Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    ------>NtERF2                                                                                  <---------At4g35610                                                                                 --------->RAP2.6(2)                                                                                 --------->DEAR3(1)                                                                                 --------->RAP2.3(2)                                                                                 --------->RRTF1(3)                                                                                --------->RAP2.3(1)                                                                                --------->ATERF1(1)                                                                               <---------RAP2.3(1)                                                                               ------>NtERF2                                                                               <---------ATERF1(1)                                                                              <---------ALFIN1                                                                              <---------ATERF1(2)                                                                              --------->DEAR3(1)                                                                              <---------DEAR3(1)                                                                              --------->RAP2.6(2)                                                                              --------->RAP2.3(2)                                                                              --------->RRTF1(3)                                                                              --------->RRTF1(2)                                                                              --------->RAP2.3(3)                                                                             --------->DEAR4(2)                                                                             --------->ERF1                                                                             --------->ORA47(2)                                                                             --------->RAP2.3(1)                                                                             --------->ATERF1(1)                                                                             --------->RAP2.6(1)                                                                             --------->RRTF1(1)                                                                            ------>NtERF2                                                                            --------->At4g35610                                                                            <---------ATERF1(1)                                                                            --------->LBD16                                                                           --------->ANAC46                                                                        <---------ARR14(2)                                                                        --------->ARR14(2)                                                                 --------->LBD16--------->RRTF1(1)                                                                --------->LBD16--------->ABI4(1)                                                      ------>ZmHOX2a(1) --------->GLK1(2)                                     <---------HSFB2a(2)        --------->ANAC46<------NtERF2                                     --------->HSFB2a(2)       <---------LBD16--------->ATERF1(2)           <<<<<<<<<TBF1         <---------ALFIN1    --------->TOE1(3) <---------GLK1(1)        <<<<<<<<<TBF1         --------->YAB1         --------->TOE2(3)----------->ARR10    <--------- ---ZmHOX2a(1)         <----------DOF2        --------->YAB1   --------->LBD16--------->ANAC46   gagttgattcttcttcttcattcttctttctatcaacacctagaagaagcatactccttaacttccccggagaaaatccgccgccgctactagtaaccta  558400                                                                                      <---------GLK1(1)                                                                                   --------->ANAC58                                                  --------->ATHB12  <---------------AtSPL8                                         <---------YAB1             --------------->AtSPL8 <---------At4g35610                  --------->ICU4           ---------->DOF2     --------->ANAC58 --GT1 <------ZmHOX2a(1) <---------ATHB12--------->ICU4   ---------->DOF2 <----------DOF2--------->YAB1   ttcatcggaggaaacagagtttatcaaatcaaaaacagagatgatgatgaagtgatttgcaaaaggaaagtttgtactttgaagtaagaaatcagaaaat  558500                                                                                   <----------DOF2                                                                           --------->ZAT2                --------->GLK1(1)         --------->ARR14(2)               --------->O2  <---------ARR14(2)                <---------GLK1(1)         <---------ARR14(2)               <---------O2  --------->ARR14(2)          <----------DOF2             ----------------->AGL1               ----------->RAV1(2)         <---------ANAC58     --------->ANAC58                             <---------TGA1a         <---------ANAC58     --------->ANAC58                             ===================bZIP_DOF   --------->GLK1(2)--------->TOE2(3) <-----------------AG                 ===================bZIP_DOF   --------->ARR14(2)         --------->ANAC46    <---------DOF5.7(2)      --------->TGA1a <-------TEIL   <---------ARR14(2)       <-----------GT1      <---------WRKY12          <---------ZAT2<---------GLK1(2)   tgacaaatctggcttttgatatccctaattttacgcaaaacccagtttcggtaaacgtgaaaccgaagcattttctcacctgggtctttccgattcgttc  558600                                       <---------HSFB2a(2)                                    -------                                       --------->HSFB2a(2)                                 --------->YAB1                        --------->ARR11(3)                                                <---------AHL20(2)                        --------->GLK1(2)--------->HSFB2a(2)         --------->AtLEC2     <---------YAB1                        <-----------ARR10<---------HSFB2a(2)---------->DOF2              --------->AHL20(2)               --------->GLK1(2)<---------DAG2          ------>ZmHOX2a(1)                <---------AHL20(1)              <---------GLK1(2) <----------DOF2         --------->LBD16                  --------->AHL20(1)        ---------->DOF2 <---------ARR11(3)          --------->ARR11(3)              --------->AHL20(2)   gtaatccatcgaaagagaatctcaaaaatcttcacttttttctcgagaaccaaaaatcctgaaaaagagtgatgcaaaatgtgtaagaaaatataatagt  558700                                                                                          --------->ZAT14                   --------->YAB1                            --------->YAB1               <---------ZAT14                  <---------YAB1                             --------->ATHB12         <--------------             <---------ZAT6                            --------->At5g28300     <---------ANAC58           <------MYB46(1)                          --------->ZAT14            <---------ANAC58           <------MYB83                  ---------->DOF2   <---------WOX13(1) <---------HSFC1(2) *TSS       <-----------RAV1(1)         --------->ATHB12 <---------ZAT14           --------->HSFC1(2) <---       <---------MYB46(3)          --------->ATHB51 --------->ZAT18  --------->ARR11(3)   <-------TEIL -->YAB1  <---------AtMYB61 --------->At4g35610 <---------------AtSPL8<---------ZAT2 ---------->DOF2   agtagtagattgttggtgttatcagaactcagaagcattatttgaaaggaagagtacagtgaatgataagagagcttggaagcttgtgaaagtacagaga  558800                                    <---------GLK1(2)    <------------------------ANAC81                                   <---------HSFC1(2) <----------DOF2                      <---------bZIP60(1)                          <----------DOF2        <----------DOF2                           --------->bZIP60(1)                      <----------DOF2           <------------------------ANAC81         ----------->HVH21              <----------DOF2   ---------->DOF2<------------------------ANAC81        --------->ZAT2- -AtSPL8   <------------------------ANAC81  <----------DOF2                           --------->At4g35610 ------WOX13(1)   <----------DOF2  --------->HSFC1(2) <XXXXXXXXXXXXXXXXXXXXXMIR855    <---------At4g35610   ttgatacacactgtgtctttctttctttctttctcaaagcttctctcttttcttttcttttttttggttttttttttttttggtcttaagctgacatcaa  558900                                                       <---------------AGL15                                                       --------------->AGL15                                                      ----------------->AGL3                   ------                                                      ----------------->AGL2             --------->YAB1                                             <-----------GT1                             <---------ICU4                                  --------->ANAC58    ----------------->AGL1           --------->GLK1(2)                             <---------TOE2(3)    --------->At4g35610                  --------->ARR11(3)                         <----------DOF2   <---------REM1(1)                          --------->YAB1           <---------At5g28300    --------->ANAC58<---------At4g35610   --------->MYB52(1)   <------- -------->MYB52(1)<---------REM1(1)     <-----------RAV1(1) ---------->DOF2          <---------ATHB12   aataagggacattcacagtgatggagcctttaagttaagcaactgttgtaccatctgccaaaaaaagaagaagttaagggacattcaataatcttgatct  559000                                              --------->YAB1              <---------ANAC55(2)            <---------YAB1        --------->ARR11(3)             <---------MYB46(3) <---------ANAC58                   <-------        <---------ARR11(3)         <-------TEIL           <---------ANAC58                 --------->ZAT6 >ZmHOX2a(2)  --------->YAB1     <---------ARR14(2)     <------ZmHOX2a(1)       <-----------GT1  ---- --ARR11(3)   --------->ANAC55(2)--------->ARR14(2) --------->TOE1(2)   ----------->GT1  --------->YAB1   atagttcataaatcttacataattcttcacatccaaattcgttgttgattataacgcaggacttgctatttgaatcgaaattttacccaaataatactat  559100                                                                                             <-------                                                                                       --------->TOE2(3)                                                                                     <---------ARR11(3)                                                                                     <-----------ARR10                                                                                     --------->ARR11(3)                   --------------->AGL15                                          --------->AHL20(2)                   <---------------AGL15                                     --------->AHL20(1)                   ==================================================================================           <-----------HVH21                      <---------WRKY18(1)<---------AHL20(2)--------->TOE1(3)          <------MYB83                       --------->ICU4         --------->AHL20(2) --------->YAB1          <------MYB46(1)              ---------->ID1          ----------->GT1    <---------AHL20(2)    <---------AHL20(2)                <-------GAMYB           --------->DAG2 <---------ARR11(3) --YAB1  --------->MYB59             <---------MYB46(3)      ---------->DOF2 --------->AHL20(2) ------->GT1     --------->ZAT14     --------->MYB52(2) --------->LBD16      <---------AHL20(1)   agttatattatttggtcagttctctatatagactagagtttgttgtaattcttgaccccccaaaaaagtattaattcaaaatattaaaatcttaactttt  559200                                        <---------AHL20(2)                                        --------->AHL20(2)                                       <---                                       --------->AHL20(2)                              <-----------GT1                                       <---------AHL20(1)                           <---------YAB1<--                                 --------->ANAC55(2)                               --------->AHL20(1)                                 <---------ANAC55(2)                              <---------AHL20(2)                               <-----------GT1                                    --------->AHL20(2)                               --------->AHL20(2)                                --------->AHL20(2)                               <---------AHL20(2)                                <---------AHL20(1)                           --------->AHL20(2)                                    <---------AHL20(2)                           <---------AHL20(2)         <----------DOF2 <---------------AtSPL3     ----  --------->LBD16   <---------YAB1 <---------AHL20(2)<---------ANAC58 <---------------AtSPL8     ---- ---DOF2         --------------->AGL15 <---------AHL20(2) <---------ZAT18     --------->AHL20(2) <--- ================================MADS_MADS           <---------ANAC58 --------------->AtSPL8    -----   gacccccaaaaaaacacatcttattttagttaattacttaatttaattctgttttgcttttgcacttcttaatttgtacttaaattattttacaacaaat  559300  Previous    Next  AGI:  At2g02170.1    Description:  remorin family protein. similar to remorin family protein [Arabidopsis thaliana] (TAIR:AT1G30320.1); similar to hypothetical protein OsI_005438 [Oryza sativa (indica cultivar-group)] (GB:EAY84205.1); contains InterPro domain Remorin, C-terminal region (InterPro:IPR005516) Range:  from: 556492    to: 558797    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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