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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                      <---------ARR11(1)
                                      --------->ARR14(2)                                    <-------
                                      <---------ARR14(2)                                  <---------ANAC58
                        <---------ANAC46             <---------ARR14(2)               <-------GAMYB
                 --------->MYB46(3)  <---------CCA1(2)                             ------>NtERF2
                -------->P   --------->YAB1          --------->ARR14(2)            <------NtERF2
               --------->WOX13(1)    <---------ARR14(1)                           --------->LBD16 ==
     ---------->DOF2    <---------ANAC55(2)        --------->LBD16               <---------DEAR3(1)
  --------------->AGL15 <---------ANAC55(1)      <---------LBD16                <---------LBD16   <-
  <---------------AGL15 <---------ANAC58  ------>ZmHOX2a(1)               ---------->DOF2 <---------ANAC58
 ----------------->AGL1 <---------ANAC58 --------->TOE2(3)          <------ZmHOX2a(1)<---------MYB46(3)
 
caatacccaaaagagtatcaaccaattgcgtataagaaccgtatccttcatacgcggattcgaagggaataggagccaaaagacgcggcgattgcttctg  30340400
            <---------ANAC58
            <---------ANAC58
        <-------GAMYB
        <---------ANAC58
        <---------ANAC46
        <---------ANAC58
       <------MYB46(1)
       --------->MYB52(2)
       --------->MYB55(2)                                           --------->GLK1(2)
       <---------MYB46(3)                                           --------->ARR14(2)
       <------MYB83                                                 <---------ARR14(2)
      <---------AtMYB61                       --------->ANAC58     <---------GLK1(2)
      --------->MYB111(1)            --------->GLK1(1)         --------->At4g35610
      <---------MYB46(3)          --------->LBD16              <---------At4g35610
     <--------P                  --------->HSFB2a(2)      --------->ANAC58
    <-------GAMYB   ------>ZmHOX2a(2)<---------GLK1(1)<---------ANAC55(2)                 <---------ANAC46
   <---------MYB46(3)            <---------HSFB2a(2)<-----------RAV1(2)                   <---------ANAC58
   --------->ATHB12--------->At4g35610      ---------->DOF2    <------NtERF2              <---------ANAC58
  <---------AtMYB61<---------At4g35610--------->GLK1(2)   --------->ANAC58               <-------TEIL
--At4g35610 <---------ANAC46    <---------LBD16   <-----------HVH21<---------ARR14(2)   <---------ANAC46
===========================HOX2a_HOX2a<---------ARR14(2)<--------P --------->ARR14(2)<-----------RAV1(1)
-----ZmHOX2a(1)<XXXXXXXXXXXXXXXXXXXXMIR398B/C --------->ANAC58--------->MYB52(1)   ----------->RAV1(2)
 
aggagatggttggttgtgtgtgatctgagaacccatccggaaatctgaaaagccatcaggtaagccagcggaatctggattcaaacctctggtgcgtaga  30340500
                                                                                   <------NtERF2
                                                                                 <---------DEAR3(1)
                                                                                 <---------ANAC46
                                                                                --------->ATERF1(1)
                                                                                <---------At4g35610
                                                                                <---------ABI4(1)
                                                                                --------->At4g35610
                                                                                <------NtERF2
                                                                                <---------LBD16
                                                                               <---------ORA47(2)
                                                                               ------>NtERF2
                                                                               <---------RAP2.6(1)
                                                                               <---------RAP2.3(1)
                                                                               <---------ERF1
                                                                               <---------ATERF1(1)
                                                                               <---------RRTF1(1)
                                                                              <---------DEAR3(1)
                                                                              <---------DREB2C(2)
                                                                              <---------ATERF1(2)
                                                                              <---------RRTF1(3)
                                                                              <---------ANAC46
                    ---------->DOF2                                           <---------RAP2.3(2)
                 <-------GAMYB                              --------->YAB1    --------->ATERF1(2)
                <---------DEAR3(1)                 <---------ARR11(3)         <---------RRTF1(2)
             <---------ZAT18                       --------->ARR11(3)         <---------RAP2.6(2)
            --------->ALFIN1           <<<<<<<<<TBF1--------->CCA1(2)         <---------RAP2.3(3) --
       --------->MYB52(1)   --------->ALFIN1   ---------->DOF2               <---------LBD16      <-
 
