Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------AHL20(2)         --------->AHL20(2)        --------->AHL20(2)        <---------AHL20(2)     <---------AHL20(2)       <---------ZAT14    <---------AHL20(2)        <---------ZAT18    --------->AHL20(2)        --------->ZAT18 --------WOX13(1)           --------->ZAT18 ----->ATHB12               <---------ZAT18 <---------ARR14(2) -----YAB1                 <---------ANAC46 <---------ZAT14 -----ATHB12          <-----------RAV1(1)   --------->ARR14(2)                  <-----------HVH21 <-- >MYB46(3)       <---------MYB52(1)         --------->ZAT14             ----------->GT1           ---   gatagattaattttattctgttttttgttgtgcgcactagtaagtgtatactctatagcattagatagaaaacagagtaacatgtcaaaacaacatccaa  30246100                                                                                    <---------WRKY18(1)                                                                                <---------MYB46(3)                                                                             <-----------RAV1(1)                                                    <---------At5g28300   --------->GLK1(2)                                                   <-----------GT1      <---------AHL20(2)                                             <---------AHL20(1)     --------->CCA1(2) -------ARR11(3)         <---------MYB59<---------MYB52(1)         --------->ARR11(3)              -- ------>GLK1(2)    ---------->DOF2    --------->MYB59             <<<<<<<<<RAP2.2  --------->WRKY38(1)   aatctaaaatcagtattagtcgaaaggcctaattcgatattcggtagtatattttaccgtctatgtttagatatataatctgttgttgactggaattcga  30246200                              <---------LBD16              --------->WOX13(1)                              <-----------RAV1(2)   ----------->HVH21                    ----------->GT1        ------->TEIL   <-------TEIL                          -----             ----------->RAV1(2) <------ZmHOX2a(1)--------->CCA1(2)                             <----      <-----------GT1      --------->RVE1(1)     --------->ARR14(2)  <-----------------AGL1   <------ --------->GT1 ----------->HVH21----------->GT1  <---------ARR14(2)  ---------->ID1           -------   atgctaaattactaaacctgaccagaaaaatatcaggagaaaatgaacttggatatgacatccatcaacttgtcccaattggtccaaagtctccatcttt  30246300                                                                                                    <                                                                                                   --                                                            <---------AHL20(2)                     <-       --------->ANAC46                                     --------->AHL20(2)                     <-    --------->ANAC46                                        <---------AHL20(1)                    ---    --------->ANAC58                               <---------ARR11(3)                             ---    --------->ANAC58  <---------MYB52(1)         <---------MYB52(1)                    ----------->RAV1(1) ---->AHL20(2)     <------------MYB.PH3(1)       --------->DOF5.7(2)                  --------->ANAC46 -----AHL20(2)    <---------At5g28300           <-------GAMYB    <---------AHL20(2) <-----------GT1-- ----DOF2        <-----------GT1               <---------ANAC55(2)            --------->AHL20(2)  <-- -->TOE2(3) --------->MYB46(3)                 --------->ANAC55(2)    <---------AHL20(2)       ------   aaatacaagacacaaccattaaccgtttttgcccatactaactcaaattccgttatcttcattttatttgatttaaactataaaatatacaacacaaaaa  30246400        ---------->DOF2                                                        <---------ALFIN1    --------->AHL20(2)                                                        <---------ZAT18    <---------AHL20(2)                                                        --------->ZAT14 ---------YAB1                                                               <---------ALFIN1       < ------->AHL20(2)                                                           <------NtERF2           - --------AHL20(1)                                                          --------->RAP2.6(2)     <- --------AHL20(2)                                                      --------->DAG2              *TSS ------>AHL20(2)                                   <---------ANAC55(2)---------->DOF2            ---- ------>YAB1                               --------->HSFB2a(2)  --------->ARR11(3)               <--- ------->AHL20(1)                          <---------HSFB2a(2)  <---------ARR11(3)              <---- -------AHL20(2)      <---------YAB1       --------->HSFC1(1)  --------->CCA1(1)         <----------DOF2 --->YAB1   ---------->DOF2  ------->TEIL  <---------HSFC1(1)  --------->RVE1(1)       ------>ZmHOX2a(1)   ttatattaaaaaaagaaagaaacgatgaatgaatcaacaagttttctagaaacacttatcttcaaatatctataaagcggcacactctcctctttcccat  30246500   --------->YAB1   <---------ICU4  <---------YAB1 ---------ICU4 -------->YAB1 --------YAB1                                                         <---------ALFIN1 ----->YAB1                                                        --------->ANAC46 ------ICU4                                <----------DOF2      <---------ARR11(3)---------->DOF2 -----ATHB12                 <------ZmHOX2a(2)            --------->YAB1--------->ZAT6   catcatcatcatcttcttcaaccttgtctcgatccaaaatttcatcttttaccaaaactattacaatatccctcactctacttgtaaagcttcaatcttc  30246600                                                                              ------>NtERF2                                                                             ----------->HVH21                                                                             --------->DEAR3(1)                                                                            --------->SPL7                                                                           ------>NtERF2                                                                          --------->LBD16                                                                         <---------HSFB2a(2)                         --------->DAG2                                  --------->HSFB2a(2)              ----------->GT1                                       <---------ATHB12           --------->MYB52(1)                   --------->HSFB2a(2)--------->ARR14(2)          ------->GAMYB ---------->DOF2         <---------HSFB2a(2)<---------ARR14(2)<---------ANAC58         <---------MYB52(2)                 <----------DOF2        <-----------ARR10 <---------ANAC58         --------->MYB46(3)       <---------ATHB12             --------->ANAC46 <---------bZIP60(2) -   ttcacttctcaacaaacagataaacaaaaagcttcaatctttgatactttctcgatggaacttatccccaatcttcccgacgacgttgctcgcgagtgtc  30246700                ------>MYB83                ------>MYB46(1)               ----------->RAV1(1)              --------->AtMYB61             --------->MYB46(3)                            --------->REM1(2)            ------>MYB83                                   --------->ZAT14            ------>MYB46(1)                          --------->ARR14(2)            -------->P <---------ANAC58       --------->ARR14(2)                                   <-           ------>ZmHOX2a(1)       ------>NtERF2----------->RAV1(2)                          --------          <---------MYB111(2)     --------->DEAR3(1) <---------ARR14(2)                     ---------        ------>ZmHOX2a(1) <-----------HVH21   <---------ARR14(2)                        --------->At4g35610 ----->ZmHOX2a(1)      <---------ANAC58<---------MYB52(1) <---------MYB52(1)     <-----------GT1 <---   tccttcgctcctcctaccaacagttccctgtcatcgcctccgtttgcagagcctggaaccgtgaagtctctctctctcagtttttacatcagcgaaaagc  30246800                                                                                                  ---                                                                                                  <--                                                                                         --------->GLK1(1)                                                                                         <---------GLK1(1)                                                                                         <------ZmHOX2a(2)                                                                 <------ZmHOX2a(2)      <-----------ARR10                                                                <---------ARR11(3)      <---------AGP1                                                              ----------->ARR10         <---------ARR11(1)                                                         <---------HSFB2a(2)            --------->ARR14(2)                                                        <---------LBD16                 <---------ARR14(2)                                                        ------>ZmHOX2a(2)              <---------CCA1(2)                                                       <------ZmHOX2a(2)               <---------ARR14(1) --------->ANAC58                                     <---------ARR14(2)              --------->LBD16 --------->ANAC58                                --------->ZAT2 --------->ARR11(3)  <---------LBD16 --------->ANAC46                         <---------ETT(2)  ---------->DOF2        --------->MYB52(1) --------ALFIN1                <-----------RAV1(2)    --------->ARR14(2)   ------>NtERF2<---------ARR11(3) ->DAG2             <---------YAB1        --------->ETT(2)--------->LBD16 --------->ANAC58    ------- ->DOF2       --------->ARR11(3)        --------->REM1(2)--------->HSFB2a(2)----------->RAV1(2)   --- --------HVH21<---------ARR11(3)    <-------TEIL --------->At4g35610      --------->ANAC58------>ZmHOX2a(2)   ttcacgccatagccaagagcttcttattctgtctcaggctcgtgtcgaccccgctggatccggaaagatcatcgctacgcctgaataccggatctctgtt  30246900                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)           <---------DEAR3(2)                                                          <---------MYB46(3)        <---------ARR14(2)           <---------ARR14(2)                              <---------MYB52(1)        <-----------HVH21            --------->ARR14(2)                      <------MYB46(1)    -----        --------->ARR14(2)<---------HSFB2a(1)                                <------MYB83<---------ARR14(2)      --------->LBD16     --------->HSFB2a(1)          <------ZmHOX2a(1)   <---------WOX13(1)  <-----    <---------LBD16       --------->ZAT2   <-----------HVH21  ------>ZmHOX2a(1)     <-------GAMYB<---  --------->ARR14(2)      <---------HSFC1(2)       ---------->DOF2        <---------ARR14(2)  <------  <---------ARR14(2)      <---------ZAT2 --------->LBD16      ====================================HOX2a_HOX2a  --------->GLK1(2)       --------->HSFC1(2)--------->WRKY18(1)           --------->ARR14(2)  ------- ------>HSFB2a(2)         --------->At4g35610   >>>>>>>>>>MYB80  <---------ZAT14   <---------ANAC58 -------HSFB2a(2)     <---------DEAR3(1) ------>ZmHOX2a(1)    ===================================HOX2a_HOX2a -->ZAT14 --------->ETT(1)<---------At4g35610<---------WRKY38(1) --------->ZAT14   <---------ANAC58 ------>HSFC1(1)<----------DOF2 ------>ZmHOX2a(1)  --------->MYB52(1) <---------At4g35610--------->ARR14(2)   ctcgaatccgggtcgggtctttggacggagcttcctccgattcctggtcaaaccaaaggacttcctctgttctgcagattggtttccgttggatccgatc  30247000  Previous    Next  AGI:  At1g80440.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At1g80440 [Arabidopsis Thaliana] (GB:Q9M8L2;GB:Q8LBH0); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G15670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45951.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro Range:  from: 30246499    to: 30247963    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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