Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 ------>NtERF2                                              --------->DEAR3(1)                                              <---------ALFIN1                                             <------NtERF2                                             <---------ABI4(2)                                             --------->ATERF1(1)                                             ----------->HVH21                                            <-----------HVH21                                            <---------ATERF1(1)                                            ------>NtERF2          <---------ANAC58                 --------->ANAC46          <---------ANAC46        --------->ZAT2                                                    -         ---------->ID1           <---------At4g35610                                          <-----  <---------ANAC46 --------->ANAC46        --------->ANAC58                                   ------- ----->ARR14(2)   <---------TOE1(3)        --------->ANAC58                <---------REM1(2)--------- ------ARR14(2)   <---------TOE2(3)       ------->GAMYB         ----------->ARR10          <---------LBD16 --ZmHOX2a(1)    <-----------GT1  --------->At4g35610          <------NtERF2  <---------RAP2.6(2)---- >DEAR3(1)<---------ANAC58        <---------ZAT2<------NtERF2<---------ANAC46--------->RAP2.6(3) ----   aacgtcgtgttgtcgtatttaacgaaacagccttcgagctgcaacgcgccaccgcttgccatggcgcagagactccctagacggcttactgctcgcgcga  292200                                                                                       <---------DEAR3(1)                                                                                     <-------GAMYB                                                                                 <---------ARR14(2)                                                                                 --------->GLK1(2)                                                                                <---------ARR14(2)                                                                               --------->HSFB2a(1)                                                                               <---------HSFB2a(1)                                                                               --------->HSFC1(2)                                                                               <----------TaMYB80                                                                             <------NtERF2                                                                            --------->LBD16                                                                           --------->DEAR3(1)                                         <---------ALFIN1                 --------->ATERF1(1)                                       ------>NtERF2                      <------NtERF2<---------MYB46(3)                                       ----------->RAV1(1)                <---------LBD16                                      ----------->HVH21                  <---------RAP2.3(1)       <-                                <------ZmHOX2a(2)                        ------>NtERF2<---------MYB52(1)                          =============HOX2a_HOX2a                      <---------DEAR3(1) <---------MYB46(3)                          <------ZmHOX2a(1)                             <---------ETT(2)<------MYB46(1)                       <------NtERF2  --------->ANAC46                  --------->ETT(2)<------MYB83 ------>TEIL          --------->LBD16--------->LBD16                  <-----------HVH21<---------AtMYB61 ----ATERF1(1)      <---------LBD16 --------->DEAR3(1)               <-----------RAV1(1)<---------MYB46(3) ---->HVH21        <---------ZAT2   --------->ANAC46                <------------AtMYB77--------->MYB52(2) >ANAC46           --------->ZAT2 <---------At5g28300             --------->ARR14(2)<---------ANAC58 ----->ANAC58   --------->LBD16--------->ARR11(3)                 <---------ARR14(2)<---------ANAC46 ----->ANAC58 <---------LBD16  <---------ARR11(3)                <------ZmHOX2a(1)  <---------ANAC58   cgcatcttgcacaatctcccgagccggaggagagatcaccgcgacactggtacaaaccgtagacggaggaactgtcgccggagattccgttggtggtgaa  292300                                 <---------TOE1(1)                               --------->MYB52(1)                           --------->LBD16                              ------->GAMYB                                <---------HSFB2a(2)                              --------->TOE1(2)                   --------->DAG2                             --------->MYB46(3)                  --------->SPL7                             <---------MYB52(2)                  ---------->DOF2     <----------DOF2<                           --------->MYB52(1)                 --------->ANAC58       <---------DAG2 <                        <---------At4g35610              ----------->HVH21 --------->HSFB2a(2)      <                        --------->At4g35610         <---------TOE2(3)      --------->LBD16          -                   <---------At4g35610              <---------TOE1(3)     <---------LBD16          --                   --------->ZAT2<---------TOE2(1) --------->MYB52(1)   <------ZmHOX2a(2)       -----                   --------->At4g35610             <---------DOF5.7(2) <---------ARR14(2)<---------ANAC58         --------->REM1(2) <---------DOF5.7(2)   --------->DOF5.7(2)   --------->ARR14(2)<---------ANAC58 --------MYB46(3) --------->GLK1(2)            <---------ZAT6 --------->ANAC58---------->DOF2   <----   gttgttgtatgtgtagagagaagctgagctaacgaacgaggtgagtagagagttaacgtttgactcgtaaggcgatcccggaaagtacttttcttgtgag  292400                                                        --------->MYB52(1)                                                       --------->ANAC46                                                       <---------O2                              <------NtERF2            --------->TGA1a                              <-------GAMYB            --------->O2                              ===================================MYC_MYB                              --------->At4g35610      --------->ANAC58  --------->MYB52(1)         <---------MYB46(3)        ----------->HVH21 ------->GAMYB              <---------ANAC46           --------->ANAC58 <---------ALFIN1          <---------LBD16             <---------TGA1a --------->AtMYB61        <---------RAP2.3(1)          =====================bZIP_DOF ---------MYB55(2)       <---------RAP2.3(2)      ----------->HVH21 ---------MYB52(2)       <---------DEAR3(1) --------->HSFB2a(2) ---------ABI4(2)       --------->At4g35610 <---------HSFB2a(2)  ---------->DOF2 -------->MYB46(3)      <---------At4g35610 --------->LBD16 <------NtERF2 ------>P   ---------->DOF2<------NtERF2   <---------ANAC46------>NtERF2 ---->At4g35610    --------->ETT(2)   --------->HSFB2a(1) <---------DEAR3(1) -----At4g35610    <---------ETT(2)   <---------HSFB2a(1)--------->RAP2.6(3)          <---------ZAT18   caaccaccgtagataaaagtatcgacagcggcggatgaaaacgttccgagaagtgacacgacggcgataaagagaactgtttttgtagcgaacatgactt  292500                                                                                           <---------                                              ---------->DOF2                            *TSS                                           <---------HSFC1(1)                    <------MYB46(1)                                           --------->HSFB2a(2)                <---------ANAC58           <----------DOF2                 <---------HSFB2a(2)                <---------ANAC58       <---------ANAC58               --------->ATHB12                      <---------YAB1 <---------DAG2       <---------ANAC58              <---------YAB1                <----------DOF2      <-----------GT1  --------->ATHB12            <-----------RAV1(1)    --------->YAB1<---------DAG2<------MYB83   tcgacgattgcttctttttgttctctctctctctgtggtatgattcgagaaagaatgagaacgtcgcgacttttttttatgcttggtgtttaactttttt  292600                 <-------GAMYB                <---------ANAC58                ----------->GT1                <---------ANAC58               <-------TEIL            <------MYB46(1)            <------MYB83           <---------MYB46(3)          <---------WOX13(1)         <------------CBF        <---------ICU4        -------->HAHB4        <--------ATHB1        --------->ATHB12       --------->ICU4                            <------------CBF       <---------ATHB12                        <---------AHL20(2)       <---------YAB1                     <---------YAB1   <-----------GT1                        <--     --------->YAB1             <---------YAB1 <---------AHL20(1)                      <------MYB46(1)    <---------AHL20(2)       <---------YAB1    --------->AHL20(1)                      <------MYB83   <---------AHL20(2)        --------->ICU4   --------->AHL20(2)                      --------->MYB46(2) -DOF2<---------TOE2(3)   <---------YAB1<----------DOF2  <---------AHL20(2)           --------->MYB59   ttttttttaatgattggtgcgttactatatgattatgaaacactttgattatattgtatttttatcatctgtttatcagttatatggtttggtaatcgat  292700                                                                                       xxxxxxxxxxxxxx                                                                                       <---------ANAC58                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       <---------ANAC58                                                                                      <xxxxxxxxxxxxxx                                                                                     <---------ATHB12                                                                                     <---------YAB1                                                                                  xxxxxxxxxxxxxxxxxxx                                                                          <---------ICU4                                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                       --------->bZIP60(2)<----------                                                                       <xxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                  ----------->HVH21--------->YAB1                                                                  xxxxxxxxxxxxxxxxx>smallRNA(fl3)                       <------MYB46(1)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       <------MYB83                            xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                      --------->MYB59                         <---------YAB1   --------->ZAT6                  --------->AHL20(2)                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                  <---------AHL20(2)                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 <---------AHL20(2)                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                <---------------AGL15                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)               ======================================================================================               <-----------------AG                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              --------->AHL20(2)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<xxxxxxxxxxx              <---------AHL20(2)        xxxxxxxxxxxxxxxx>smallRNA(i)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)           <---------ICU4              ---------->DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  -------          --------->ICU4     --------->YAB1         <----------DOF2  xxxxxxxxxxxxxxxx>smallRNA(s) ---------GT1<---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <xxxxxxxxxxxxxxxxsmallRNA(fl3)   atactatatgtcaaaattatttatttggtaatcatatatatgaaagttggctaactttcttcatatgagtgacacatcatcacactaatgagtgtcacat  292800              <---------YAB1              <---------AHL20(2)            =========================================================================================            --------------->AGL15            <---------------AGL15           <---------YAB1           <---------TOE2(3)         <---------AHL20(2)         --------->AHL20(2)        --------->AHL20(2)    ------>ZmHOX2a(1)   --------->TOE2(3) <---------YAB1  <---------YAB1 xxxxxxxxx>smallRNA(fl3) xxxxxxxx>smallRNA(si3) xxxxxx>smallRNA(si3)         --------->AHL20(2) xxxxxxxx>smallRNA(le3)       <---------AHL20(2)           <---------TOE2(3) xxxxxxxsmallRNA(fl3)    --------->AHL20(2)                <---------YAB1 xxxx>smallRNA(le3)      --------->AHL20(1)               <-----------GT1           --------->TOE2(3) -HVH21 <---------AHL20(2) --------->YAB1        <---------AHL20(2)                 --------->YAB1  - ===========================MADS_MADS           --------->AHL20(2)            --------->TOE2(3)     - xxxxxxxxxsmallRNA(se3) --------->YAB1      <---------AHL20(2)               --------->YAB1  <------- -->ANAC55(2)<---------AHL20(1)            --------->AHL20(2)           <---------ATHB12<---------YAB1   gttatcctaaattaatattattagaaaaataataaaacttggtgataaaatttaaaagtttaacattgcattgaatcattcattaatcttatttttaaca  292900       --------------->AGL15       <---------------AGL15              <---------AHL20(2) --------->ARR11(3)                 --------->YAB1 <-----------ARR10                  --------->TOE2(3)              <----------DOF2 --------->ARR14(2)                ----------->GT1                 <---------DAG2         <---------AHL20(2) <---------ARR11(3)          <---------AHL20(2)            <XXXXXXXXXXXXXXXXXXXXMIR1886.1--------->AHL20(2) ======================MADS_MADS   <---------YAB1         <---------YAB1                 <---------AHL20(2) -------->CCA1(1)    --------->AHL20(2)   --------->AHL20(1)    <-----------GT1      <---------AHL20(2) -------->RVE1(1)  --------->AHL20(2)     <---------AHL20(1)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----GT1    ---------->DOF2  --------->AHL20(2)          <-----------GT1      <-----------GT1   aaatatcttcacttaaaagaaaaaaatataaaaaattatgttaatatatcaaatactattttcattttacttttcttattttgctattttttttaatagt  293000                                                           --------->AHL20(2)                                                     --------->TOE2(3)                                                     <---------DAG2                                                <---------MYB59                                               --------->ANAC55(2)                                               <---------ANAC55(2)                                           --------->TOE1(1)                                        ----------->RAV1(2)<---------AHL20(2)              --------->YAB1                                       -------->P <-----------GT1                          <---------ICU4                     <----------DOF2<---------MYB52(2)<----------DOF2       --------->TOE2(3) <------           <---------MYB46(3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <-----------GT1 <---------YAB1          --------->ICU4        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    --------->YAB1     --------->ICU4        <---------ICU4         xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)----------->GT1       <---------YAB1   cagtatttgataatggttagaaacttttgggtattgcaacttacctggtacttaaccttttttaatttagtaattttaacttaatttttcttattattac  293100  Previous    Next  AGI:  At2g01660.1    Description:  33 kDa secretory protein-related. Identical to Cysteine-rich repeat secretory protein 12 precursor (CRRSP12) [Arabidopsis Thaliana] (GB:Q9ZU94;GB:Q0WTE1;GB:Q8LDG0;GB:Q8W466); similar to receptor-like protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G37660.1); similar to receptor-like protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G37660.2); similar to unknown [Populus trichocarpa] (GB:ABK95645.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902) Range:  from: 290602    to: 292589    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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