Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------MYB52(1)                                                   <-----------TGA1                                                   <-----------HVH21                                                 <------------AtMYB77                                               <---------ARR14(2)                                               --------->ARR14(2)                                             <---------MYB52(2)                                            --------->ANAC46                                 --------                                            --------->ANAC58                      ------>MYB46(1)                                     <---------ANAC58      <---------YAB1         ------>MYB83                                 <---------ANAC58--------->DEAR3(2)              --------->MYB52(1)                                 <---------ANAC58--------->MYB46(3)             --------->AtMYB61                <---------HSFB2a(2)  <---------ANAC58      <------ZmHOX2a(2)    --------->DEAR3(1) ---------->HVH21      ---------->DOF2      --------->ANAC58--------->YAB1     --------->MYB46(3)   -   gagtgacattgcgaaactcgagaaaaaaagaagttgcttccgtcccaaggaaccgtcagggatcatagccaaaacgactccaccaacgatagaacccaca  29874100                                      --------->ZAT18                                      <---------ZAT18                                      --------->ZAT14                                  --------->ALFIN1                                <---------ZAT2                                --------->At4g35610                                --------->ZAT2                                   --------->MYB46(3)                                <---------At4g35610                              <---------ABI4(2) <-                              =========================HOX2a_HOX2a               <---------MYB55(2)--                              <------ZmHOX2a(1)                          --------->TOE2(3)         -- --------->DAG2           =============================HOX2a_HOX2a    <-----------GT1 <---------SPL7 --->RAV1(1)              <------ZmHOX2a(1)                     <---------WOX13(1)--------->AtMYB61<- --------->DOF2         <---------TOE2(3)       <------ZmHOX2a(2)     <<<<<<<<<GT-1  --------->DEAR3(1)   taaaaagttgaactaggtagacttctgaggaaggagctggagcactcgagatcgaactctgaaatgactgatttacctttgaaaccaccgtcccaatccc  29874200                                                                          --------->CCA1(2)                                   <---------RAP2.6(3)                    --------->GLK1(1)                                   --------->LBD16                   --------->ALFIN1                                 <---------LBD16                    <-------PIF5                             <---------At4g35610                    ------->MYC2                             ================================================MYC_MYB                             <-------GAMYB                          ------->PIF5                             --------->At4g35610                    <-------MYC2                            --------->MYB52(2)                      ------->MYC3                            <---------MYB46(3)                      <-------MYC3                            --------->MYB111(1)                     ------->MYC4                            --------->MYB55(2)                      <-------MYC4--------->At4g35610           --------->GLK1(2)--------->MYB111(2)         --------->ANAC58  <---------GLK1(1)          --------->GLK1(1) --------->MYB46(2)          --------->ANAC58 --------->ARR14(2)       --------->LBD16     <---------MYB55(1)        --------->WRKY18(1) <---------ARR14(2)      --------->LBD16     <---------MYB52(1)      <---------AtMYB61--------->TGA1a      <---------LBD16 --------->MYB52(1)      <---------ANAC58     <---------ANAC46     <---------LBD16 --------->CCA1(2)        ------>ZmHOX2a(2)    --------->PIF3(3)                < ----------->HVH21   --------->GLK1(1)        <---------ANAC58     <---------O2 <---------At4g35610-- --------->WRKY12    <---------GLK1(1)       <------ZmHOX2a(2)     <---------TGA1a              ----- --------At4g35610  --------->ARR11(3)      <---------ARR11(3)     <---------PIF3(3) --------->ZAT14- ------->At4g35610  <---------ARR11(3)      <---------ARR14(2)     --------->O2------->TEIL     <---- ------->ZAT2       <---------ARR14(2)      --------->ARR14(2)   <---------ALFIN1    --------->REM1(2) --------ZAT2       --------->ARR14(2)      --------->ARR11(3) <----------------PIF3(2)   <---------DEAR3(1)   aagctgaccggggaatcttacagatatcggtagttgccggattgcagatcgtgtggtcaagacagtgccacgtgggatatgcatctgtgaagacggtgat  29874300                                                                                            <------ZmHOX2a(2)                                                                                           <---------AGP1                                                                                           <---------ARR14(3)                                                                                           --------->ARR14(3)     --------->At4g35610                                                                   <---------     <---------At4g35610                                                                   --------->ARR11(3)     --------->ZAT2                                                                        <---------ARR11(3) --------->ARR14(2)                                                                        --------->GLK1(2) <---------ARR11(3)                                                                        --------->ARR14(2) <---------ARR14(2)                                                                        <---------ARR14(2) --------->ARR11(3)                                                          --------->ANAC58 ---------GLK1(1)                                                 --------->LBD16         <------ZmHOX2a(1) ----->TEIL                                                   <---------ARR14(2)     --------->HSFB2a(2) ---->ICU4    <---------WRKY38(1)                             --------->ARR14(2)     <---------HSFB2a(2) -------->RVE1(1)<---------TOE2(3)                            --------->GLK1(2) <----------DOF2   --- -----YAB1    <---------WRKY12   --------->MYB52(1) --------->ARR14(2)       --------->ANAC58------>ZmHOX2a(2)   gaatatctgctgagagtcaaaggttagcgcgagcccaacgagaactatctgtaagaactgcgagaatccgaaatcagacaagcttttctcgaggatcttg  29874400                                                                            <--------P                                                                     ------>NtERF2                                                                     --------->LBD16                                                                    --------->ANAC46                                                                    --------->ANAC58                                                                 --------->ARR14(2)                                                ----------->RAV1(1) --------->ANAC58                                            <---------MYB46(3)   ------->TEIL  <---------ANAC46                                            --------->ZAT18      <---------ARR14(2)           ------>ZmHOX2a(2)                                           --------->ALFIN1      --------->GLK1(2)          <--------                                         <---------ANAC58     <---------ATHB12 <---------ANAC58                                         <---------ANAC58     --------->MYB46(3)    <----------DOF2                                        <---------MYB46(3)  --------->MYB52(1) <---------ANAC58 --ARR10                               --------->ALFIN1   <------NtERF2   --------->ATHB12------>ZmHOX2a(2) ------>ETT(2)                       <-----------RAV1(1) ------>NtERF2    <---------MYB46(3)---------   tcgaaagtcagaggtgaagaagtgtcttcatcttcttcaatgtgggtgggcaacaatggtgccaacgaatccgccatggttgcttactttgatcgatctt  29874500                                                                                         --------->YAB1                                                                                      <----------DOF2                                                                                     ------>ZmHOX2a(2)                                                                                   --------->ARR11(3)                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                               <---------At4g35610                                                                              --------->ARR14(2)                    --------->TOE2(3)                                         --------->ARR11(3)                 <-----------GT1                                              <---------ARR11(3)              --------->YAB1                                                  <---------ARR14(2)              <---------ICU4                                                  <---------AGP1              -------->ATHB1                                           --------->WRKY18(1) <---------YAB1              <--------HAHB4                                 <---------AHL20(2)--------->CCA1(2)   --              --------->ATHB51                            --------->AHL20(1)  --------->AGP1    -----    --------->GLK1(2)     *TSS      --------->ANAC46      <---------AHL20(1) --------->GLK1(1)------- -ARR11(3)   <---------YAB1 --------->AHL20(2)           --------->AHL20(2)  <---------GLK1(1)<------ >ARR11(3)   --------->ICU4 <---------AHL20(2)  <----------DOF2   --------->ALFIN1 <---------ARR11(3)   gttgagaatgtgagaattattacatcaaaattaaaaacaaacaactagtacttttgaaaatatataatgtgtggtcaagagatctgatctttgatgatca  29874600                                                                                                  ---                                                                 <---------ANAC58                 <--                                                                 <---------ANAC58                 ---                                                          <---------ARR14(2)                      <--                                                          --------->ARR14(2)                      ---                                                          ------->TEIL <---------DAG2            <---    <------------CBF                                     <---------CCA1(2)   <---------ZAT6      ---- ------->YAB1                                       --------->ARR11(3) <----------DOF2           <--- ---->WOX13(1) <---------ANAC58          --------->MYB52(1)    --------->ALFIN1                ------ ----->CBF     <---------ANAC58<----------DOF2    <---------TOE1(3)   <----------DOF2         <------ ---YAB1     <-----------GT1 ---------->ID1       <---------TOE2(3)------>NtERF2              <------   atgagaaattgtttttttcttgtttgtttttgtctttttgaacaaactgtttaagatttgtatctgtgcgggcctttttgtgttaaactatgaccaataa  29874700  ---------->DOF2 ------>ATHB12 -------ICU4 ----->HAHB4 ------ATHB1 ------>ATHB51                                                                                  ----- ------ATHB51                               ----------->RAV1(1)                              <------- ----->ICU4                              --------->ANAC46                                    -------- ------YAB1                <---------ANAC46----------->HVH21                 <-------TEIL <---------MYB52(1) --->YAB1         <-------TEIL          --------->TOE1(2)          <---------At4g35610   <-------GAMYB ---ATHB12   --------->AHL20(2)       <-------TEIL           --------->HSFC1(2)          <---------RAP2.6(3) ---ATHB51   <---------AHL20(2)<---------REM1(1)             <---------HSFC1(2)         <---------MYB46(3)   taattgaagcacaatataaatacatagttgctgatgtaagtacatgcgacatatcaacatggacacttctgcttataaattcatactgggccgttaagta  29874800                                                     --------->ANAC58                                                     --------->ANAC46                                                     --------->ANAC58                                                 --------->PCF5                                                --------->PCF2                                              --------->ALFIN1                                            --------->ALFIN1                                            <-----------RAV1(1)                                           <-------MYC2                                           ------->MYC2                                           <-------MYC3                                           ------->MYC3                                          --------->O2                                          <---------O2                                          <---------TGA1a                                          <---------ANAC46                                          --------->ANAC55(2)          <---------WOX13(1)              --------->TGA1a        --------->ATHB12                  <---------ANAC58                   <-----------RAV1(1)       <---------YAB1                     <---------ANAC58                  ------->MYC3       <---------AHL20(2)                 <---------ANAC55(2)      <---------YAB1      --------->AHL20(2)                 ------------>OsbHLH66  <---------MYB52(1)      <---------AHL20(2)               ----------->HVH21      --------->ANAC55(2) ----->DOF2                           <-----------HVH21       <---------ANAC55(2)                   < --ANAC55(2)<---------MYB46(3)       --------->At4g35610     <-------TEIL   <-------MYC3  ----------- ->ANAC55(2)----------->GT1          <---------At4g35610 <---------------AtSPL3        <-------------   aagcccattttaattggttactcaaattgagaagtctaccgctcacgtgtggcccacgataagtacgttatgcttccacatgttgcagagaattgtgaaa  29874900                                                                          --------->AHL20(2)                  --------->ARR11(3)                                    --------->ANAC58 <---------AHL20(2)     --------->ANAC58                       ---------->ID1     <---------ICU4   ----------->GT1     --------->ANAC46                <------------------------ANAC81    --------->ANAC58--------->AHL20(2) ---------WRKY18(1)             --------->AHL20(2)            --------->ICU4    <---------YAB1 >GT1--------->ANAC58           <---------AHL20(2)            <---------YAB1 --------->ICU4 ----------TaNAC69(2)      <---------MYB52(1)               --------->YAB1<---------ARR11(3)   ------   cttgaccactcaactcttaacatctcgccgataattttttgtttttgttttttttgtttttgtcataattcgccaagaaattatgttatatataatataa  29875000  Previous    Next  AGI:  At1g79410.1    Description:  ATOCT5 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER5); carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter. similar to ATOCT6, carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT1G16370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64952.1); contains InterPro domain General substrate transporter; (InterPro:IPR005828); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 29872773    to: 29874526    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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