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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                         <------ZmHOX2a(1)
                                                                                    ----------->RAV1(1)
                                                                                    --------->AtMYB61
                                                                                    <---------ALFIN1
                                                                                   --------->ANAC46
                                                                                   --------->MYB46(3)
                                                                                --------->MYB46(3)
                                                                               =================HOX2a_HOX2a
                                                                               <------ZmHOX2a(2)
                                                                              <---------ARR14(2)
                                                                              --------->AGP1
                                                                              --------->ARR14(2)
                                                                              --------->ARR11(3)
                                                                              <---------ARR11(3)
                                                                             <---------At4g35610
             --------->ANAC58       ----------->GT1                          --------->GLK1(1)
             --------->ANAC58    <---------STY1(2)                           --------->At4g35610
      --------->ANAC46   --------->HSFB2a(2)                             --------->LBD16--------->ANAC58
      --------->ANAC58  ----------------->AGL2                           <-----------HVH21
      --------->ANAC58--------->ZAT18                                    ------>NtERF2  --------->ANAC58
---------->GT1   ---------->DOF2 --------->STY1(2) --------->ANAC46    <---------LBD16  --------->ANAC46
 
aatggaaacaaggaagacgaaatagcgcccagaattagctagtaaaaacagtccaagtcaagtttaagacttgctccggcagatccaccacaggacacca  75100
                                                                                                  <-
                                                                                                  <-
                                                                                                  --
                                                                                             <------MYB46(1)
                                                                                             <------
                                                                                             <------MYB83
                                                                                            <-------
                                           ----------->GT1                                  <-------
                                           --------->ANAC58                                 --------
                                         ---------->DOF2                                 --------->MYB55(2)
                                      --------->LBD16                                    <---------MYB46(3)
                                      ------>NtERF2                             --------->ANAC46  <-
                                     --------->DEAR3(1)                      --------->TOE2(2)    --
                                    <------NtERF2                            --------->TOE1(2)------
                                   ------>NtERF2---------->DOF2  <---------TOE2(3)      --------->ALFIN1
                                <-----------HVH21                <---------TOE2(2)    <-----------RAV1(1)
                               <-----------RAV1(1)               <---------TOE1(2) --------->GLK1(2)
           --------->ZAT18<------ZmHOX2a(1)--------->ANAC58      <---------TOE1(3) ------->TEIL <---
 
aaatcagagacatgttcactaaaatcggaggaatttgtcgccgagaaagcaaaaagaaaacacaatccaaggttatggaatctacgaacctgtgggtggt  75200
          --------->ANAC58
       --------->ANAC58
       --------->ANAC58
       --------->ANAC46
     --------->ANAC46
------>ZmHOX2a(2)
--------AGP1
--------ARR11(3)       <---------LBD16
------->ARR14(2) ----------------->AGL3
---MYB46(3)------>NtERF2--------->HSFB2a(2)
--DEAR3(1)--------->ANAC46 <---------ARR14(2)          --------->At4g35610<---------ZAT6
--AtMYB61 --------->ANAC58 --------->ARR14(2)    <---------ARR11(3) --------->ARR14(3)
->ALFIN1  --------->DEAR3(1)               --------->ANAC58         <---------ARR11(3)
--------ARR14(2) <-----------------AGL3    --------->ANAC58         --------->ARR14(2)           ---
------->ARR11(3) <-----------------AGL1    --------->ANAC46         <---------ARR14(3)           <--
----------------->TaNAC69(2)           <---------HSFB2a(2)          <---------ARR14(2)  --------->ZAT14
------MYB46(3)   ----------------->AGL2--------->HSFB2a(2)          --------->ARR11(3)  <---------ZAT14
 
