Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------AHL20(2)                             --------->AHL20(2)                            --------->AHL20(1)                                ------>NtERF2                  --------->ANAC58                                           <----------ID1      <----------DOF2       <---------AHL20(1)                          --------->YAB1      <---------DAG2       --------->AHL20(2)           --------->ZAT6  <---------ICU4              <   <---------ALFIN1      --------->AHL20(2)         --------->DOF5.7(2)--------->ICU4           <---- ------DOF2       --------->ANAC58                --------->ANAC46<---------ANAC46              -----   ttgccacacttttgcgaaataagcaaaaaatatatatatgtgtgtgtaatagacgttaccagtacttggtgtgatcatgaggccaaagagtattgaaatg  30204000                                                                  <-------TEIL                                                                 --------->GLK1(2)                                                                 --------->CCA1(2)                                                                --------->ARR14(2)                                                                --------->ARR11(1)             --------->At4g35610                                <---------ARR14(2)           <---------WRKY38(1)                                 <---------HSFB2a(1)       <------ZmHOX2a(1)                                       <---------HSFC1(2)      <------MYB83                                             --------->HSFB2a(1)      <------MYB46(1)                                         ----------->ARR10    <--------P                                          --------->DAG2               <---------MYB52(2) <---------ANAC46                                      --------->DAG2         --------->LBD16 <---------ANAC58                                     ---------->DOF2        --------->ANAC46 <---------ANAC58                                <---------HSFC1(1)         <---------LBD16 ---------LBD16               <-----------HVH21  <---------HSFB2a(2)    <---------ARR14(2) -----MYB46(3)       --------->YAB1              --------->HSFC1(1)     --------->ARR14(2)   <------- ---->ATHB12 <---------At4g35610                 --------->HSFB2a(2)   <---------GLK1(2)     <-------   gttgcggtaggagtcatcggcaatagtaaacccttcagaccacattttcttctcgaaaaagggggagattcgaggttctccgtagccactaactccttta  30204100                                                                                                  <--                                                                                             --------                               <------NtERF2                                   --------->At4g35610<--                              ------>NtERF2                                 <---------HSFB2a(1) <----                             --------->ATERF1(2)                            --------->HSFB2a(1)<-----                             <---------bZIP60(1)                            --------->HSFC1(2)-------           <----------DOF2   <---------ATERF1(2)                            <---------HSFC1(2)<------      <---------At4g35610 ----------->HVH21                            <---------HSFB2a(2)  ---------   <------ZmHOX2a(1)  ------>ZmHOX2a(1)                                --------->HSFB2a(2) <---------ANAC46 ---DOF2 --------->At4g35610 --------->bZIP60(1)                  <---------YAB1      --------->GLK1(1) --DAG2 --------->RAP2.6(2) --------->RAP2.6(3)                  <---------ARR11(3)   <---------GLK1(1)   tcggaggaagccgcttcaagcttcctctctgacggcatgtcgaatagggttttggacagagactcgatatcatcgagaagcttctgagaaatcccgtggt  30204200                                                         ======================HOX2a_HOX2a                                                         <------ZmHOX2a(1)                                                      <-----------RAV1(2)                                                    <-----------TGA1                                                   <---------TGA1a                                                   --------->bZIP60(1)                                                   --------->O2                                                   --------->TGA1a <---------GLK1(1)                            <------MYB83 ----MYB46(1)                                 <------MYB46(1)                         --------->HSFB2a(1) ->ALFIN1                                     <---------MYB46(3)                      --------->HSFC1(2) ----MYB83                                    ----------->GT1                         <---------HSFB2a(1) ----P                                 <---------ATHB12 --------->ICU4                <---------HSFC1(2) --GAMYB  --------->ANAC58      --------->At4g35610<---------O2               <------ZmHOX2a(1) -->MYB55(2)                    --------->GLK1(1)<---------DOF5.7(2)    <------ZmHOX2a(2)        <--- ---MYB46(3)                    <---------At4g35610<---------bZIP60(1)  =============HOX2a_HOX2a<---- >LBD16   --------->ANAC58   <------NtERF2   --------->ALFIN1          <-----------HVH21   <---------ALFIN1   tggctatctgaaacgctccccatgttttggaggcatctccaatgagggtggtaacgtcaggattagagaggtcgatcacaggaatggactcttccactgc  30204300                                          <---------MYB46(3)                                         <---------DEAR3(1)                                        <---------At4g35610                                        --------->ATERF1(1)                                        <-------GAMYB                                        --------->At4g35610                                        <---------ZAT2                                        <------NtERF2                                       ------>NtERF2                                       <---------ERF1                                       <---------ATERF1(1)                      --------->ANAC58 <---------MYB46(3)                      --------->ANAC58 <---------RAP2.3(1)                   ----------->HVH21  <---------RAP2.3(3)                   <---------SPL7     <---------ATERF1(2)                 --------->ALFIN1     --------->ATERF1(2)                <------ZmHOX2a(1)     <---------DEAR3(1)             --------->ATERF1(1)      <---------RAP2.3(2)           <---------DEAR3(1)         <---------RAP2.6(2)           <---------ANAC46          --------->ATERF1(1)          <---------LBD16            <------NtERF2  <---------HSFB2a(2)          --------->ATERF1(1)        <---------At4g35610          <------NtERF2             <---------ATERF1(1)         <---------ORA47(2)         <---------RAP2.3(1)                 --------->ALFIN1         <---------RAP2.3(1)        <---------ORA47(2)            <---------LBD16        <---------DEAR3(1)         <---------RAP2.3(3)           <---------LBD16        <---------RAP2.3(2)        <---------DREB2C(2)      --------->MYB46(3)        <---------RAP2.3(3)        <---------DEAR3(1)     <---------DOF5.7(2) --------HVH21--------->ALFIN1    --------->ATERF1(1)--------->LBD16  <---------ANAC46              - -----ANAC46 <------NtERF2       <---------ATERF1(1)<-----------RAV1(2) <---------ZAT6              <   gtcgaatgagacggcggaggagggacgcagaagggagtcggcggctgtgagtttccaggtgaacgactcggggagtgtttggagactgcctaagttacca  30204400         <---------At4g35610     <---------ZAT18   <---------ARR11(3)            --------->ZAT18   --------->ARR11(3)       <---------ANAC46  <---------CCA1(2)         <---------ANAC58                               <----------DOF2  --------- -------->ANAC55(2)         <---------ANAC58                       ------------>CBF----------->TBP -- ---------ANAC55(2)      ----------->HVH21                    <---------ANAC55(2)<-----------TBP   <-   atacatatctcttctgctagtgaaggcatgacttgtgaactaatgagagaatgggatgctcatcacataaacaattactttggatatatatgcatagata  30204500                                                       --------->YAB1                                                   --------->ARR14(2)                                      --------->AHL20(1)                                      --------->AHL20(2)           --------->AHL20(2)   ------>ZmHOX2a(1)                          --------->ARR11(3)       <---------ARR14(2)                   <----------DOF2                          <---------ARR11(3)   <-------TEIL  ---------->DOF2            ============= -->ARR10    <---------YAB1<------ZmHOX2a(2)  --------->AtLEC2 ----------->GT1       ---------->ID1 ------->ZAT14      ------->TEIL      <---------AHL20(2)  --------->YAB1          --------------->AtSPL8 --------ZAT14  ------->TEIL          <---------AHL20(1) <---------YAB1         <-----------GT1   ctacacacatatgttatgaatgtatgtagatcacagcaaatttattacatgcatatatgatgataaagataaaatcagtttatttctgtccttttttgtt  30204600                                               --------->CCA1(2)                                              <---------ARR11(3)         --------->ANAC46                     --------->ARR11(3)                                   --        ------->GAMYB              --------->ICU4      --------->TOE2(3)                           <-       --------->MYB46(3)          <---------ZAT6  --------->ANAC46           <---------AHL20(2)   <-      -------->P   --------->AHL20(2) <---------YAB1  <---------ICU4     <---------ARR11(3)       ---   <------ZmHOX2a(2)--------->ATHB12--------->ATHB12  --------->ATHB12   --------->AHL20(1) ========= =========HOX2a_HOX2a            ----------->GT1  <-------TEIL    <----------DOF2           <--------   gagcgatcaacccccaagagatttattagcaaatgtagtgattagtgagatatacatcattagtttttctttgtatatattatatcaagtttaagtatat  30204700                                                              --------->TOE2(3)                                                             <--------HAHB4                                                             --------->YAB1                                                             --------->ATHB12                                                            <---------YAB1                   --------                                                     --------->ANAC58                        <-------                                                     --------->ANAC46                        <-------                                                     --------->ANAC58                        <-------                                                 <------ZmHOX2a(2)                           --------         ------------>CBF   ---------->DOF2     --------->ARR14(2)          <---------ANAC58--------- --------->GT1            --------->TOE2(3)     <---------ARR14(2)          <---------ANAC58<-------- -----MYB46(1)          ------->TEIL    --------->YAB1    --------------->AGL15       <---------WOX13(1) -----MYB83        <------------CBF  --------->WOX13(1)   <---------------AGL15     --------->ATHB12 ------>MYB59     --------->ATHB12--------->ANAC58  --------------->AtSPL8  <---------ANAC55(2) =========================================================================MADS_MADS<---------YAB1   - -------AGL15    <---------YAB1   --------->ANAC58------>ZmHOX2a(2)         --------->ANAC55(2) <----   ttggtaaaactttcaatttttcattgaacctaaagctagcaattagattggatccacgtactatcattagcaaataatacgtggtttgattggcatatct  30204800                                                                                       <-----------GT1                                                                               --------->ANAC55(2)                                                                               --------->ANAC58                                                                               --------->bZIP60(2)                                                                               --------->O2 ->ARR14(2)                                                 --------->ANAC46   --------->ANAC55(1) --ARR11(1)                                                 --------->ANAC58   --------->ANAC58 --ARR14(2)                                                 --------->ANAC58   --------->ANAC46 --ARR11(3)                                              --------->TOE2(2)     <---------ANAC55(2) ->ARR11(3)                                              --------->TOE2(3)   <---------ALFIN1 >GLK1(1)             <---------AHL20(2)                 --------->TOE1(3) --------->DEAR3(2) -CCA1(2)            --------->AHL20(2)         <---------YAB1            --------->PCF2     -------- -------->ANAC55(2)  <---------AHL20(2)      <---------ARR11(3)           <---------TCP20<---------YAB1 ------DOF2--------->WRKY12      --------->ANAC55(2)     --------->TOE1(2)<---------TCP15(1) <-------   ttatgtaatgtagttgacgaaaattttttttttttatgtaatgccaatttcttattaaacctaagcaatttgtttggacccacgtaatattacaattaaa  30204900  Previous    Next  AGI:  At1g80330.1    Description:  ATGA3OX4 (GIBBERELLIN 3-OXIDASE 4); gibberellin 3-beta-dioxygenase. Identical to Gibberellin 3-beta-dioxygenase 4 [Arabidopsis Thaliana] (GB:Q9C971); similar to GA4 (GA REQUIRING 4), gibberellin 3-beta-dioxygenase [Arabidopsis thaliana] (TAIR:AT1G15550.1); similar to gibberellin 3-beta hydroxylase [Prunus subhirtella] (GB:BAD91162.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283) Range:  from: 30202953    to: 30204429    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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