Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->ZAT14             --------->CCA1(2)     <---------ZAT14            --------->ARR14(2)     --------->ZAT18            <---------ARR14(2) <---------------AtSPL8         --------->ARR11(1) ----->DOF2                     --------->ARR11(3) ---ANAC55(2)                   <---------ARR11(3)                                   ---------->DOF2 -->ANAC58         <------ZmHOX2a(1)                                    --------->ALFIN1 -->ANAC58       <---------TOE2(3)                                      ----------->GT1 ---YAB1    --------->ICU4    ----------->ARR10                         <---------ZAT6   aagtgagtacagtgaagatgaggatgagaagaaagatatggatgagaagagagggtcgaagaaggccaatgggagtgtgaaacagaagaaagagtcgagt  30078100                                                                                                   <-                                                                                                   <-                                                                                         <---------ICU4                                                                                      <---------GLK1(2)                                                                                   ------>ZmHOX2a(1)                  <------ZmHOX2a(1)                                                --------->HSFB2a(2)             ------>ZmHOX2a(2)                   --------->YAB1                    <---------HSFB2a(2)           --------->ARR14(2)              <-----------GT1                         --------->LBD16 --           <---------ARR14(2)          --------->ARR11(3)                         <---------LBD16  --         <------NtERF2----------->GT1  <---------ARR11(3)                  <----------DOF2  ---------   tctgaagagtcgggatcggaggaagagtgaaacagaaatgagattttacattgataaacaaaacaaaaaatacaatacttttgtcctggaatcttgacgg  30078200                                                                                              -------         <-----------GT1                                                                      -------    <----------DOF2                                                                           ------- --------HSFB2a(1)                                                                       --------->YAB1 --------HSFC1(2)                                                                      --------->ANAC58 ------->HSFC1(2)                                               <---------DAG2         --------->ANAC58 ------->HSFB2a(1)           <------------CBF   <----------DOF2 <----------DOF2        --------->AtLEC2 >MYB52(1)                  --------->ATHB12<----------DOF2  <-----------GT1           --------->ANAC46   aaacttctttttcacagttttgatattctctcattggctcccttctctttctttctctctgtatcacttttcttcagagacacacatacaagcaaaacgc  30078300     ----------->GT1                                                                                -    <------ZmHOX2a(1)                   --------->ANAC46                                       <-----  <---------TOE2(3)                  --------->ZAT14                        --------->LBD16    <----- -->ANAC58 --------------->AtSPL8    <---------ZAT14                      XXXXXXXXXXXXXXXXXXXXX>MIR830* -->ANAC58 --------------->AtSPL3--------->MYB59                     <-----------GT1    <---------TOE1(3) -->ANAC46 <---------------AtSPL8<---------------AtSPL8             <-----------GT1     <---------TOE2(3)   gactaaggagaaaatcgtactaactcggacaaattttggtacacagcattacaaaacaaaacaaaactttttaactcccccaaatagtttagggtttagg  30078400           ------------>CBF           <------NtERF2         --------->PCF2         --------->PCF5        --------->ATERF1(1)        <---------PCF2        --------->PCF5        <---------ATERF1(1)        --------->TCP15(1)        ------>NtERF2       ----------->TCP11(1)       <---------TCP23       <---------TCP15(2)       ------>NtERF2       <---------ATERF1(1)                                         <---------YAB1       <---------PCF5                                              --------->ICU4      <---------RAP2.3(3)                                      <---------ANAC46     <---------ANAC58             --------->ANAC55(2)          <-------GAMYB       <---------MYB46(3)     <---------ANAC58             <---------ANAC55(2)         ----------->GT1     <---------MYB52(1) <------------CBF               <-----------RAV1(2)           <------MYB46(1)    <-------GAMYB -------->ATHB12           <---------ANAC55(2)        --------->DAG2           <---------TOE1(3) ----TOE2(3)               --------->ANAC55(2)       ---------->DOF2           <---------TOE2(3) ----TOE1(3)       --------->ANAC46           ----------->GT1 <------MYB83 <----------DOF2     ------   gtttattgggggccccaatacagaccatcaggtatcaggtaatgggccttgttaataaagtagtgggttataatgggctttacggttgtttcaagaagtg  30078500                                                                                                    -                                                                                                   --                                                                                                   --                                         <---------ANAC58                                  --------->GLK1(2)                    --------->YAB1  --------->At4g35610                                    <---------ARR14(2)             ----------->GT1        <---------At4g35610                                    --------->ARR14(2)             <------NtERF2     <------NtERF2                                              --------->ARR14(2)            ----------->GT1   ------>NtERF2                                               <---------ARR14(2)            --------->LBD16  <---------ANAC46                                         <---------LBD16        --------->ANAC46     <---------ANAC58                            <---------ANAC46<------NtERF2     <---------REM1(2)--------->At4g35610<---------ANAC58    <---------LBD16          --------->At4g35610 --->ALFIN1<---------ANAC46  <---------ANAC58    <<<<<<<<<TBF1 --------->LBD16<---------ZAT6  <------   gaagccctacaaggcgggaaaatcagaagaggcgcgtctgcttccgtcttcttcttcgtcttctccggagaggttttgtggtgttatcggcggaatccga  30078600                          <------ZmHOX2a(1)                        <---------ARR11(3)              <---------At5g28300                                  --------->ARR11(3)   ---------->DOF2     --------->At4g35610            <---------SPL7<------ZmHOX2a(2) -------->LBD16      <-----------RAV1(2)             <---------ANAC58 ------->ANAC58     --------->At4g35610              <---------ANAC58 ------->ANAC58    <-----------HVH21                --------------->AtSPL3<-------TEIL ---ETT(1)   <-----------GT1           <---------GLK1(1)          <---------At4g35610   cccgaaaatgccaaattacagcatcagaggaatcaatgttgaattcccattcgaggcgtaccagtctcagatcatatacatggacagagtcatcgagtct  30078700                                                                                      <---------ANAC58                                                                                      <---------ANAC46                                                   ------>MYB83                       <---------ANAC58                                                   -------->P                         --------->ANAC55(2)           <---------GLK1(1)                       ------>MYB46(1)             --------->ARR11(3)        <---------TOE2(2)                        --------->MYB46(3)            <---------ARR11(3)        <---------TOE1(2)                        --------->AtMYB61            --------->YAB1       --------->ALFIN1                       --------->ANAC58               <---------YAB1      <-------MYC3                            --------->ANAC46             --------->YAB1      --------->TOE2(2)                       --------->ANAC58            --------->ICU4    ---------      ------->MYC3                        <-----------GT1                 <---------YAB1   <---------YAB1      --------->TOE1(2)              <----------DOF2         <---------At4g35610<----------TaMYB80   cttcaaaacgtgggtttccctctccctctctctctctctcttttttacacaccaactctcttcaactgttttgttgatgatgatattcgcgtgatgatac  30078800                                 <----------DOF2                                <---------ANAC58                              <-----------GT1                         <---------AHL20(2)                <---------TOE1(3)                    <---------MYB52(1)                     <---------TOE2(3)                   <-------GAMYB<---------ANAC58     <----------DOF2        --------->ZAT6      ----- >YAB1            <-----------RAV1(1) --------->LBD16<---------DAG2      --------->ZAT14        <----   tctctctctctctctctattctgttgtttattttgctttccccaattctatatcgctttttagggttcttccccgttcacactgaccatttgggttctta  30078900                                                                                           ----------                                                                                        <---------ZAT2                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)                                               <---------YAB1                       --------->LBD16                                             --------->YAB1                         <---------HSFB2a(2)  <---------TOE2(3)                         <---------YAB1          <----------DOF2 --------->HSFB2a(2) --------->MYB52(1)                         --------->ICU4          <---------DAG2<---------LBD16 ---->AHL20(2)                       <---------ANAC58      <-----------HVH21     ------>ZmHOX2a(1) -----AHL20(2) <---------MYB46(3)    <---------ANAC58  <---------ARR14(2)       <---------SPL7   aattaacgctgaattagttgttaactaatcttgtttataacttgtgatgatgatgcagaaatgtcatgcgcttttggagagtcctacgggaactgggaaa  30079000  Previous    Next  AGI:  At1g79940.1    Description:  heat shock protein binding / unfolded protein binding. similar to DNAJ heat shock N-terminal domain-containing protein / sec63 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G21180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49512.1); similar to unknown [Populus trichocarpa] (GB:ABK92488.1); similar to hypothetical protein OsI_014762 [Oryza sativa (indica cultivar-group)] (GB:EAY93529.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Sec63 (InterPro:IPR004179); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro d Range:  from: 30074443    to: 30078225    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g79950.1    Description:  helicase-related. similar to helicase-related [Arabidopsis thaliana] (TAIR:AT1G20750.1); similar to DEAH helicase isoform 5-like [Oryza sativa (japonica cultivar-group)] (GB:BAD52706.1); similar to Os01g0592900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043456.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ83085.1); contains InterPro domain DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contains InterPro domain DEAD2; (InterPro:IPR010614); contains InterPro domain Helicase, ATP-dependent, c2 type; (Inter Range:  from: 30078473    to: 30084430    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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