ggatctatacacgacgcccctccattttcggaacttgctcttctccaagctaaatcttatctgaaatagaagatattgtgttacagactagtttactgag  75300
                           <---------At4g35610
                           --------->At4g35610
                   --------->ATERF1(1)
                  <---------ATERF1(1)
                  <---------DEAR4(2)
                  ------>NtERF2
                  <---------ORA47(2)
                 --------->ATERF1(2)
                 <---------DEAR3(1)
                 <---------ATERF1(2)
                <---------ABI4(1)
                --------->SPL7
                --------->ATERF1(1)
               <------NtERF2
               ------>NtERF2
               <---------ATERF1(1)
              <---------MYB46(3)
              <---------SPL7
              <---------DEAR3(1)
             <---------ANAC58
    <-------GAMYB<---------RAP2.3(2)
   <------MYB46(1)<---------ERF1
   <------MYB83--------->ALFIN1
  <---------MYB46(3)   --------->ALFIN1
  --------->MYB55(2)<---------DEAR3(1)
 --------->ALFIN1<---------RAP2.3(3)
 <---------MYB55(1)<------NtERF2
 <--------P  --------->ALFIN1                                                           *TSS   <----
<---------MYB52(1)<---------RAP2.3(1)       --------->AHL20(2)                        --------->ANAC46
------>ZAT18 <---------ANAC58          ------>ZmHOX2a(1)                        --------->GLK1(1)---
-------LBD16 <---------ANAC46       ------>ZmHOX2a(1)                     <---------ETT(2)--------->At4g35610
 
tccggtgggttacagggcgggcggcgatggagcagagtcctcctcaaaaaaattccagtcttcttcttatcgctcgatcgacgaattccaggcagtggca  75400
                                                                                        <------MYB83
                                                                                        <------MYB46(1)
                                                                                       --------->MYB111(1)
                                                                                       <---------MYB46(3)
                                                                                       --------->MYB59
                                                                                      <--------P
                                                                                     <-------GAMYB
                                                                                     <---------ANAC58
                                                                                     <---------ANAC58
                                                                                    <---------MYB46(3)
                                                                                    --------->MYB55(2)
                                                                                    <------MYB83
                                                                                    <------MYB46(1)
                                                                                    --------->MYB52(2)
                                                                           <---------YAB1
                                                                          --------->AHL20(1)
                                                                          <---------AHL20(2)
  <------------CBF           --------->LBD16                              --------->AHL20(2)    ----
<---------YAB1             <---------LBD16                                <---------AHL20(1)   -----
--------CBF    <----------DOF2 ------>NtERF2                             --------->YAB1<---------AtMYB61
------>WRKY38(1)       <--------P        --------->ARR14(2)              --------->AHL20(2)   ------
 
ttgactattgctgcatttctttctgggtaagccgggcctctcggtataggcccaaaccattctaaggcccaaaccattatattaagttggttggtccacc  75500
                                                                                      --------->LBD16
                                                                                     --------->LBD16
                                                                           <------ZmHOX2a(2)
                                                                          --------->AGP1 <---------ATHB51
                                                                          --------->ARR14(2)
                                                                          <---------ARR14(2)
         --------->ZAT2                                                   --------->ARR14(3)
         --------->At4g35610                                              <---------GLK1(2)
      --------->At4g35610                                                 --------->ARR11(3)
      <---------At4g35610                                                 <---------ARR11(3)
     ----------->RAV1(1)                                                 <---------GLK1(1)
   <---------At4g35610          <---------At4g35610         --------->MYB46(2)      <---------LBD16
   --------->At4g35610          <---------ZAT2              --------->MYB52(2)------>ZmHOX2a(1)
   <---------ZAT2               --------->ZAT2              --------->MYB111(1)--------->TOE1(1)
   --------->ZAT2               --------->At4g35610       <---------MYB52(1)------>ZmHOX2a(2)
------>DOF2                  <---------At4g35610        ==========================HOX2a_HOX2a
---->AtMYB61       *TSS  <---------ARR14(2)             ------>ZmHOX2a(1)--------->GLK1(1)     <----
--->ANAC46    <<<<<<<ZML2--------->ARR14(2)             ===========================HOX2a_HOX2a -----
 
aaagtcagcagcagctagaacaagagcgactctgcagctgctcttctcccgcttccttcctgttagttagcctcagagatcctcgttccccgataatgga  75600
                          --------->ZAT2
                          <---------ZAT2
                          <---------ZAT14
                          --------->At4g35610
                          <---------At4g35610
                          --------->ZAT14                                        <-----------ARR10
                       <---------At4g35610                                    ----------->RAV1(1)
                       --------->At4g35610                                    <---------ALFIN1
                     <---------ZAT14                                         --------->RAP2.3(3)
                     --------->ZAT14                                       ------>NtERF2
                     --------->ZAT18                                      --------->DEAR3(1)
                   <---------RAP2.3(3)                                   --------->ATERF1(1)
                 <-----------HVH21                                      <---------ATERF1(1)
              --------->ZAT2                  --------->YAB1          --------->ATERF1(1)
              --------->At4g35610             <---------ICU4         ------>NtERF2
            <-----------RAV1(2)              <---------YAB1<---------GLK1(2) --------->DEAR3(1)
           ------>ZmHOX2a(2)                 <---------ATHB12       <---------PCF5
-----ARR14(2) <---------At4g35610   <---------CCA1(2) <----------DOF2<---------ATERF1(1)
---->ARR14(2) <---------ZAT2   <---------ZAT18<--------HAHB4        <---------PCF2
 
