU4              --
----->ANAC46        <----------DOF2                --------->AHL20(2)<---------AHL20(1)    ---------
----->ANAC58  --------->ALFIN1      --------->MYB46(3)            --------->AHL20(2)       <--------
===============================bZIP_DOF     ----------->GT1       <---------AHL20(2)      --------->AHL20(2)
 
cgaaaacactagacaaggaggggctttgacgagacccgaacaaacaaatgtgaatttaaaaaaacccattaaaataattaaaaataatggaaatttaaaa  660700
                                                    ------>NtERF2
                                                  --------->ATERF1(1)
                                                 --------->ANAC58                 <---------ICU4
     --------->YAB1                              <---------ATERF1(1)             <---------YAB1
   --------->AHL20(2)          <---------ANAC58  --------->ANAC58<---------HSFB2a(2)
--------->GT1                  <---------ANAC58<-----------RAV1(2)             --------->YAB1      <
>AHL20(2)               --------->TOE2(3)  <-----------HVH21     --------->HSFB2a(2)    ------------
-AHL20(2)           <----------DOF2      *TSS  --------->ATERF1(1)            <-------TEIL    <-----
 
atagaaaataatagtgtctctcgctttccttcatgcgttctctcgcagtcgcaggcgactatcaagtttcagaactcgagattcatcattctctgttcca  660800
                                                                    <---------YAB1
             <---------YAB1          <---------ZAT18             <---------AHL20(2)
            --------->AHL20(2)    --------->LBD16                --------->AHL20(2)
            <---------AHL20(2)    ------>NtERF2                  <---------YAB1
 ------>NtERF2                   <---------ANAC46          --------->AHL20(2)
 --------->LBD16                <---------LBD16          ----------->GT1 <-----------GT1<---------ANAC46
---------LBD16         <---------ARR11(3)  --------->HSFB2a(2)<---------ARR11(3)        <---------ANAC58
--->AtSPL8 --------->YAB1   --------->MYB52(2)     --------->MYB46(3) <---------AHL20(2)<---------ANAC58
----ALFIN1<---------YAB1 --------->TOE2(3) <---------HSFB2a(2)--------->AHL20(1)   <---------ZAT6
 
cttccggcgatgtattataatccctagaccttagttccggcgaactctcgaagaacaaacaagtatatattattattttcttcttagtgtttcgtgctgt  660900
                                                                                              <-----
                                                                                              ------
                         ------>ZmHOX2a(2)                                              --------->ANAC55(2)
                       --------->ARR14(2)                                               <------MYB46(1)
                       <---------ARR14(2)                                               <---------ANAC55(2)
                       --------->ARR11(3)                                              --------->MYB59
                       <---------ARR11(3)                                              --------->MYB111(1)
         <---------TOE1(2)        <-----------GT1          <---------YAB1         <---------YAB1
 --------->ANAC46      <---------AGP1                    <----------DOF2        <-----------------AGL1
--------->LBD16       <---------CCA1(2)          <-----------GT1           <-------GAMYB<------MYB83
 
ttccacgattccttcgttttatcttggatctacagttttacattcttctgtttttcttcactttcattgtttccactgcgttgttctgattaggtattgc  661000
                                     <------ZmHOX2a(1)                                            --
                           --------->At4g35610                                           <----------
                           <---------ZAT2                                  <------ZmHOX2a(1)      <-
                           --------->ZAT2                  --------->At4g35610  ----------->GT1 <---
----ZAT14                 --------->GLK1(2)                <---------ZAT2<---------TOE2(3) <--------
--->ZAT18 <-----------HVH21<---------At4g35610             <---------At4g35610 >>>>>>>>>TBF1>>>>>>>GRF7
 
acaggttttgaaatgtcagtgaaaacgcgaagctgagagaggagaaggaagaaatcgaaggaagctgattcaaatttaggaagaagaaaaaatgtcaggt  661100
           ===============================HOX2a_HOX2a                                              -
           ------>ZmHOX2a(2)                                                                   -----
          ================================HOX2a_HOX2a                       <------ZmHOX2a(2)  -----
          <------ZmHOX2a(2)                                                 =======================HOX2a_HOX2a
          --------->At4g35610                                               ========================
         <-----------ARR10                                                  ========================
         <---------ARR14(2)                                   <---------ANAC58 --------->LBD16 -----
         <---------AGP1                ----------->HVH21      <---------ANAC58 --------------->AtSPL8
         --------->ARR14(2)          <---------ZAT2           <---------ANAC46<-----------RAV1(2)  <
     <---------LBD16                 --------->ZAT2    --------->GLK1(2)   <---------ARR14(2)  <----
------->HSFB2a(2)                    <---------At4g35610--------->At4g35610--------->ARR14(2)  =====
-HVH21<---------ANAC46   --------->At4g35610          --------->DAG2   --------->ANAC55(2)     =====
--------HSFB2a(2)       ------->TEIL --------->At4g35610--------->ZAT2 --------->ANAC46      -------
----TEIL<---------CCA1(2)<---------At4g35610     --------->YAB1        <---------ANAC55(2)  ------>ZmHOX2a(1)
---RAV1(2)<---------At4g35610      <------ZmHOX2a(1) ---------->DOF2 <-----------GT1        ========
 
tcgagagtttcggatctgagtaaattgcatctgaagaaggagctgactcaaatcagaaaagctggccgtgttttacgcgatccaggtactacttcctcct  661200
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AGI:  At2g02480.1   
Description:  STI (STICHEL); ATP binding / DNA binding / DNA-directed DNA polymerase. similar to DNA polymerase-related [Arabidopsis thaliana] (TAIR:AT1G14460.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80768.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46929.1); similar to hypothetical protein OsI_034449 [Oryza sativa (indica cultivar-group)] (GB:EAY80490.1); contains InterPro domain DNA polymerase III clamp loader subunit, C-terminal; (InterPro:IPR008921); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959); contains InterPro domain DNA polymerase III, subunits gamma and tau; (InterPro:IPR012763)
Range:  from: 660742    to: 665634    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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