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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ATHB12
<---------
YAB5
<---------
YAB1
<---------
AHL25(3)
--------->
AHL25(1)
<---------
AHL25(1)
<---------
AHL20(2)
--------->
AHL20(2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
<---------
YAB1
--------->
AtLEC2
--------->
WOX13(2)
------>
MYB83
--------->
YAB1
------>
MYB46(1)
--------->
YAB5
--------->
DOF5.7(1)
------->
GAMYB
<--------
HAHB4
<---------
TOE2(3)
<---------
ICU4
<---------
YAB1
<---------
AHL25(3)
--------->
YAB1
<---------
ZAT18
--------->
AHL20(2)
--------->
YAB5
--------->
ZAT14
--------->
AHL20(2)
<---------
TOE2(3)
<---------
YAB1
<---------
ANAC58
<---------
WOX13(2)
>>>>>>>>>
WRKY18
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<---------
ANAC46
--------->
At5g28300
--------->
GATA12
------>
NtERF2
--------->
MYB46(3)
<---------
ANAC58
----------->
GT1
xxxxxxxxxxxxxxxx>
smallRNA(i)
--------->
YAB1
--------------->
AtSPL8
<---------
WOX13(2)
------>
ZmHOX2a(2)
<------
NtERF2
<-----------
GT1
--
----->
AtMYB61
<---------
TOE2(3)
--------->
DOF5.7(1)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<-
---->
ZAT14
--------->
AHL12(2)
---------->
DOF2
--------->
WRKY12
<---------
DOF5.7(1)
--------->
KAN1
-----
ZAT14
<---------
WOX13(2)
--------->
DOF5.7(1)
<---------
KAN1
------->
GAMYB
--------->
TOE1(3)
-->
ANAC46
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
----------->
HVH21
--------->
MYB46(3)
--------->
TOE2(3)
cactgcgtactataattaatgaatggtaaataaaaaaaggtttgatccattgacgattttgtccgccttaaccatcataaccatccaaaccctaattcta
163600
--------
<-------
MYC3
---------->
DOF2
------->
MYC3
--------->
ALFIN1
--------->
ANAC55(2)
------->
MYC3
--------->
ANAC58
<---------
AtLEC2
<-------
MYC3
--------->
AHL20(2)
--------->
ANAC58
<---------
ANAC46
<---------
O2
--------->
WOX13(2)
--------->
ANAC46
<---------
ANAC58
--------->
O2
<---------
WOX13(2)
--------->
KAN1
<---------
GATA12
<---------
ANAC58
------->
AHL12(1)
----------->
GT1
<---------
RVE1(2)
--------->
GATA12
<---------
ICU4
--------
AHL12(1)
--------->
DOF5.7(1)
----------->
GT1
------->
TEIL
--------->
TOE2(3)
--
aaatttcaacgtggcagaaaagaaggtaattgaataacaaggtgatatactcttgaaataaacatgaatctacaagctatacttaatagttgcatgtgat
163700
<---------
WOX13(2)
--------->
YAB5
<---------
AHL25(3)
--------->
AHL12(1)
<---------
AHL12(1)
<---------
AHL25(1)
<---------
ATHB51
--------->
AHL12(3)
--------->
AHL25(1)
--------->
AHL25(2)
--------->
AHL20(2)
<---------
AHL12(3)
<---------
AHL25(3)
<---------
AHL20(2)
--------->
ICU4
--------->
AHL25(3)
--------->
AHL20(3)
--------->
AHL25(2)
<---------
AHL20(3)
<---------
AHL25(2)
--------->
AHL25(3)
<---------
AHL20(1)
--------->
YAB1
--------->
AHL25(1)
<---------
AHL20(3)
--------->
YAB5
<---------
ICU4
--------->
ATHB12
<---------
YAB1
<---------
YAB5