tttgggaaaactgatccagctgtctgcgctgctgtgcccatttcttctatcattacactttagaatcgctggggcctccgcccacatctactcttcccag  75700
                                                                               <---------KAN4(1)
                                                                               <----------TaMYB80
                                                                               --------->KAN4(1)
                                                                              <---------KAN4(2)
                                                                           ----------->GT1
                                                                          --------->MYB59
                                                                  ------>ZmHOX2a(2)
                                       <------NtERF2             <------ZmHOX2a(2)
                                    <------NtERF2               <---------ARR11(3)
                                    --------->ATERF1(1)         <---------ARR14(2)
                           ------>ZmHOX2a(1)                    --------->ARR14(2)
            <---------MYB52(1)     ------>NtERF2              --------->LBD16 ---------->TaMYB80
            --------->At5g28300   --------->ALFIN1           <---------HSFB2a(2)
         --------->DDF1  <------------------SPL14            --------->HSFB2a(2)
    --------->ANAC46    ------>ZmHOX2a(1)       <---------HSFB2a(1)<----------DOF2
 
cccttccacgatgtcggtaattctctcctcctctacggtggcagcgagggcatcttcgcctcttcccgatctttaatcaggtatattctatggattacat  75800
                                                                                                  <-
                                                                                                 ---
                                                                                                 <--
                                                                                                <---
                                                                                         <--------P-
                                                                                        <---------MYB52(1)
                                                                                     <---------LBD16
                                                                                     ---------------
                                                  <-----------RAV1(2)                <--------------
                                                 --------->ZAT14                    --------->MYB52(1)
                                                 <---------ZAT14                    <---------At5g28300
                                        <---------ALFIN1                     <------ZmHOX2a(1)  ----
                         --------->ANAC46   ------>ZmHOX2a(1)           <---------HSFB2a(2)    <----
     <----------DOF2--------->ANAC46 ------>ZmHOX2a(1)                 <---------LBD16  <-----------HVH21
 
tttcaactcttttgatgctctctactctactctactcatcctccctcctcactgcaggtttgagaacatcactctctggaggacaattaccggtaagggc  75900
                                                                                                  <-
                                                                                                ----
                                                                                              <-----
                                                                                             -------
  ----------->RAV1(1)                                                <---------LBD16         -------
--------->LBD16             ------>ZmHOX2a(2)                       --------->MYB52(1)       <------
-----NtERF2                <---------YAB1                          <---------SPL7         --------->At4g35610
--->NtERF2                --------->ARR11(3)                     --------->At4g35610     <----------
-------ATERF1(1)   --------->ANAC58                        --------->MYB55(2)      <------ZmHOX2a(2)
------ALFIN1       --------->ANAC46                      <---------MYB52(1)       <---------ARR11(3)
-------->DEAR3(1)  --------->ANAC58                    <---------DREB2C(2)        --------->ARR11(3)
-->AGL1    <--------P     <---------ARR11(3)------>ZmHOX2a(2)    --------->ZAT2   --------->AGP1----
---AGL1    <---------MYB52(1)<----------DOF2----------->GT1<---------MYB46(3)     <---------AGP1----
----->DEAR3(1)   ---------->DOF2            --------->YAB1--------->ALFIN1    ---------->DOF2<------
-----ABI4(2) --------->MYB52(2)            <------ZmHOX2a(2)     <---------At4g35610------>ZmHOX2a(2)
 
caccgcagcaatgggttagttcaagcagtgatctttgaagcctccgatcgtaacaatatcggtggttcagcttacggaggccaaagatctatttgctgca  76000
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AGI:  At2g01060.1   
Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G13040.1); similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G13040.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN66505.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447)
Range:  from: 73258    to: 75389    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At2g01070.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72480.1); similar to Os11g0546100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068063.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24763.1); similar to hypothetical protein OsJ_032883 [Oryza sativa (japonica cultivar-group)] (GB:EAZ18674.1); contains InterPro domain Transmembrane receptor, eukaryota; (InterPro:IPR009637)
Range:  from: 75520    to: 77865    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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