Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------At4g35610                  --------->At4g35610                 ----------->RAV1(1)              --------->ANAC46                          --------->ZAT14            ---------->DOF2                             <---------ZAT14            --------->MYB52(1)               <---------REM1(2)          <---------MYB52(2)               --------->ETT(2)                       <---------ARR11(3)       --------->MYB46(3)                  <---------ETT(2)                 --------->GLK1(2)     --------->ARR14(2)       <---------ZAT14--------->ZAT14      <---------ICU4  <---------GLK1(2)     <---------ARR14(2)       --------->ZAT18<---------ZAT14 --------->At5g28300  --------->ARR11(3)   agcttcagaaccactaacgcagcacataagagtgttctatctctgtctacacagacattgcacggtgaacattgcaaaattctagatttttctaagccca  30212700                                                              ----------->HVH21                          <---------TOE2(3)                 ----------->GT1                         ---------->DOF2             --------------->AGL15                       <---------YAB1                <---------------AGL15               --------->ANAC55(2)                  ----------------->AG               --------->ANAC46               --------->ARR11(3)     ---------->DOF2               --------->ANAC58         <----------DOF2  --------->DAG2                             <               --------->ANAC55(1)     <---------ANAC58 --------->DAG2                              =               <---------ANAC55(2)     <---------ANAC58---------->DOF2--------->DAG2          -------               --------->ANAC58 <---------ANAC58    ----------------->AGL1             <---------ZAT14           ----------->RAV1(1)  <---------ANAC58    <-----------------AGL2     <-------TEIL ---------   tttcaatacaatccaacacgaaactattaaagtagcttagggcttgaagaaattgccaaaaggggtgacaaaaaagctagattcaagactggagagataa  30212800                                                                              <---------GLK1(2)                                                                              --------->KAN4(2)                                                                   ------>ZmHOX2a(1)                                                                 --------->HSFB2a(1)                                                                 --------->HSFC1(2)                                                                 <---------HSFB2a(1)                                                                 <---------HSFC1(2)                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                 --------->DEAR3(1)            --------->ARR11(3)                                <------NtERF2                  <---------ARR14(2)                   ------>ZmHOX2a(2)                           --------->ARR14(2)                  <---------At4g35610                       <---------TOE1(2) --------->ARR14(2)          <---------ANAC58      --------->ATERF1(1)    <-----------HVH21      <---------ARR14(2) ------ZmHOX2a(1) --------->At4g35610             --------->At4g35610        <----------TaMYB80 =========================HOX2a_HOX2a      --------->At4g35610 <---------ARR11(3) -->CCA1(2)      <---------AGP1------>NtERF2 ----------->HVH21<------ZmHOX2a(1) >CCA1(2) <---------ANAC58     <---------RAP2.3(1)<---------At4g35610     <---------ZAT18   gaggagctacttacttgttgatctgagcaatggcgccatcgaagaagatgacagatgtgtcataggatccttctagtgcatattctctcgctaatttcaa  30212900                       <-----------GT1                 <---------TOE2(3)                --------->MYB52(1)                <---------DOF5.7(2)              <---------MYB52(2)                                                                  ---             --------->LBD16                           <---------AHL20(2)                         <--             --------->At4g35610             <----------DOF2                              --------->LBD16            --------->ANAC58               ------>ZmHOX2a(1)                             <---------ANAC58            --------->ANAC58           <---------ARR14(2)                                <---------ANAC58         <---------ARR14(2)            --------->ARR14(2)                             <---------ARR14(2)         --------->ARR14(2)      --------->ANAC46      --------->AHL20(2)             --------->ARR14(2)   gtggtcttgtagacccgctaacgaattactacttcccaccatttcctcttttactaaaaaaatagcctattccaaaacaaaatcaagggttccgaggcaa  30213000                                                        <---------ANAC46                                                       <---------LBD16                                                     --------->GLK1(1)                                                     <---------GLK1(1)                                                    --------->ARR14(2)                                                    <---------ARR14(2)    <------NtERF2                                                  --------->LBD16        ------>NtERF2                                                <---------LBD16          <---------DEAR3(2)                                                <------NtERF2           <---------At1g77200                                               ------>NtERF2            <---------DEAR3(1)                               <----------DOF2--------->ARR14(2)      <-----------HVH21                     --------->ARR14(2)     --------->LBD16          <---------O2        <---------LBD16        ================================================bZIP_DOF        <---------HSFB2a(2) ------>ZmHOX2a(1)--------->ATERF1(1)     ===============================bZIP_DOF       ------>ZmHOX2a(2)<-----------GT1     <---------ATERF1(1)      --------->TGA1a       ============================HOX2a_HOX2a<---------ARR14(2)     --------->O2 ------>ARR11(3)     <---------GLK1(2)      ------>NtERF2            <---------TGA1a     ============ -------ARR11(3)     <---------ARR14(2)   <---------LBD16       ----------->HVH21        ---------->DOF2   gagcttcgatctcggagaacccaaattctccttctttctccctctccggctccggatttcggagatgtgactcgtcggcgaagatggaagacaaagtaga  30213100                      <---------MYB46(3)                     <--------P                  *TSS--------->MYB111(1)                                       <---------TCP15(1)             <-----------HVH21                                                  <---------TCP20            --------->bZIP60(2)                                                 <---------PCF5            --------->O2                                                        --------->PCF2            <---------O2           --------->MYB46(3)                       <-------TEIL            --------->TGA1a       ------>MYB83                             --------->GLK1(2)            <---------TGA1a       ------>MYB46(1)                          --------->ARR14(1)            ========================================bZIP_DOF               --------->CCA1(2)            ==================MYC_MYB                                     <---------ARR14(2)            ========================================bZIP_DOF              --------->ARR14(2)            ==================MYC_MYB                                     <---------GLK1(2)      <---       --------->ANAC58           -------->P <----------DOF2              --------->ARR11(1)  <------       --------->ANAC58    <---------YAB1   <-----------------AGL3 --------->AHL20(2)        <-------       --------->ANAC46 --------->ICU4   <----------DOF2           <---------AHL20(1)      --------->PCF2 =====================bZIP_DOF ------>ZmHOX2a(2)  <---------LBD16  --------->AHL20(1)    --------->ANAC46   agaagatggaagccacgtcgatggtagttatgatccaacctctctttctttattcgggttcgattcaaatattttagattcgggcccatctacggcccac  30213200                                                ------>ZmHOX2a(1)         ---------->DOF2                    <-----------GT1    ------------>CBF   <---------YAB1      <-----------GT1      --------->AHL20(2) -------DOF2         --------->YAB1  <----------DOF2           --------->AHL20(2)         <---------YAB1 ---ALFIN1           <---------ICU4  <---------DAG2    <-------TEIL          ---------->DOF2 --ZAT18<---------ATHB12          <-----------GT1<---------LBD16<---------AHL20(2)    <---------GLK1(2)   tttcaaaccaataaagcctaaaatcatcatcgattttaactttatttatcctctgggttcagaaattaaaatttcaaataaaaggccagattatcaattt  30213300                  --------->YAB1                 <---------ATHB12                                             ------>ZmHOX2a(2)               --------->WOX13(1)                                           <---------ARR14(2)    ---            --------->TOE2(3)                                           <---------At4g35610       <--      --------->YAB1                                                  --------->DAG2     <----------DOF2   --------->ANAC58                                           --------->MYB52(1)        <---------ANAC58   --------->ANAC46              <---------AHL20(2)        --------->YAB1   --------->ARR14(2)   <---   --------->ANAC58              --------->AHL20(2) ---------->DOF2  ---------->DOF2    <---------ANAC58   ctcacaagtcataacgtcaatcataagactcgaatttaaatttttgaatttagagaaagactcataacgaataaagctgatccagtttttgcttttgcat  30213400                                               --------->MYB52(1)                                              ---------->DOF2         ----------->GT1                                            --------->ANAC46          --------->YAB1        <XXXXXXXXXXXXXXXXXXXXXMIR828 <-------TEIL                 --------->ATHB12   <---------ANAC58              <---------ARR14(2)              --------->MYB46(3)   <---------ANAC58              --------->ARR14(2)     <---------TOE1(3) ------>ATHB12         <---------ANAC55(2)--------->ANAC46<------ZmHOX2a(1) -------ICU4 --------->ATHB12 ----------->GT1--------->AtMYB61   <---------ATHB12 ----TEIL--------->KAN4(1)---------->DOF2<-------TEIL   <---------TOE2(3)                       <----   tcattgctggattattcatttgaataagtaaagagtatatacatacaccaaaggggttaaggattcaaccattggtaacaacatcccaaatacaatgact  30213500                                                                                            <--------                                                                                       ---------->DOF2                                                                                    --------->ANAC58                        --------->ATHB12                                            --------->ANAC58                       --------->ICU4                                               --------->ANAC46                       <---------YAB1                                             ------>MYB83 ------                    --------->ICU4                                                ------>MYB46(1)                    <---------YAB1                                                --------->MYB52(1)               <----------DOF2                       <----------DOF2             --------->MYB55(1)         --------->GLK1(2)                        <-----------GT1               ------->GAMYB ------- ---------->DOF2  --------->YAB1              <---------AHL20(2)                --------->AtMYB61 ------DOF2  --------->At4g35610            <----------DOF2                    --------->MYB46(3)  <-   ttgtaaagaagaatcagctatattgattattgaataaacaaacactcttttatttctttttaaaacaactatatagcttcaaccaaacgcaaagtaacca  30213600  Previous    Next  AGI:  At1g80350.1    Description:  ERH3 (ECTOPIC ROOT HAIR 3); ATP binding / nucleoside-triphosphatase/ nucleotide binding. Identical to Katanin p60 ATPase-containing subunit (AAA1) [Arabidopsis Thaliana] (GB:Q9SEX2;GB:Q8S9E4); similar to katanin, putative [Arabidopsis thaliana] (TAIR:AT2G34560.2); similar to katanin, putative [Arabidopsis thaliana] (TAIR:AT2G34560.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76004.1); similar to katanin [Gossypium hirsutum] (GB:AAP83637.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45973.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain Vps4 oligomerisation Range:  from: 30210207    to: 30213118    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g80360.1    Description:  aminotransferase class I and II family protein. similar to AAT/ATAAT/MEE17 (maternal effect embryo arrest 17), aspartate transaminase [Arabidopsis thaliana] (TAIR:AT2G22250.1); similar to AAT/ATAAT/MEE17 (maternal effect embryo arrest 17), aspartate transaminase [Arabidopsis thaliana] (TAIR:AT2G22250.2); similar to AAT/ATAAT/MEE17 (maternal effect embryo arrest 17), aspartate transaminase [Arabidopsis thaliana] (TAIR:AT2G22250.3); similar to unknown [Populus trichocarpa] (GB:ABK95269.1); contains InterPro domain Aminotransferases, class-I, pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotransferase, class Range:  from: 30213391    to: 30215695    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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