Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->ATHB12                <---------YAB1             --------->AHL20(2)             <---------AHL20(2)                                                 ------>MYB46(1)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                   ------>MYB83          --------->YAB1                                                        --------->AtLEC2         <---------YAB1                                                       ------->GAMYB   <---------ZAT18                                                      --------->YAB1   --------->ZAT14                                                      <---------ICU4  <---------ANAC46                                           <------NtERF2   --------->MYB46(3)  <---------ANAC58    --------->At5g28300  ------>ZmHOX2a(2) ------>NtERF2 <-----------GT1  <---------ANAC58   ----------->GT1   xxxxxxxxxxxxxxxx>smallRNA(i)    <---------YAB1 --------------->AtSPL8           <---------TOE2(3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ----->AtMYB61 <---------TOE2(3)---------->DOF2  <---------TOE2(3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---->ZAT14 <---------YAB1  --------->AHL20(2) ----------->HVH21     --------->YAB1 -----ZAT14 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)>>>>>>>>>WRKY18      ------->GAMYB     --------->TOE2(3) -->ANAC46<--------HAHB4   --------->AHL20(2)  --------->WRKY12     --------->MYB46(3) --------->TOE1(3)   cactgcgtactataattaatgaatggtaaataaaaaaaggtttgatccattgacgattttgtccgccttaaccatcataaccatccaaaccctaattcta  163600                                                                                             --------                                                                                            <-------MYC3                                                                                            ------->MYC3                                                                                         <---------ANAC46               ---------->DOF2                                                      <---------ICU4        --------->ALFIN1                                                      --------->TOE2(3)       ------->MYC3                                                    --------->ANAC58  <---------ANAC58       <-------MYC3                                                    --------->ANAC46  <---------ANAC58      <---------O2         --------->AHL20(2)                          --------->ANAC58  <---------AtLEC2      --------->O2   ----------->GT1 ----------->GT1            ------->TEIL  --------->ANAC55(2)  --   aaatttcaacgtggcagaaaagaaggtaattgaataacaaggtgatatactcttgaaataaacatgaatctacaagctatacttaatagttgcatgtgat  163700                                                                                    <---------ICU4                                                                                   --------->AHL20(2)                                                                                   <---------ATHB51                                                                                   <---------AHL20(2)                                                                           <---------ICU4                                                                           --------->ATHB12                                                                          --------->ICU4                                                                          <---------YAB1                                                                        <---------ICU4                                                                        --------->YAB1                                                                       <---------ATHB12             -                                                                  --------->ANAC58 --------->ICU4   <                                             <---------GLK1(1)    --------->ANAC58<---------AHL20(1)-                                     --------->AHL20(2)     <---------AHL20(2)   --------->YAB1   <--                            --------------->AtSPL3          --------->AHL20(2) <---------AHL20(2) ---                            --------------->AtSPL8       <---------ICU4--------->ICU4      <---------ANAC58 --->HVH21                  <---------------AtSPL8      --------->ICU4<---------RAP2.6(3)  <---------ANAC58 ------->ZAT18           <---------ZAT6      --------->GLK1(1)  ---------->DOF2--------->AHL20(2) <--   gcgcacgagtaccatcttgttgaaatagtggtagtacaatttaagagaaatccaaatactaattaaaaaagccatcatgattaaaataattaggcttgaa  163800                                                                 ------->TEIL                                                                 --------->ARR14(2)                                                                 <---------ARR14(2)             --------->DAG2                                      <---------ARR11(1)   --------->ANAC55(2)                                          <---------CCA1(2)  <---------TOE2(2)                                           --------->ANAC58  <---------TOE1(2)                      --------->YAB1       --------->O2                      <----  --------->SPL7                         --------->AHL20(2)   --------->ANAC58                  ----- -------->TOE2(2)                    <---------AHL20(2)       --------->ANAC55(2)               ----- ---------SPL7                       --------->AHL20(2)       --------->ANAC55(1)               <---- -------->TOE1(2)              <---------TOE2(3)      <---------ICU4                            <---- -------------AtSPL8     --------->AHL20(2)          <---------YAB1                       ------->MYC3 ------------>AtSPL3    <---------MYB52(1)<---------AHL20(2)  --------->ANAC46            <-------MYC3 -------------AtSPL3---------->ID1  --------->AHL20(2)<--------HAHB4              -------->P  -------   atcgtacgtagtcaaaaggtttgtccattaattaagaaattaataaaaatggaccatcatttccacgtatctacaaatctctcttacccccatatgcaca  163900                                                     *TSS                                                    <---------ICU4       --------->ANAC58                             --------->YAB1       --------->ANAC58                            <---------ATHB12      --------->SPL7                       ------>NtERF2  --------->At4g35610                     --------->DEAR3(1)  <---------At4g35610                     --------->DREB2C(2)                          <-----------HVH21 ---MYC3                  --------->MYB52(1)     --------->WOX13(1)                 <---------ANAC58 -->MYC3                 <---------ALFIN1--------->DEAR4(2)                         <---------ANAC58 -->MYC2         <---------AHL20(2)    <---------ALFIN1                       <---------ANAC58 ---MYC2     <--------HAHB4          --------->AtMYB61                        <---------ANAC58 ---MYC4    <---------ATHB12        --------->bZIP60(2)                    <----------DOF2 >TEIL------->TEIL---------->DOF2  -------->P  ------------>CBF            ------>ZmHOX2a(1)   tgtctgcgaaccccatcatttaaagccccaacgtagcaacctcaccgccttcaatcatcaaacatccaaactctatcctttcgttttcttgtcagacaaa  164000                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                            ------>NtERF2                                                                                           <---------ANAC46                                                                                           <---------RAP2.6(2)                                                                                           <---------RAP2.3(2)                                                                                           <---------DEAR3(1)                                                                                           <---------RAP2.3(3)                                                                                          --------->ATERF1(1)                               --------->ANAC58                                           --------->RAP2.6(3)                            <------NtERF2 ---------->DOF2                                <---------ATERF1(1)                           ------>NtERF2 --------->AtMYB61                              ----------->HVH21                          <---------RAP2.6(2)                <---------------------WRI1 ----------->TGA1                          --------->ATERF1(2)                <------NtERF2             <-----------HVH21                          <---------ATERF1(2)              <---------DEAR3(1)         --------->LBD16               --------->MYB52(1)    <----------ID1    --------->CCA1(2)              <---------At4g35610              ----------->HVH21--------->ANAC58     <---------YAB1                    --------->At4g35610   --------->ZAT6         <---------DEAR3(1)     --------->ICU4     <----------DOF2 <---------LBD16<-   aactaatactagatgggtaacagtttaggcggcaagaaaacgaccaaagtcatgaagatagacggcgagacttttaaactgaaaactccggtgacggctg  164100                         <---------O2                         --------->O2                         ===================================bZIP_DOF                         --------->ANAC58                         --------->ANAC58                         --------->bZIP60(2)                         <---------TGA1a                         --------->TGA1a                     <-----------HVH21                   <---------ZAT14                     ------>NtERF2                       --------->ZAT14                    --------->ANAC46               --------->ANAC58                   --------->LBD16                 --------->ANAC58        ===========================bZIP_DOF      ---------->DOF2  <---------ARR11(3)--------->LBD16             <---------MYB52(1)  --------->ARR11(3)------>NtERF2               --------->WRKY18(1) ->At4g35610  =====================bZIP_DOF    <-----------HVH21 --ZAT2 ---------->DOF2<---------ALFIN1    --------->GLK1(2) --At4g35610  <----------DOF2              --------->ARR14(2)             --------->MYB46(3) -----ZmHOX2a(1)  <---------LBD16          <---------ARR14(2) ------>NtERF2      <---------TOE2(3)  <   aggaggtcttaaaagactttcccggccacgtcttgttagactccgaatccgtcaagcactacggtgcccgagccaaaccacttgaggtatgttttttttt  164200                                                                                     <-----------RAV1(2)                                                                                    <---------ZAT14                                                                                    --------->ZAT14                                                                                   --------->ALFIN1                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                                 <---------ANAC46                                                                               <---------ANAC58                                                                               <------MYB46(1)                                                                               <---------ANAC58                                                                               <------MYB83   <XXXXXX                                                                              <---------AtMYB61                                                                              <---------MYB46(3)                                                                       <-----------RAV1(1)   <-------                                 <-----------GT1       <---------WOX13(1)     --------->MYB46(2)                          <---------ANAC58          <---------YAB1     ==========================RAV<                          <---------ANAC58   --------->YAB1           <---------TOE2(3)      --------      --------->YAB1      <---------ANAC46  <---------ATHB12    ----------->GT1<---------ANAC46   <-- -----------GT1      <---------YAB1     --------->ANAC46    ---------->DOF2   --------->MYB111(1)<---   tttttctatcagaactatatgttatgtttcttgttaaactatacgaatcatgttttgatagacaaagcgtttaatgttgtttggtgtgcaggcgaagcag  164300                                                                              ------->MYC3                                                                              <-------MYC3                                       ================================================bZIP_DOF                                       ---------->DOF2                       ====================bZIP_DOF                                     ----------->HVH21                       <---------ANAC55(2)                                   --------->LBD16                           <---------TGA1a                                  <---------DEAR3(1)                         --------->TGA1a                                 <------NtERF2                               --------->ANAC55(2)                                 --------->ATERF1(1)                         <---------O2      <------NtERF2            --------->TCP20                               --------->ANAC46  <------MYB83                 --------->TCP16(1)                            --------->O2  <------MYB46(1)              <---------ARR14(2)                          ------------->DYT1 --------->MYB111(2)        --------->ALFIN1                          <------ZmHOX2a(1) --------->ALFIN1         <---------ANAC46                        <------ZmHOX2a(2) XXXXXXXXXXXXXXMIR773    <-----------RAV1(1)                     --------->ARR11(3)   ---------->DOF2 --At4g35610             <---------AtMYB61                 ----------->GT1 <-------------DYT1 --------P <---------At4g35610--------->ATERF1(1)    --------->HSFB2a(2)--------->GLK1(1)       <---- ->At4g35610<---------RAP2.6(2)--------->ARR14(2)    <---------HSFB2a(2)<---------GLK1(1)       <---- -------MYB46(3)       <-----------RAV1(1)      --------->ETT(2) <---------ARR11(3) <---------ZAT14 ------AtMYB61  <----------DOF2<---------PCF2   --------->ZAT18----------->ARR10    --------->ZAT18   aggttggaggcgaagcggctttattttgtggtggagccggtgaaagagtgtccaccgagaagggtaagatcaggaattcacgtgagtgcaaaggagaggc  164400                       <------ZmHOX2a(2)                      --------->ARR11(3)                      <---------ARR14(2)                      <---------ARR11(3)                          ----------->HVH21                      --------->ARR14(2)                    <------ZmHOX2a(1)                     --------->GLK1(1)                   <------ZmHOX2a(1)                     <---------GLK1(1)            --------->MYB46(3)                  --------->LBD16  ------>ZmHOX2a(2)  <-----------RAV1(2)                          --                 <------NtERF2     =============================HOX2a_HOX2a               --------->ALFIN1           <---------ANAC58        ================================HOX2a_HOX2a           <-----------HVH21           <---------ANAC58       ==============================HOX2a_HOX2a            <---------DEAR3(1)          --------->ZAT2------>ZmHOX2a(2)         <---------MYB55(2)                <------ZmHOX2a(1) -----ANAC58    <---------LBD16   <------ZmHOX2a(2)--------->AtMYB61      <------ZmHOX2a(1)    ------ -----ANAC58 ------>NtERF2        =================================HOX2a_HOX2a>>>>>>>>>TBF1   <------ZmHOX2a(1)   ttgagagtctcatgctggcccggagatcgtcttccgatctctccatactcaaaccaccaggaggatggacgacggaggaagaagaaggagcggtgaggag  164500  Previous    Next  AGI:  At2g01340.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G71015.1); similar to unknown [Glycine max] (GB:AAG38147.1); contains InterPro domain Trigger factor, C-terminal, bacterial; (InterPro:IPR008880) Range:  from: 163953    to: 165289    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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