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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<----------
DOF2
--------->
ANAC58
------>
ZmHOX2a(1)
<---------------
AGL15
--------->
TOE2(3)
--------->
ANAC58
<-----------------
AGL2
<---------
CCA1(2)
<--------
----------------->
AGL3
--------------->
AtSPL3
<----------
DOF2
----------->
GT1
<-----------------
AGL3
--------------->
AtSPL8
<-----------
GT1
--------->
WRKY18(1)
------>
ZAT18
--------->
ANAC58
<----------
DOF2
<---------
TOE1(3)
-------
ZAT18
--------->
ANAC58
<-----------
GT1
<---------
TOE2(3)
-->
DOF2
<-----------
RAV1(2)
------->
TEIL
<-----------
GT1
<----------
DOF2
<-----
cccactatcctttaatgggccaggcatgctatttctgtacaatacaagatggacctgaatgttttaacttttaacttttatctttaaggtcaagttaatt
652200
<---------
AHL20(2)
<---------
YAB1
--------->
YAB1
<<<<<<<<<
MYB98
--------->
TOE2(3)
-----------
<---------------
AGL15
<-----------------
AGL3
------>
MYB83
<---------
ANAC46
--------->
ANAC55(2)
----------->
GT1
-
AHL20(2)
------>
MYB46(1)
--------->
At4g35610
--------->
YAB1
------->
TEIL
----
WOX13(1)
<------
ZmHOX2a(2)
<---------
At4g35610
---------->
ID1
--------->
ICU4
gaaaacaaaaaccaaatttgtggatcaatttggatgcctcagcctacgtataaaaacatgtttttttttcgtaatattaatggaaatgaatatgttaaaa
652300
>>>>>>>>>>
WRKY18
<---------
WRKY18(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
>>>>>>>>>>
WRKY40
<---------
AHL20(1)
>>>>>>>>>>
WRKY62
--------->
AHL20(2)
--------->
WRKY38(1)
--------->
AHL20(1)
--------->
WRKY12
--------->
YAB1
<---------
AHL20(2)
--------->
AHL20(2)
<----------
DOF2
--------->
AHL20(1)
--------->
WRKY45
----------->
GT1
<---------
ALFIN1
<---------
AHL20(2)
<----------
DOF2
<---------
TOE2(3)
--------->
AHL20(2)
--------->
ETT(2)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
AHL20(1)
>
GT1
<-------
TEIL
<---------
ETT(2)
--------->
AHL20(2)
<---------
ARR11(3)
--------->
YAB1
------
aaaaaaaatacatgtttttttcgtcgacacttttaaaaataaaataaaatttaaataaatgtctttgaccaaaataaaaataatgtaaaatttgggagtg
652400
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ANAC55(2)
------------>
CBF
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ANAC46
----------->
GT1
<---------
AHL20(2)
<---------
YAB1
<---------
AHL20(1)
<---------
LBD16
--------->
ICU4
--------->
AHL20(2)
--------->
AHL20(2)
<---------
ZAT2
<---------
ARR14(2)
<---------
AHL20(2)
--------->
AHL20(1)
<
--------->
ZAT2
--------->
ARR14(2)
--------->
ARR11(3)
<---------
AHL20(2)
-
------->
TEIL
<---------
AGP1
<---------
ARR11(3)
--------->
YAB1
--
--->
ALFIN1
--------->
AHL20(2)
------>
ZmHOX2a(2)
--------->
AHL20(2)
<---------
ATHB51
<------
gggaatgtagctcggaaaaaaatagggtatgtagatcggaattaataaatagattttatattattacataaacaataataaaatacacaatgttgtcttt
652500
--------->
YAB1
--------->
AHL20(1)
<-----------
GT1
--------->
AHL20(2)
<---------
TOE2(3)
<---------
ICU4
--------->
AHL20(1)
<---------
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
<---------
DEAR3(2)
<---------
AHL20(2)
------------>
CBF
--------->
AHL20(2)
--------->
AHL20(2)
<------
---------
AHL20(2)
<---------
AHL20(1)
--------->
YAB1
<---------
AHL20(2)
<-------
-------->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
<----------
DOF2
------->
AHL20(2)
--------->
AHL20(2)
--------->
ICU4
----------->
RAV1(1)
*
TSS
<---------
DAG2
<-
----
DOF2
--------->
YAB1
<----------
DOF2
--------->
At4g35610
------>
ZmHOX2a(2)
------
