Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                               --------->ANAC58                                                     <                               --------->ANAC58                                                     =                           ------->GAMYB                                                           <-                           --------->AtMYB61                                                       --                          <---------MYB55(2)                  --------------->AGL15                <-                          --------->MYB46(3)                 ----------------->AGL3                <-                         ------>MYB83                 --------->GLK1(2)<------ZmHOX2a(1)           <-                <------ZmHOX2a(2)                     --------->ARR14(2)                           --               --------->ARR14(2)        --------->ZAT2    <---------ARR14(2)                      <-               <-----------ARR10         <---------ZAT2    --------->AGP1                          --               <---------ARR14(2)      <-----------RAV1(2) --------->ARR14(2)                      --              --------->At4g35610   -------->P        <---------ARR14(2)                         ----         --------->DAG2  ------>MYB46(1) --------->At4g35610==================HOX2a_HOX2a   <-------TEIL        ---------->DOF2--------->DEAR3(1)<---------At4g35610<------ZmHOX2a(2)        --------->AtLEC2  <-----------------AGL1 -------->P ------>MYB46(1)--------->ANAC55(2) ============================== ---->MYB46(3)<---------At4g35610   ------>MYB83   <---------ANAC55(2) ==============================   agccatccgataaggcagatcagagccaaccacaagcctacccagctgaaaataagtatccgatctagttataggaaatacaaaaccttgcaaatgcata  214100        ------>ZmHOX2a(1)   <---------At4g35610   --------->At4g35610 ==============HOX2a_HOX2a ------>ZmHOX2a(2) -------->ARR14(1) -------->CCA1(2) ------ZmHOX2a(2) ==============HOX2a_HOX2a --------ARR14(3) ------->AGP1 ----------ARR10                                                                                  <-- --------ARR11(3)                                                                               ----- --------ARR14(2)                                                                        --------->ANAC58 ------->ARR14(2)                                                                        --------->ANAC58 --------AGP1                                                                            --------->ANAC55(1) ------->ARR11(3)                                                                        --------->ANAC46 ------->ARR14(3)                                                                      <---------ALFIN1 ------->ARR10  --------->YAB1               ------>ZmHOX2a(1)--------->LBD16         <---------REM1(2) ======HOX2a_HOX2a                     <---------DAG2   <---------MYB46(3)         <------ZmHOX2a(2) =======HOX2a_HOX2a                 <-----------GT1    <--------P               <XXXXXXXXXXXXXXXXXXXXMIR863-5P   agatctgctcctatacactcatataagaacagaatataaaacctttcctacttacaggttgttccgagagagaattggtgtttagatcaacacggcatat  214200                                          <---------SPL7                                          --------->LBD16                                         --------->DEAR3(1)                                        <---------LBD16                                       --------->LBD16        <---------HSFB2a(2)                                       ------>NtERF2          --------->LBD16                                      --------->DEAR3(1)      --------->HSFB2a(2)                                     --------->ATERF1(1)     <---------ANAC46                                    ------>NtERF2            <---------LBD16                                    <---------ATERF1(1)     <---------LBD16                                   --------->DEAR3(1)     <---------ARR14(2)                                   <---------ALFIN1       --------->ARR14(2)                                  --------->ATERF1(1)    --------->ZAT2                                 <---------ATERF1(1)     <---------At4g35610                                 ------>NtERF2           --------->At4g35610 >>>>>>>>>TBF1                                --------->ANAC46--------->MYB52(1)        >>>>>>>>>TBF1     <-------- -------AHL20(2)        ---------->ID1--------->ANAC46   <---------ZAT2>>>>>>>>>TBF1        --------- ---->AHL20(2)--------->GLK1(2) --------->DEAR3(1)      ------->TEIL>>>>>>>>>TBF1        --------->YAB1   taatatgacattagagattccacttcgtccctctccgcctccgccggacaaaacgatgcagctccgggaagaagaagaagaagaagacgactcatcatca  214300                                                                <---------ANAC46                                                                ----------->GT1                                                              ------>NtERF2                                                              <---------ATERF1(1)                                                              <---------RAP2.6(1)                                                              <---------ERF1                                                              <---------ORA47(2)                                                              <---------RAP2.3(1)                                                             <---------DEAR3(1)                                                             <---------RAP2.3(2)                                                            <---------ABI4(1)                                                            <---------At4g35610                                                            --------->ATERF1(1)                                                            <------NtERF2                                                            --------->At4g35610                                                           <---------RAP2.3(1)                                                --------->LBD16--------->RAP2.3(1)                    <---------ICU4             --------->HSFB2a(2)                    --------->YAB1             <---------HSFB2a(2)         --------->ZAT14                   --------->ICU4              --------->ANAC46<------NtERF2                ------>ZmHOX2a(2)           --------->AtMYB61--------->DEAR3(1)                <-------TEIL      ----------->HVH21        <---------ATERF1(1)               <------ZmHOX2a(2) ------>ZmHOX2a(2)         <---------ORA47(2)                       <              --------->ARR14(2)<---------At4g35610       <---------RAP2.3(3)     --------->SPL7  <--              <---------ARR14(2)--------->At4g35610       <---------DEAR3(1)<---------ALFIN1   ------            --------->LBD16    <---------AGP1 <---------LBD16<---------RAP2.3(3) <---------MYB52(1)<-     --------->GLK1(1)         --------->ARR14(2)  --------->ARR14(2)      <-------TEIL     ---------     <---------GLK1(1)<---------YAB1      -------->P      <---------DREB2C(2)   --------->At5g28300<- -ICU4    <---------LBD16      <---------ARR14(2)  <---------ARR14(2)      <---------ZAT14  <-------- >YAB1  <-----------GT1 --------->ARR11(3)------->TEIL  <-----------HVH21  --------->SPL7  <---------   tcttcagatttctccggatccattatgattttggatctgacatctacctccggaatccagtcggcggcgtaaatcggtacaccgtaagtctgcatattcg  214400                            --------->DEAR3(1) -------GAMYB            --------->ANAC58 -------DEAR3(1)         --------->ANAC58 ----->HVH21    --------->ZAT14     --------->LBD16 --------DEAR3(2)     <---------GLK1(2) >ARR14(2)      <---------ZAT14    <---------ANAC58                      <---------GLK1(2) --------MYB46(3)   <---------YAB1 <---------ANAC46                 <---------ALFIN1 -ARR14(2)    --------->ZAT14      <---------ANAC58--------->At4g35610 *TSS ----------->GT1 -TaMYB80     <---------ZAT14    ------>ZmHOX2a(1) <---------At4g35610 <---------ATHB12            --   acggttgattcgtctctgtactctgattcgccatcctccgtgtctgtctctcgagctcaatgccaagtccccactgattcgtaaaaatactaaatacaaa  214500                                                                                 --------->DAG2                                                                                ---------->DOF2    <-     <---------AHL20(2)                              <---------AHL20(1)         <---------ZAT14  ----     <---------YAB1                                 --------->YAB1              --------->ZAT14<-----    --------->TOE2(3)                            --------->YAB1            <---------LBD16     <-----  <---------AHL20(1)                            <---------ATHB12        <---------GLK1(1)    <-------  --------->AHL20(1)                  <---------AHL20(2)  <---------AHL20(2) --------->LBD16<-------GAMYB ------->AHL20(2)   ---------->DOF2 <-----------TBP<---------YAB1       --------->GLK1(1)  <---------MYB46(3)   aaaaaatattaatgggctaacttaaggcccattacagtatttataggcccatcataatatttcatttatcgctgaattccggtaaagtgatagcggttgg  214600                                                                                  <---------AHL20(2)                                                                                <----------DOF2                                                                                ------>ZmHOX2a(1)                                                                              ------>ZmHOX2a(2)                                                                             <------ZmHOX2a(2)                                                                            --------->ARR14(2)     <-                                                                            <---------GLK1(2)  <-----                                                                            <---------ARR11(3) ------        --------->LBD16                                                     <---------ARR14(2) <-----       --------->ANAC46              --------->SPL1(2)                     <---------ARR14(1)  <-----      <---------LBD16               --------->SPL1(1)                   <---------LBD16        ------    <---------ZAT14                <------NtERF2                       --------->MYB52(1)    <-------    --------->ZAT14                <---------SPL7                    <---------ARR14(2)      <-------    <-------TEIL                  <---------DEAR3(2)              --------->ANAC55(2)       --------- --------->LBD16              <---------DEAR3(1)             <---------------AtSPL3        <---------YAB1 --------LBD16           <---------------AtSPL3              <---------------AtSPL8     <---------YAB1 ----->TCP16(1)   <---------ANAC46<---------MYB46(3)      ---------->DOF2 --------->LBD16--------->YAB1 -MYB83--------->ANAC55(2)   --------->SPL7 --------->WRKY18(1)   <---------ANAC46--------->AHL20(2) -MYB46(1)      --------->CCA1(2)<---------DEAR3(1)  <------NtERF2<---------ANAC55(2) <---------ICU4 -P<-----------HVH21  ---------->DOF2--------->SPL7<---------DEAR3(1)--------->ARR14(2)--------->AHL20(2)   acccggttcacgggatagagacgggaaagagtacggcggtacggaggtcaaactcggcgagaaagagtacgtataccggatcctttaatttttataatat  214700         --------->ANAC46         --------->ANAC58     <-----------GT1    --------->YAB1 --------YAB1                                                                              <------MYB83 ----ICU4--------->ANAC58                                                              <---------ANAC46 --->ARR11(3)                                                                         <---------TOE2(3) ----ARR11(3)                                                              <------MYB46(1)<---------TOE1(2) ----AHL20(1)                                     ----------->GT1          <------MYB83<---------ANAC58 --->AHL20(1)                          --------->ANAC46                   <---------AtMYB61<------MYB46(1) --AHL20(2)                   ------>ZmHOX2a(2)   <---------ANAC46     <-----------RAV1(1)<---------TOE2(2) --AHL20(1)      <---------YAB1        --------->ANAC58                --------->ALFIN1<---------ANAC58 >YAB1 <-----------GT1--------->ATHB12 --------->ANAC58    --------->TOE2(3)    <---------YAB1   tttcatttatcaccccaatactattgatttgatctaaaaacaccctatagttgtgtaaaattcttaaatcgatgtgttggtgatttttgacgtaggtatc  214800                                                                                           <--------ATHB1                --------->GLK1(1)                                                          <---------AHL20(1)                <---------GLK1(1)                                                          --------->AHL20(2)              <------ZmHOX2a(1)                                                            <---------ICU4          <---------TOE1(1)                                                  <---------ANAC58          <---------TOE2(1)                                                  <---------ANAC46      --------->HSFB2a(2)                                                    <---------ANAC58      <---------HSFB2a(2)                                               <------MYB83       <---------AHL20(2)     <---------ANAC58                                                   <------MYB46(1)    --------->YAB1     <---------ANAC58               ----------->GT1              <---------ZAT2           <---------YAB1     <---------ANAC46     <-------TEIL                           --------->At4g35610      --------->ICU4     <---------LBD16  <---------TOE1(2)                          <---------At4g35610    --------->YAB1    <---------LBD16 --------->TOE2(3)         ---------->DOF2<-----------HVH21         --------->ICU4   atctgtttcgggacgaggacatccttggtacattgcacgagtaaaatgcaaaggaagtctctgagtcagctagtgggtttcttggtggaataataatttt  214900                                                                                         ------->GAMYB                                                                                        <------------MYB.PH3(1)                                                                                <----------DOF2                                                     <---------ICU4         ---------->ID1   <-------                                                    <---------YAB1 ------>ZmHOX2a(1)  <-----------GT1               <-------TEIL                       --------->YAB1  --------->TOE2(3)  <---------YAB1 ----------->HVH21                      ----------->GT1         ------>ZmHOX2a(1)  --------->YAB1   tcagtgactcgtttcgatacatgttgttgaaatttgaaagttttgttatttctcatcattttgttcctccttaaatttggcccttttataactgtcttta  215000  Previous    Next  AGI:  At2g01470.1    Description:  STL2P (SEC12P-LIKE PROTEIN); nucleotide binding. Identical to SEC12-like protein 2 (STL2P) [Arabidopsis Thaliana] (GB:Q39221;GB:Q7EP29;GB:Q8VZ72); similar to WD-40 repeat family protein / St12p protein, putative [Arabidopsis thaliana] (TAIR:AT5G50650.1); similar to WD-40 repeat family protein / St12p protein, putative [Arabidopsis thaliana] (TAIR:AT5G50550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42285.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 211969    to: 214471    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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