--------->
ICU4
--------->
YAB1
<---------
ICU4
--------->
ICU4
--------->
WOX13(2)
--------->
ANAC58
--------->
AHL12(2)
--------->
AHL20(2)
--------->
AHL20(3)
<---------
AHL20(2)
<---------
AHL25(1)
-
<---------
GATA12
--------->
ANAC58
--------->
AHL12(3)
-
<---------
GLK1(1)
--------->
DOF5.7(1)
<---------
ICU4
<
--------->
AHL20(2)
--------->
WOX13(2)
<---------
AHL20(2)
---
--------------->
AtSPL8
<---------
WOX13(2)
--------->
AHL20(2)
<--
--------------->
AtSPL3
<---------
ICU4
<---------
ATHB12
<---------
ANAC58
--->
HVH21
<---------------
AtSPL8
--------->
ICU4
<---------
RAP2.6(3)
<---------
ANAC58
------->
ZAT18
<---------
ZAT6
--------->
GLK1(1)
---------->
DOF2
<---------
AHL12(3)
<--
gcgcacgagtaccatcttgttgaaatagtggtagtacaatttaagagaaatccaaatactaattaaaaaagccatcatgattaaaataattaggcttgaa
163800
<---------
AHL12(3)
<---------
AHL20(3)
--------->
YAB1
--------->
WOX13(2)
<---------
WOX13(2)
<---------
AHL25(1)
<---------
AHL25(3)
<---------
AHL20(2)
<---------
AHL12(1)
--------->
AHL25(1)
<---------
ARR11(2)
--------->
AHL20(2)
<---------
ARR11(1)
--------->
AHL12(1)
------->
TEIL
--------->
AHL25(1)
<---------
ARR14(2)
--------->
AHL25(3)
--------->
ARR11(2)
<---------
AHL20(3)
--------->
RVE1(2)
--------->
DAG2
<---------
AHL12(3)
--------->
ARR14(2)
--------->
DOF5.7(1)
--------->
AHL20(3)
<---------
CCA1(2)
--------->
ANAC55(2)
<---------
TOE2(3)
--------->
ANAC55(1)
<---------
TOE2(2)
<---------
AHL12(2)
--------->
ANAC46
<----
<---------
TOE1(2)
<---------
WOX13(2)
--------->
ANAC55(2)
-----
--------->
SPL7(1)
--------->
WOX13(2)
--------->
ARR11(2)
<----
-------->
TOE1(2)
--------->
AHL20(2)
<--------
HAHB4
-----
-------->
TOE2(2)
--------->
AHL25(1)
<---------
YAB1
<----
---------
SPL7(1)
--------->
AHL25(3)
--------->
DOF5.7(1)
--------->
ANAC58
------->
MYC3
------------>
AtSPL3
<---------
MYB52(1)
<---------
AHL20(2)
--------->
ANAC58
-------->
P
-------
-------------
AtSPL3
<---------
WOX13(2)
--------->
AHL20(2)
--------->
O2
<---------
DOF5.7(1)
-------------
AtSPL8
---------->
ID1
--------->
AHL20(2)
<---------
ICU4
--------->
RVE1(2)
<-------
MYC3
atcgtacgtagtcaaaaggtttgtccattaattaagaaattaataaaaatggaccatcatttccacgtatctacaaatctctcttacccccatatgcaca
163900
*
TSS
--------->
YAB1
--------->
YAB5
<---------
ICU4
--------->
ANAC58
<---------
YAB5
--------->
ANAC58
<---------
ATHB12
------->
TEIL
------>
NtERF2
--------->
At4g35610
--------->
DREB2C(2)
<---------
At4g35610
--------->
DEAR3(1)
<-----------
HVH21
---
MYC4
--------->
MYB52(1)
--------->
WOX13(1)
<---------
ANAC58
-->
MYC3
---------->
DOF2
<---------
ALFIN1
<---------
ANAC58
---
MYC3
<---------
AHL20(2)
--------->
AtMYB61
<---------
ANAC58
-->
MYC2
<--------
HAHB4
--------->
bZIP60(2)
------>
ZmHOX2a(1)
---
MYC2
<---------
ATHB12
-------->
P
------------>
CBF
<----------
DOF2
>
TEIL
--------->
SPL7(1)
<---------