atttaattaatacaaaaataataaaatagacaatgttgtctttattaatattacttctcagccccaaaattaatcttt
gatcggtcccttttgttttatc
652600
<---------
TOE1(3)
<---------
TOE2(3)
<-----------
GT1
-----
GT1
<------------------------
ANAC81
----
GT1
<----------
DOF2
<---------
AHL20(2)
<-----------
GT1
---------
DOF2
<----------
DOF2
<-----------
GT1
--------->
AHL20(2)
<-----------
HVH21
<
---->
ID1
<---------
At4g35610
<----------
DOF2
--------->
LBD16
<----------
DOF2
-
gttttagggtttgtagctcctttctctttttttcttttctcaatttcccccaaattaaaaaaaaactctctctttcagagatttacaaatttcatttctc
652700
--------->
LBD16
<---------
LBD16
------
<---------
ARR11(3)
<---------
ANAC46
--------->
LBD16
---------->
DOF2
<---------
ANAC58
<---------
LBD16
<---------
ARR14(2)
---------->
ID1
<---------
ANAC58
<---------
WRKY18(1)
<
--------->
ARR14(2)
<-----------
GT1
<---------
AtLEC2
<---------
YAB1
<-----
--------->
ANAC46
--------->
ARR11(3)
<---------
ANAC58
<---------
ARR14(2)
<-----
---------
ARR14(2)
--------->
AHL20(1)
<---------
ANAC58
<---------
GLK1(2)
---------
-------->
ARR14(2)
<---------
AHL20(1)
<----------
DOF2
--------->
ARR11(3)
--------->
ZAT14
caaatccgaaaccccaaagtgaatatttttccttctgggtttcttttgtttgcctggaaacatttgtctcagattttgattttgaccggagtactcatat
652800
<------
NtERF2
----------->
RAV1(1)
----------->
HVH21
<---------
ETT(2)
------>
NtERF2
--------->
LBD16
------>
NtERF2
------>
NtERF2
--------->
DEAR3(1)
------
<---------
DEAR3(1)
--------->
ARR11(3)
<-----
--->
ARR14(2)
--------->
LBD16
<---------
ARR11(3)
<-----
---------
LBD16
--------->
RAP2.3(1)
<---------
ZAT6
<-----
----
GLK1(2)
<---------
ATERF1(1)
<-----------
RAV1(1)
<---------
ZAT14
----
ARR14(2)
<---------
DEAR3(1)
<-----------
GT1
--------->
TOE2(1)
<-----------
HVH21
>
YAB1
<---------
LBD16
<---------
ANAC46
--------->
TOE1(1)
<----------
DOF2
<-----
tctccggcgatttctccggcgacatcgtttgtgaa
atggagggaattactcatccaatacctcgtactgttgaagaggtctttagcgacttcagaggtcg
652900
<---------
ARR14(2)
--------->
ANAC55(2)
<---------
ANAC55(2)
--------->
ZAT2
--------->
YAB1
<---------
ZAT2
<---------
YAB1
--->
ETT(2)
--------->
YAB1
----
DEAR3(1)
--------->
GLK1(2)
<-------
----
WRKY12
---------->
DOF2
<---------
YAB1
<---------
ANAC58
--------->
ARR11(3)
----
ETT(2)
<---------
YAB1
--------->
MYB52(1)
<---------
GLK1(2)
<---------
ANAC58
--------->
ARR14(2)
<-
----
WRKY38(1)
--------->
ZAT6
<---------
AtMYB61
<---------
TGA1a
--------->
ATHB12
<---------
acgagctggtcttattaaagctctcactaatg
gtcagttttggtctgattcttgtttctcacttgcgaatcagaatgataagtatctacagagttacgat
653000
--------->
GLK1(2)
<---------
AHL20(2)
<---------
GLK1(2)
<----------
DOF2
<----------
DOF2
<---------
TOE2(3)
---------->
ID1
--------->
ARR11(3)
<-----------
GT1
--
YAB1
<---------
ARR11(3)
----------->
HVH21
----------
RAV1(1)
---------->
DOF2
<---------
AHL20(2)
--------->
CCA1(2)
<---------
ANAC46
--
GT1
----------->
GT1
<---------
DAG2
<----------
DOF2
<---------
ARR14(2)
tttgtggcatttgggtttttcatttgttaaaaaagaagaactttttttattttgggtttcttttgtgagatttgacgattctgggttttgtgttttgttt
653100
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AGI:
At2g02470.1
Description:
PHD finger family protein. similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT1G14510.1); similar to PHD5 [Glycine max] (GB:ABI97244.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011)
Range:
from: 652579
to: 654914
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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