Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->ATHB12                <---------YAB5                <---------YAB1             <---------AHL25(3)             --------->AHL25(1)             <---------AHL25(1)             <---------AHL20(2)             --------->AHL20(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)            <---------YAB1                                                      --------->AtLEC2           --------->WOX13(2)                                                   ------>MYB83          --------->YAB1                                                        ------>MYB46(1)          --------->YAB5          --------->DOF5.7(1)                         ------->GAMYB          <--------HAHB4          <---------TOE2(3)                     <---------ICU4         <---------YAB1     <---------AHL25(3)                          --------->YAB1   <---------ZAT18          --------->AHL20(2)                          --------->YAB5   --------->ZAT14         --------->AHL20(2)    <---------TOE2(3)     <---------YAB1  <---------ANAC58        <---------WOX13(2)    >>>>>>>>>WRKY18       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------ANAC46    --------->At5g28300--------->GATA12    ------>NtERF2   --------->MYB46(3)  <---------ANAC58   ----------->GT1   xxxxxxxxxxxxxxxx>smallRNA(i)  --------->YAB1 --------------->AtSPL8  <---------WOX13(2)------>ZmHOX2a(2) <------NtERF2 <-----------GT1         -- ----->AtMYB61 <---------TOE2(3) --------->DOF5.7(1)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <- ---->ZAT14--------->AHL12(2)   ---------->DOF2--------->WRKY12<---------DOF5.7(1)        --------->KAN1 -----ZAT14<---------WOX13(2)   --------->DOF5.7(1)   <---------KAN1 ------->GAMYB     --------->TOE1(3) -->ANAC46xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  ----------->HVH21    --------->MYB46(3) --------->TOE2(3)   cactgcgtactataattaatgaatggtaaataaaaaaaggtttgatccattgacgattttgtccgccttaaccatcataaccatccaaaccctaattcta  163600                                                                                             --------                                                                                            <-------MYC3               ---------->DOF2                                                              ------->MYC3        --------->ALFIN1                                                      --------->ANAC55(2)       ------->MYC3                                                    --------->ANAC58  <---------AtLEC2       <-------MYC3        --------->AHL20(2)                          --------->ANAC58  <---------ANAC46      <---------O2       --------->WOX13(2)                            --------->ANAC46  <---------ANAC58      --------->O2       <---------WOX13(2) --------->KAN1      <---------GATA12         <---------ANAC58 ------->AHL12(1)    ----------->GT1     <---------RVE1(2)      --------->GATA12    <---------ICU4 --------AHL12(1)--------->DOF5.7(1) ----------->GT1            ------->TEIL  --------->TOE2(3)    --   aaatttcaacgtggcagaaaagaaggtaattgaataacaaggtgatatactcttgaaataaacatgaatctacaagctatacttaatagttgcatgtgat  163700                                                                                     <---------WOX13(2)                                                                                    --------->YAB5                                                                                    <---------AHL25(3)                                                                                   --------->AHL12(1)                                                                                   <---------AHL12(1)                                                                                   <---------AHL25(1)                                                                                   <---------ATHB51                                                                                   --------->AHL12(3)                                                                                   --------->AHL25(1)                                                                                   --------->AHL25(2)                                                                                   --------->AHL20(2)                                                                                   <---------AHL12(3)                                                                                   <---------AHL25(3)                                                                                   <---------AHL20(2)                                                                                   --------->ICU4                                                                                   --------->AHL25(3)                                                                                  --------->AHL20(3)                                                                                  --------->AHL25(2)                                                                                  <---------AHL20(3)                                                                                  <---------AHL25(2)                                                                                  --------->AHL25(3)                                                                                  <---------AHL20(1)                                                                                 --------->YAB1                                                                               --------->AHL25(1)                                                                               <---------AHL20(3)                                                                           --------->YAB5                                                                           <---------ICU4                                                                           --------->ATHB12                                                                          <---------YAB1                                                                          <---------YAB5                                                                          --------->ICU4                                                                        --------->YAB1                                                                        <---------ICU4                                                                       --------->ICU4--------->WOX13(2)                                                                  --------->ANAC58--------->AHL12(2)                                                            --------->AHL20(2) --------->AHL20(3)                                                            <---------AHL20(2) <---------AHL25(1)   -                                              <---------GATA12    --------->ANAC58--------->AHL12(3)-                                             <---------GLK1(1)   --------->DOF5.7(1)<---------ICU4  <                                     --------->AHL20(2)   --------->WOX13(2)   <---------AHL20(2) ---                            --------------->AtSPL8        <---------WOX13(2)   --------->AHL20(2) <--                            --------------->AtSPL3       <---------ICU4<---------ATHB12    <---------ANAC58 --->HVH21                  <---------------AtSPL8      --------->ICU4<---------RAP2.6(3)  <---------ANAC58 ------->ZAT18           <---------ZAT6      --------->GLK1(1)  ---------->DOF2<---------AHL12(3) <--   gcgcacgagtaccatcttgttgaaatagtggtagtacaatttaagagaaatccaaatactaattaaaaaagccatcatgattaaaataattaggcttgaa  163800                                          <---------AHL12(3)                                          <---------AHL20(3)                                         --------->YAB1                                       --------->WOX13(2)                                       <---------WOX13(2)                                     <---------AHL25(1)                                     <---------AHL25(3)                                     <---------AHL20(2)                                     <---------AHL12(1)                                     --------->AHL25(1)          <---------ARR11(2)                                     --------->AHL20(2)          <---------ARR11(1)                                     --------->AHL12(1)          ------->TEIL                                    --------->AHL25(1)           <---------ARR14(2)                                    --------->AHL25(3)           --------->ARR11(2)                                    <---------AHL20(3)           --------->RVE1(2)             --------->DAG2         <---------AHL12(3)           --------->ARR14(2)             --------->DOF5.7(1)    --------->AHL20(3)          <---------CCA1(2)   --------->ANAC55(2)         <---------TOE2(3)              --------->ANAC55(1)  <---------TOE2(2)        <---------AHL12(2)                 --------->ANAC46                  <----  <---------TOE1(2)        <---------WOX13(2)                 --------->ANAC55(2)               -----  --------->SPL7(1)        --------->WOX13(2)            --------->ARR11(2)                     <---- -------->TOE1(2)        --------->AHL20(2)           <--------HAHB4                            ----- -------->TOE2(2)        --------->AHL25(1)          <---------YAB1                             <---- ---------SPL7(1)        --------->AHL25(3)--------->DOF5.7(1)--------->ANAC58            ------->MYC3 ------------>AtSPL3    <---------MYB52(1)<---------AHL20(2)  --------->ANAC58    -------->P  ------- -------------AtSPL3   <---------WOX13(2)--------->AHL20(2)   --------->O2     <---------DOF5.7(1) -------------AtSPL8---------->ID1  --------->AHL20(2)<---------ICU4     --------->RVE1(2)<-------MYC3   atcgtacgtagtcaaaaggtttgtccattaattaagaaattaataaaaatggaccatcatttccacgtatctacaaatctctcttacccccatatgcaca  163900                                                     *TSS                                                    --------->YAB1                                                    --------->YAB5                                                    <---------ICU4       --------->ANAC58                            <---------YAB5       --------->ANAC58                            <---------ATHB12      ------->TEIL                         ------>NtERF2  --------->At4g35610                     --------->DREB2C(2)  <---------At4g35610                     --------->DEAR3(1)                           <-----------HVH21 ---MYC4                  --------->MYB52(1)     --------->WOX13(1)                 <---------ANAC58 -->MYC3          ---------->DOF2      <---------ALFIN1                             <---------ANAC58 ---MYC3         <---------AHL20(2)  --------->AtMYB61                        <---------ANAC58 -->MYC2     <--------HAHB4         --------->bZIP60(2)                    ------>ZmHOX2a(1) ---MYC2    <---------ATHB12       -------->P  ------------>CBF            <----------DOF2 >TEIL--------->SPL7(1)  <---------ALFIN1--------->DEAR4(2) --------->RVE1(2) <---------ANAC58   tgtctgcgaaccccatcatttaaagccccaacgtagcaacctcaccgccttcaatcatcaaacatccaaactctatcctttcgttttcttgtcagacaaa  164000                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                            ------>NtERF2                                                                                           <---------DEAR3(1)                                                                                           <---------RAP2.6(2)                                                                                           <---------RAP2.3(3)                                                                                           <---------ANAC46                                                                                           <---------RAP2.3(2)                                                                                          --------->RAP2.6(3)                               --------->ANAC58                                           --------->ATERF1(1)                            <------NtERF2 ---------->DOF2                                <---------ATERF1(1)                           ------>NtERF2 --------->AtMYB61                              ----------->HVH21                          --------->ATERF1(2)                <------NtERF2              ----------->TGA1                          <---------ATERF1(2)                <---------------------WRI1<-----------HVH21                          <---------RAP2.6(2)              <---------DEAR3(1)         --------->At4g35610               --------->MYB52(1)    <----------ID1    --------->CCA1(2)              <---------At4g35610              ----------->HVH21--------->ANAC58     <---------YAB1                    --------->LBD16   --------->ZAT6         <---------DEAR3(1)     --------->ICU4     <----------DOF2 <---------LBD16<-   aactaatactagatgggtaacagtttaggcggcaagaaaacgaccaaagtcatgaagatagacggcgagacttttaaactgaaaactccggtgacggctg  164100                         ===================================bZIP_DOF                         --------->TGA1a                         <---------TGA1a                         --------->bZIP60(2)             --------->ZAT14                         --------->ANAC58                <---------ZAT14                         --------->O2              --------->ANAC58                         <---------O2              --------->ANAC58                         --------->ANAC58        ---------->DOF2                     <-----------HVH21          --------->WRKY18(1)                     ------>NtERF2              <---------MYB52(1)                    ------>NtERF2              <-----------HVH21                   --------->LBD16          <---------KAN1        ===========================bZIP_DOF<---------ARR11(2)  <---------ARR11(3)--------->ANAC46       --------->GATA12  --------->ARR11(3)--------->LBD16        --------->RVE1(2) --At4g35610  =====================bZIP_DOF--------->ARR14(2) ->At4g35610  <----------DOF2              --------->GLK1(2)                               --------->AHL12(2) --ZAT2 ---------->DOF2<---------ALFIN1    --------->ARR11(2)             --------->MYB46(3) -----ZmHOX2a(1)  <---------LBD16          <---------ARR14(2) ------>NtERF2      <---------TOE2(3)  <   aggaggtcttaaaagactttcccggccacgtcttgttagactccgaatccgtcaagcactacggtgcccgagccaaaccacttgaggtatgttttttttt  164200                                                                                     <-----------RAV1(2)                                                                                    <---------ZAT14                                                                                    --------->ZAT14                                                                                   --------->ALFIN1                                                                                 <---------ANAC58                                                                                 <---------ANAC46                                                                                 <---------ANAC58                                                                               <---------ANAC58                                                                               <------MYB46(1)                                                                               <---------ANAC58                                                                               <---------ANAC46                                                                              <---------MYB46(3)                                                       <---------WOX13(1)     --------->MYB111(1)                                                      <---------RVE1(2)       --------->MYB46(2)  <--                                 <-----------GT1    <---------YAB1     <-----------RAV1(1)    <XXXXXX                          <---------ANAC46   --------->YAB1            ==========================RAV<                          <---------ANAC58  <---------ATHB12          <---------TOE2(3)      --------      --------->YAB1      <---------ANAC58  <---------YAB5      ----------->GT1<------MYB83  <------- -----------GT1      <---------YAB1     --------->ANAC46    ---------->DOF2   <---------AtMYB61  <---   tttttctatcagaactatatgttatgtttcttgttaaactatacgaatcatgttttgatagacaaagcgtttaatgttgtttggtgtgcaggcgaagcag  164300                                                                              ------->MYC3                                         --------->DOF5.7(1)                  <-------MYC3                                       ================================================bZIP_DOF                                       ---------->DOF2                       --------->ANAC46                                     ----------->HVH21                       <---------O2                                  <---------DEAR3(1)                         --------->TGA1a                                 <------NtERF2                               <---------ANAC55(2)                                 --------->ATERF1(1)                         --------->ANAC55(2)                               --------->TCP20                               <---------TGA1a                               --------->TCP16(1)                            --------->O2                               <---------PCF2                              ------------->DYT1      <------NtERF2            <---------ARR14(2)                     <------ZmHOX2a(1)  <------MYB83                 <---------ARR11(2)                 <------ZmHOX2a(2)  <------MYB46(1)           --------->ALFIN1                     <---------GATA12 --------->ALFIN1         <---------ANAC46                       <---------ARR11(3)     --------->DOF5.7(1) --------->MYB111(2)     <-----------RAV1(1)    --------->ZAT18  --------->GATA12     ---------->DOF2 -------MYB46(3)         <---------AtMYB61      --------->ETT(2) --------->ARR11(3) <---------ZAT14 XXXXXXXXXXXXXXMIR773  <-----------RAV1(1)   <---------KAN1    ----------->ARR10    --------->ZAT18 --------P <---------At4g35610--------->ATERF1(1)          ----------->GT1 <-------------DYT1 ->At4g35610    <---------DOF5.7(1)--------->LBD16       --------->DOF5.7(1) ====================bZIP_DOF --At4g35610<---------RAP2.6(2)--------->ARR11(2)    <---------HSFB2a(2)<---------GLK1(1)       <---- ------AtMYB61  <----------DOF2--------->ARR14(2)    --------->HSFB2a(2)--------->GLK1(1)       <----   aggttggaggcgaagcggctttattttgtggtggagccggtgaaagagtgtccaccgagaagggtaagatcaggaattcacgtgagtgcaaaggagaggc  164400                                   ================================HOX2a_HOX2a                                   ------>ZmHOX2a(2)                       <------ZmHOX2a(2)                      <---------RVE1(2)                      --------->GATA12                      <---------ARR11(3)                      --------->ARR11(3)                      --------->ARR14(2)                      <---------ARR14(2)                      <---------GATA12                            ----------->HVH21                     <---------GLK1(1)                      <------ZmHOX2a(1)                  --------->LBD16  =============================HOX2a_HOX2a                        --                 <------NtERF2    <------ZmHOX2a(2)      <------ZmHOX2a(1)                --------->ALFIN1           <---------ANAC58       ==============================HOX2a_HOX2a              <-----------HVH21           <---------ANAC58       =================================HOX2a_HOX2a         <---------DEAR3(1)          --------->ZAT2------>ZmHOX2a(2)             <-----------RAV1(2)           <------ZmHOX2a(1)       --------->KAN1--------->GLK1(1)             --------->AtMYB61               --------->DOF5.7(1) -----ANAC58    <---------LBD16  --------->GATA12 --------->MYB46(3)          >>>>>>>>>TBF1    ------ -----ANAC58 ------>NtERF2       <---------GATA12 <---------MYB55(2)      <------ZmHOX2a(1)   <------ZmHOX2a(1)   ttgagagtctcatgctggcccggagatcgtcttccgatctctccatactcaaaccaccaggaggatggacgacggaggaagaagaaggagcggtgaggag  164500  Previous    Next  AGI:  At2g01340.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G71015.1); similar to unknown [Glycine max] (GB:AAG38147.1); contains InterPro domain Trigger factor, C-terminal, bacterial; (InterPro:IPR008880) Range:  from: 163953    to: 165289    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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