ALFIN1
--------->
DEAR4(2)
--------->
RVE1(2)
<---------
ANAC58
tgtctgcgaaccccatcatttaaagccccaacgtagcaacctcaccgccttc
aatcatcaaacatccaaactctatcctttcgttttcttgtcagacaaa
164000
<-------
--------
<-------
------>
NtERF2
<---------
DEAR3(1)
<---------
RAP2.6(2)
<---------
RAP2.3(3)
<---------
ANAC46
<---------
RAP2.3(2)
--------->
RAP2.6(3)
--------->
ANAC58
--------->
ATERF1(1)
<------
NtERF2
---------->
DOF2
<---------
ATERF1(1)
------>
NtERF2
--------->
AtMYB61
----------->
HVH21
--------->
ATERF1(2)
<------
NtERF2
----------->
TGA1
<---------
ATERF1(2)
<---------------------
WRI1
<-----------
HVH21
<---------
RAP2.6(2)
<---------
DEAR3(1)
--------->
At4g35610
--------->
MYB52(1)
<----------
ID1
--------->
CCA1(2)
<---------
At4g35610
----------->
HVH21
--------->
ANAC58
<---------
YAB1
--------->
LBD16
--------->
ZAT6
<---------
DEAR3(1)
--------->
ICU4
<----------
DOF2
<---------
LBD16
<-
aactaatactag
atgggtaacagtttaggcggcaagaaaacgaccaaagtcatgaagatagacggcgagacttttaaactgaaaactccggtgacggctg
164100
===================================
bZIP_DOF
--------->
TGA1a
<---------
TGA1a
--------->
bZIP60(2)
--------->
ZAT14
--------->
ANAC58
<---------
ZAT14
--------->
O2
--------->
ANAC58
<---------
O2
--------->
ANAC58
--------->
ANAC58
---------->
DOF2
<-----------
HVH21
--------->
WRKY18(1)
------>
NtERF2
<---------
MYB52(1)
------>
NtERF2
<-----------
HVH21
--------->
LBD16
<---------
KAN1
===========================
bZIP_DOF
<---------
ARR11(2)
<---------
ARR11(3)
--------->
ANAC46
--------->
GATA12
--------->
ARR11(3)
--------->
LBD16
--------->
RVE1(2)
--
At4g35610
=====================
bZIP_DOF
--------->
ARR14(2)
->
At4g35610
<----------
DOF2
--------->
GLK1(2)
--------->
AHL12(2)
--
ZAT2
---------->
DOF2
<---------
ALFIN1
--------->
ARR11(2)
--------->
MYB46(3)
-----
ZmHOX2a(1)
<---------
LBD16
<---------
ARR14(2)
------>
NtERF2
<---------
TOE2(3)
<
aggaggtcttaaaagactttcccggccacgtcttgttagactccgaatccgtcaagcactacggtgcccgagccaaaccacttgag
gtatgttttttttt
164200
<-----------
RAV1(2)
<---------
ZAT14
--------->
ZAT14
--------->
ALFIN1
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
<------
MYB46(1)
<---------
ANAC58
<---------
ANAC46
<---------
MYB46(3)
<---------
WOX13(1)
--------->
MYB111(1)
<---------
RVE1(2)
--------->
MYB46(2)
<--
<-----------
GT1
<---------
YAB1
<-----------
RAV1(1)
<XXXXXX
<---------
ANAC46
--------->
YAB1
==========================
RAV
<
<---------
ANAC58
<---------
ATHB12
<---------
TOE2(3)
--------
--------->
YAB1
<---------
ANAC58
<---------
YAB5
----------->
GT1
<------
MYB83
<-------
-----------
GT1
<---------
YAB1
--------->
ANAC46
---------->
DOF2
<---------
AtMYB61
<---
tttttctatcagaactatatgttatgtttcttgttaaactatacgaatcatgttttgatagacaaagcgtttaatgttgtttggtgtgcag
gcgaagcag
164300
------->
MYC3
--------->
DOF5.7(1)
<-------
MYC3
================================================
