Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ANAC58                 <--                                                          ---------->DOF2                     <------                                                        <---------YAB1                <---------ARR11(3)                                                     <---------YAB1                   --------->ARR11(3)       <-------TEIL          <-----------GT1     --------->AHL20(1)            --------------->AtSPL3      --------->CCA1(2)    <---------AHL20(2)    <---------AHL20(1)         --------->ALFIN1 <-------     --------->ARR14(2)<---------------AGL15     <---------AHL20(2)        <-------MYC3     <--------     <---------ARR14(2)--------------->AGL15     --------->ARR11(3)        ------->MYC3 ------>ZmHOX2a(2) >ZmHOX2a(1)     --------->ATHB51              <---------AHL20(1)--------->ANAC58<---------SPL7 <----   atttgcagatacaatacaactattgctattttaagcctctaacctgcataatattttgatgaaaggcaagccttacatgtggacgtatgatctcatatat  431900                                                   --------->AHL20(2)                                                   --------->AHL20(1) -------AHL20(2)                                   <---------AHL20(2) ---AHL20(2)                                  --------->AHL20(2) --AHL20(1)                                --------->YAB1                               <---------TOE2(3) -CCA1(2)  <---------MYB46(3)        --------->TOE2(3)                                  <---------TOE1(3) -----AHL20(2)                     --------->GLK1(2)                      --------->AHL20(2)<-------TEIL   ttttttttttcatttgttagaagaaactcatgtagataatctcaaacataaaataaaatgtttcaaaaaaaaaaaaaaaaatagtttgtgaaggttcaag  432000                                      --------->ANAC58                            --------->CCA1(2)                           --------->ARR11(3)                           <---------ARR11(3)                           --------->ARR14(2)                           <---------ARR14(2)                           --------->ARR11(1)                         --------->ANAC58                         ----------->ARR10                   --------->YAB1<---------PCF2  <-------TEIL                            <---------AHL20(2)                  <---------ATHB12    --------->ANAC46                      ---------->DOF2                --------->WOX13(1)    --------->ANAC58--------->GLK1(1) <----------ID1   --------->AHL20(2)           <-------TEIL  --------->ANAC58    --------->AHL20(2)     ---------->DOF2  --------->AHL20(2)   aaaatcagacaaattcatcaatcagacaagatatgggtccaagccaaaaaattcatatatccaacatgctcaaagaaacaaagtctaaaaaataaataca  432100                     --------->ARR11(3)                                                             -              --------->ARR11(3)                 <---------ALFIN1                                  --              <---------ARR11(3)              <-----------GT1                                      <-              --------->GLK1(2)         <---------AHL20(2)                                         --        <----------ID1             --------->TOE2(3)<---------DAG2                                 --        ----------->GT1   --------->REM1(1)   --------->ANAC46                       ------->TEIL  --      ---------->DOF2<---------ARR11(3) --------->AHL20(2)                  --------->REM1(1)    <---   aaataacaaaaagaaaaatctaaaatctacatctaaatctaaataaatacaccaccttctctctctctctctctagctacacgagtgtatgtatacattt  432200     <---------ICU4     <------------ATHB5     --------->ATHB12     <--------ATHB1     --------->YAB1    <---------ATHB51    <---------ATHB12    --------->ICU4 ----------->CBF--------->ZAT18 ------->ANAC46 ------------>CBF --------ANAC55(2)                    ------------>CBF ------->ANAC58 <---------ZAT14      --------->ANAC58 ------->ANAC58 --------->ZAT14      --------->ANAC46 ------->ANAC55(2)       <----------DOF2            ---------->DOF2       *TSS --------GT1    <---------ZAT18      --------->ANAC58        <---------MYB52(1)                <xxxxx   tacgcaatgatggcatagtgcaatgagctttataagtagaagcaatatagacatcaaagaccccttatttgctctcaactctcaagtgtatgagagagaa  432300                            --------->ANAC46                                              --------->TOE2(2)                       --------->AHL20(1)                                  <----------DOF2--------->TOE1(2)                       --------->ARR11(3)                             ---------->DOF2    --------->YAB1                       <---------ARR11(3)                          <---------AHL20(2)   <---------YAB1                      --------->AHL20(2)                           --------->AHL20(2)   <---------TOE2(3)              ----------->GT1                               --------->ANAC58     --------->YAB1 xxxxxxxxxxxxxxxsmallRNA(se3)  ---------->DOF2              --------->ANAC58  --------->YAB1   ataggtttttgaagaagagtcaaaatatatacccaaagagagagctagagagagagagactcaagaaaattaaaaagctttcatcatattaacataagag  432400                                                --------->TOE1(3)                                               ----------->GT1                                         <---------HSFB2a(2)    <-----------GT1                                    <-----------RAV1(1)    <----------DOF2              <-----------GT1                                    --------->MYB52(2)  <---------ARR11(3)         <----------DOF2                            ---------->DOF2 ---------->DOF2<---------DAG2   --------->ARR11(3)                   --------->DAG2   <---------MYB46(3)  --------->ARR11(3)  <---------ARR11(3) <----------DOF2  ---------->DOF2 <----------DOF2   ---------->DOF2        <---------CCA1(2)     ----   aaactttgaagagcctaagaaaaagttttgaaaagcctttgttgcagaaagcttaaaagaactttttctctccccctatatctctctttatcacccttcc  432500               --------->ARR14(2)               ------->TEIL          <---------At4g35610                                                                   -----          --------->At4g35610                                                         --------->WOX13(1)       ---------->DOF2                     <---------AHL20(2)                       <---------ATHB12  <----------DOF2                   <----------DOF2         <----------DOF2  --------->YAB1 <-------- -->ZmHOX2a(1)<---------GLK1(2)   <------------------------ANAC81         <----------DOF2   ---------   tcttctttgtaaagctgaatctcccactatctcttcttctttcatttttttttttttttggtctttgggccttgttctttcatcaaatcaatctctagaa  432600                                 --------->DAG2                             --------->ANAC58                                                      <-                             --------->ANAC58                --------->ANAC55(2)                 <---          --------->DAG2 --------->ARR11(3)                  <---------ANAC55(2)                 <---         ---------->DOF2 <---------ARR11(3)               <------ZmHOX2a(2)                      <--- ---->GLK1(2)        ---------->DOF2   <---------ZAT6    --------->ARR11(3)                <-------MYC3 -HSFB2a(2)      ---------->DOF2---------->DOF2          --------->AGP1                    ------->MYC3 >HSFB2a(2)----------->GT1<------ZmHOX2a(2) <---------WOX13(1)            ----------->RAV1(1)  <-----   tccaaatacaataaagtcaaaaagaaagatcaagaaaagtagagtaattgatgagaacagatcaagtgatgttgtccaacaagaacacaaacacatgttg  432700                                  ------>ZmHOX2a(1)                                       --------->ARR11(3)          <<<<<<<<<TBF1 ------>ZmHOX2a(1)                                                 <---------ARR11(3)       <<<<<<<<<TBF1  ------>ZmHOX2a(2)                  --------->AtMYB61                <---------ARR14(2)     <------------------------ANAC81                   ----------->RAV1(1)         ---------->DOF2 --------AtMYB61      ==============HOX2a_HOX2a       --------->AtMYB61          <------ZmHOX2a(1) ------ANAC58         ===================HOX2a_HOX2a  <---------ALFIN1          <----------ID1 ------ANAC46   <---------At4g35610                   --------->ANAC46     --------->At4g35610 ------ANAC58   ----------->RAV1(2)                  --------->MYB46(3)    <---------At4g35610 ----ANAC46  <<<<<<<<<TBF1   ------>ZmHOX2a(1)   <-----------HVH21       --------->YAB1   --------->ARR14(2)   tgtggtttcttcttcttcttctgatcctttcctctcctcttcagaaaatggggtcaccaccacaaacacatccactcagaagaggaaaagaagacctgca  432800  Previous    Next  AGI:  At2g01940.1    Description:  ATIDD15/SGR5 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 15, SHOOT GRAVITROPISM 5); nucleic acid binding / transcription factor/ zinc ion binding. similar to ATIDD14 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 14), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G68130.1); similar to unknown [Populus trichocarpa] (GB:ABK95103.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 432274    to: 435076    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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