gacattcggataacagtgggcgttgaagcaggtttgggcttcttcttcttaaaagatttagaatcatctcgagagcgtttggcggcggagagaagagaag  30340600
         ------>NtERF2
        ----------->HVH21
       <------NtERF2
       --------->ATERF1(1)
      <---------LBD16
      <---------At4g35610               <---------ANAC46
      ------>NtERF2                     <---------ANAC55(2)                                <--------
     <---------ANAC58                   --------->ANAC55(2)                              --------->ATHB12
     <---------ANAC58       <---------ARR11(3)                                  <------NtERF2
     <---------ANAC46   XXXXXXXXXXXXXXXXXXXX>MIR839                            ------>NtERF2
    <<<<<<<<<E2Fd      --------->MYB46(3)                                     --------->DEAR3(1) <--
    <<<<<<<<<E2Fc     --------->At4g35610     <---------TOE1(2)               <---------ETT(2)   <--
<----------DOF2      --------->RAP2.3(3)<---------ANAC58                    <---------ATERF1(1)<----
------->HSFC1(2)   <---------At4g35610  <---------ANAC58               --------->SPL7  <---------WOX13(1)
--------HSFC1(2)   --------->At4g35610  <---------ANAC55(1)      <---------At4g35610 --------->ATHB12
 
aagctttggcgcggacattgagagcagccaacatctcatcgttccgtcttatgttctccaatctcttccgctcgtactccgtcgccattgattgattgat  30340700
                            --------->ANAC46
                            --------->ANAC58
                      <----------DOF2                         *TSS
                   <-----------GT1              <---------CCA1(1)
                  ---------->ID1                <---------RVE1(1)                          ---------
                 <-----------GT1               <---------ARR11(3)                          <--------
            --------->ARR11(3)                 --------->ARR11(3)                <---------HSFB2a(2)
-WOX13(1)   <---------ARR11(3)                 <---------GLK1(2)              <---------ARR11(3) ---
-------ANAC58<---------CCA1(1)         --------->DAG2       --------->ANAC46  --------->ARR11(3)----
-------ANAC58<---------RVE1(1)        ---------->DOF2<-----------GT1   ---------->DOF2   ---------->DOF2
-----YAB1 <---------TOE2(3) --------->ANAC58  <---------RVE1(1)--------->AtMYB61 --------->HSFB2a(2)
 
gcttgagaaaattgagattttttctctttacacacaaacaaaaaaggagagatttttttcttcacaccaaaactgaaagaagacctagaagaaaaagaaa  30340800
                                               --------->RAP2.3(3)
                                               --------->RAP2.6(2)
                                               --------->DEAR3(1)
                                               --------->RAP2.3(2)
                                               <---------ATERF1(2)
                                              --------->RAP2.3(1)
                                              --------->ERF1
                                           --------->MYB46(3)
                               --------->At4g35610
                               <---------At4g35610
                               <------NtERF2------->GAMYB
                              <---------RAP2.3(1)
                              ----------->RAV1(1)          --------->AHL20(2)   <-----------GT1
                              ------>NtERF2<------------AtMYB77              <---------ICU4
                             <---------DEAR3(1)--------->ATERF1(2)          <---------YAB1
                             --------->ATERF1(2) <------NtERF2              <---------AHL20(2)
                             <---------RAP2.6(2)--------->LBD16          --------->AHL20(1)
  --------->MYB52(1)         <---------RAP2.3(2)<---------RAP2.6(3)      <---------AHL20(1)
-->GT1                       <---------ATERF1(2)------>NtERF2     ----------->GT1
--ID1              --------->ETT(1)       --------->At4g35610   --------->MYB52(1)          --------
------>DAG2        ----------->GT1      --------->MYB46(3)--------->AHL20(2)--------->AHL20(2)------
------>DOF2    <---------MYB46(3)     --------->YAB1  --------->AHL20(2)--------->AHL20(2)--------->ANAC46
 
aaagctaacaacatttgatgggtcggaaataggcggcagaataacaactgccgccaaaaaaataaaaaaacgaaaatatataattacacatttacaccaa  30340900
                               <---------TOE2(3)
                  --------->ZAT14                                   --------->GLK1(2)         ------
    ------>ZmHOX2a(2)         <-----------GT1             --------->SPL7             --------->TOE2(3)
->ANAC46          <---------ZAT14                       --------->TOE1(2)            --------->TOE1(3)
---->DOF2        --------->ALFIN1--------->TOE2(3)      <---------SPL7   <---------ICU4  ---------->DOF2
 