bZIP_DOF
---------->
DOF2
--------->
ANAC46
----------->
HVH21
<---------
O2
<---------
DEAR3(1)
--------->
TGA1a
<------
NtERF2
<---------
ANAC55(2)
--------->
ATERF1(1)
--------->
ANAC55(2)
--------->
TCP20
<---------
TGA1a
--------->
TCP16(1)
--------->
O2
<---------
PCF2
------------->
DYT1
<------
NtERF2
<---------
ARR14(2)
<------
ZmHOX2a(1)
<------
MYB83
<---------
ARR11(2)
<------
ZmHOX2a(2)
<------
MYB46(1)
--------->
ALFIN1
<---------
GATA12
--------->
ALFIN1
<---------
ANAC46
<---------
ARR11(3)
--------->
DOF5.7(1)
--------->
MYB111(2)
<-----------
RAV1(1)
--------->
ZAT18
--------->
GATA12
---------->
DOF2
-------
MYB46(3)
<---------
AtMYB61
--------->
ETT(2)
--------->
ARR11(3)
<---------
ZAT14
XXXXXXXXXXXXXX
MIR773
<-----------
RAV1(1)
<---------
KAN1
----------->
ARR10
--------->
ZAT18
--------
P
<---------
At4g35610
--------->
ATERF1(1)
----------->
GT1
<-------------
DYT1
->
At4g35610
<---------
DOF5.7(1)
--------->
LBD16
--------->
DOF5.7(1)
====================
bZIP_DOF
--
At4g35610
<---------
RAP2.6(2)
--------->
ARR11(2)
<---------
HSFB2a(2)
<---------
GLK1(1)
<----
------
AtMYB61
<----------
DOF2
--------->
ARR14(2)
--------->
HSFB2a(2)
--------->
GLK1(1)
<----
aggttggaggcgaagcggctttattttgtggtggagccggtgaaagagtgtccaccgagaagggtaagatcaggaattcacgtgagtgcaaaggagaggc
164400
================================
HOX2a_HOX2a
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
RVE1(2)
--------->
GATA12
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ARR14(2)
<---------
ARR14(2)
<---------
GATA12
----------->
HVH21
<---------
GLK1(1)
<------
ZmHOX2a(1)
--------->
LBD16
=============================
HOX2a_HOX2a
--
<------
NtERF2
<------
ZmHOX2a(2)
<------
ZmHOX2a(1)
--------->
ALFIN1
<---------
ANAC58
==============================
HOX2a_HOX2a
<-----------
HVH21
<---------
ANAC58
=================================
HOX2a_HOX2a
<---------
DEAR3(1)
--------->
ZAT2
------>
ZmHOX2a(2)
<-----------
RAV1(2)
<------
ZmHOX2a(1)
--------->
KAN1
--------->
GLK1(1)
--------->
AtMYB61
--------->
DOF5.7(1)
-----
ANAC58
<---------
LBD16
--------->
GATA12
--------->
MYB46(3)
>>>>>>>>>
TBF1
------
-----
ANAC58
------>
NtERF2
<---------
GATA12
<---------
MYB55(2)
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
ttgagagtctcatgctggcccggagatcgtcttccgatctctccatactcaaaccaccaggaggatggacgacggaggaagaagaaggagcggtgaggag
164500
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AGI:
At2g01340.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G71015.1); similar to unknown [Glycine max] (GB:AAG38147.1); contains InterPro domain Trigger factor, C-terminal, bacterial; (InterPro:IPR008880)
Range:
from: 163953
to: 165289
Orientation: Forward
Links:
TAIR
MIPS
AIP
Please cite the corresponding
publications
when using AthaMap.
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