agtgtgatctaaattgaacggtgcagattagtttaacatttatcccaaattttaagaaccgtacgatggagcatcttaatgacttaaaccctaaaagaag  30341000
                 ------------>CBF   <---------At4g35610                                --------->LBD16
                <-----------HVH21   --------->At4g35610                              ----------->RAV1(2)
           --------->ZAT2       <-----------HVH21                                    <---------LBD16
       <---------ATHB12 <---------ANAC58                 <------------------------ANAC81         <--
   ------------>CBF     <---------ANAC58          --------->ZAT14   ---------->ID1  --------->MYB52(1)
----->GT1  <---------ZAT2    *TSS <-----------RAV1(2)   <----------DOF2  ------>ZmHOX2a(1)------>NtERF2
 
aaaaaccccaatcgagctctgtcaatggctcgcttcgtcagatgtctgagaagaacactcttttctaattcgtctccttctattgctcaccggagcccta  30341100
                                                                  <---------ANAC58
                                                                  --------->ANAC55(2)
                                                                  <---------ANAC58
                                                                  <---------ANAC55(1)
                                                         <---------ANAC46
                                                     <---------At4g35610
                                                     --------->ZAT2
                                            --------->At4g35610   --------->O2
                                            <---------At4g35610   <---------ANAC46
                                          <------NtERF2  <---------LBD16
                                          <-----------RAV1(2)     <---------O2
                                        --------->DEAR3(1)--------->LBD16
                                        --------->RAP2.6(2)       <---------ANAC55(2)
                                        ----------->RAV1(1)     <-----------GT1
               XXXXXXXXXXXXXXXXXXXX>MIR2111A/B       --------->At4g35610
           --------->ANAC58           <---------At4g35610<---------HSFB2a(2)            <---------At4g35610
           --------->ANAC58           --------->At4g35610--------->HSFB2a(2)            --------->At4g35610
           --------->ANAC46      <-----------GT1     <---------GLK1(1)             <---------GLK1(1)
 <------MYB83 ------->TEIL     --------->AHL20(2)    --------->GLK1(1)     --------->GLK1(1)   -----
 <------MYB46(1)        ------>ZmHOX2a(1)--------->LBD16<---------LBD16    ---------->DOF2<---------
<---------AtMYB61      --------->TOE2(3)--------->RAP2.3(2)<---------MYB52(1)      --------->GLK1(1)
----ZmHOX2a(1)--------->GLK1(2)<---------AHL20(2)    <---------ZAT2       --------->ARR14(2)  ------
 
ggattggtttgcccacgaatctaaatcctaaaattttaatcagccgcagatgtctgagctccgggagttacgtctcagaaatgcagaaatcagctttcca  30341200
                                                  <---------ATERF1(1)
                               <---------ANAC58  --------->ANAC58
                               <---------ANAC58  --------->ANAC46
                              <---------------AtSPL3
                  <---------ANAC55(2)            --------->ANAC58
                  --------->ANAC55(2)       <------ZmHOX2a(2)  <---------GLK1(2)
                 ------>ZmHOX2a(2)          ===================HOX2a_HOX2a
----------->RAV1(1)--------->LBD16         <-----------HVH21<-----------RAV1(2)
---->LBD16     <---------ARR14(2)  --------->ANAC58     ------>ZmHOX2a(1)
-DOF2    <---------RAP2.6(2)  <---------------AtSPL8 ------>NtERF2             <----------DOF2
--->HSFB2a(2)  --------->ARR14(2)  --------->ANAC58 --------->DEAR3(1)    ------->TEIL
 
gggcaacattttgcgactgatccgtaatgagattgagtacgaactcgatcactcgcctcctcttcaggttctctatgaatctctttttttttggttctat  30341300
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AGI:  At1g80710.1   
Description:  transducin family protein / WD-40 repeat family protein. similar to DDB2 (DAMAGED DNA-BINDING 2), nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G58760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67712.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680)
Range:  from: 30338315    to: 30340763    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At1g80720.1   
Description:  mitochondrial glycoprotein family protein / MAM33 family protein. similar to mitochondrial glycoprotein family protein / MAM33 family protein [Arabidopsis thaliana] (TAIR:AT1G15870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45048.1); contains InterPro domain Mitochondrial glycoprotein; (InterPro:IPR003428)
Range:  from: 30341030    to: 30342457    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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