Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------SPL7                                                                        --------->TOE1(2)                                --------->ARR14(2)                     <---------ANAC58                                <---------ARR14(2)                 ----------->HVH21      ------->GAMYB                           --------->At4g35610                 <----------DOF2        ---------->CDC5                          --------->GLK1(2)                  ------->TEIL             <---------WRKY12                   ------>ZmHOX2a(1)                    --------->CCA1(2)             <---------WRKY38(1)        ---------->DOF2 --------->HSFB2a(1)            --------->ARR11(3)          --------->At4g35610      --------->LBD16   <---------HSFC1(2)             <---------ARR14(2)         --------->ANAC58    <---------LBD16<---------HSFB2a(2)               ----------->ARR10 <---------ANAC58--------->MYB52(1)   --------->MYB52(1)   --------->HSFC1(2)      ----------->GT1<---------DAG2     --------->ANAC58 --------->MYB46(3)--------->HSFB2a(2)<---------ANAC58 --------->ARR11(1)  <---------ANAC58   <------NtERF2 -------TGA1   <---------ARR14(2)     <---------ANAC46 --------->ARR14(2)  <---------ANAC58  -------- -------HVH21  --------->ARR14(2)     <---------ANAC58 <---------ARR11(3) --------->SPL7 --------->MYB46(3)   tcactcaccggaaagagtttcctcgaagcatctggatttgtcgtggtgagaggtgaagatatgaactttatgaccgtgcgaggcaagctcaacggccgca  29632500                            --------->ARR14(2)                            <---------ARR14(2)                     ----------->RAV1(2)                   <---------ALFIN1                 <---------ATERF1(1)               <---------ZAT2             ------->GAMYB               --------->ZAT2   <---------HSFB2a(2)                          <---------ARR11(3)               <---------At4g35610        <---------ZAT18       --------->CCA1(2)                 <--      --------->WOX13(1)   <----------TaMYB80    ----------->GT1<------ZmHOX2a(2)             <------    <---------ATHB12------>NtERF2--------->ANAC46<---------ZAT6--------->ARR11(3)             <------  --------->WOX13(1)<---------ATERF1(1)  --------->ANAC58      <---------ARR11(3)             <------ --------->MYB46(3)--------->DEAR3(1)    --------->ANAC58      --------->AGP1--------->ARR11(3)------ ->RAP2.6(2)   --------->At4g35610     --------->MYB52(1)     --------->GLK1(1)<---------ICU4 <------   tcaacaatcaatctctctgctccgcctgcatataccagaaacaacgcactagtgtaaatttgtgagatccaaacgagaagataatgacttattcatccgt  29632600                                                                         --------->ANAC46                                                                         --------->TOE1(1)                                                            ----------->GT1                                             --------->ARR14(2)         <---------LBD16       ---------->DOF2                       <---------ARR14(2)         --------->LBD16     <---------ATHB12                       --------->DOF5.7(2)   <---------ICU4 -------CCA1(2)                           <---------ANAC58  <------MYB46(1) ---ANAC55(1)                             <---------ANAC58  <------MYB83------>ZmHOX2a(1)        ---- ---ANAC46                      ------>ZmHOX2a(2)  <----------DOF2<-----------GT1        ------>ZmHOX2a(2) ---ANAC58               --------->ATHB12 <---------ANAC46 --------->MYB59               ============ --->LBD16    <-------GAMYB   <---------ARR11(3) --------------->AGL15  ========================HOX2a_HOX2a ---ANAC58   ----------->GT1  --------->ARR11(3) <---------------AGL15  --------->HSFB2a(2)  --------   gtatcaaatcaaagtctgttaaactagttattgatctctcaattgcgtttactctttgaagttggtaataactcctcggaaccaagatagatcgcagaag  29632700                                                                                <---------AGP1                                                                                <---------ARR14(2)                                                                                --------->AGP1                                                                                --------->ARR14(2)                                                                                <---------ARR11(3)                                                                    ------->TEIL--------->ARR11(3)                                                                  <---------SPL7<---------ARR14(3)                                                                 ------>ZmHOX2a(2)                                                                <---------------AtSPL3                                                                <------ZmHOX2a(2)                                                                --------------->AtSPL8           --------->ANAC46                                     --------------->AtSPL3       --------->YAB1                                           <---------------AtSPL8      <---------ATHB51                                         --------->ARR14(2)  <---------HSFB2a(2)      <---------ATHB12        <-----------RAV1(2)              <---------ARR14(2) ------>ZmHOX2a(2) ------>DOF2                 <---------ATHB12                  <-----------ARR10--------->ARR14(3) =======================HOX2a_HOX2a      --------->YAB1        <---------ARR11(3)--------->CCA1(2) ->At4g35610     <------ZmHOX2a(1)    --------->GLK1(1)        --------->ARR11(3)<------ZmHOX2a(2)   aaagaccaattatacgagaggaagaaggctaatcagggggaaatcaaaatcgaacaattgatgaagatcgtacctattccaagatctggatgtataatgg  29632800                         --------->ANAC46                                                           -                        ---------->ID1                                     --------->REM1(2)        <                       <-----------GT1                                   --------->LBD16            -              --------->HSFC1(2)                                  <----------DOF2                   <              <---------HSFC1(2)                                 <---------ANAC58              XXXXXX              --------->HSFB2a(1)                  <---------ANAC58    --------->LBD16         XXXXXX             ------->TEIL<-----------GT1           <---------ANAC58    <---------LBD16         XXXXXX            <-----------GT1              <---------WRKY18(1)     <---------ANAC58           <--------   <-------TEIL    <----------DOF2      ----------->HVH21    <---------MYB52(1)   *TSS     ----------   cgatgttcatctttgaaccttcttttttcgccatttacagacttgactggtttacgttcttctgtttgctttccccgtgaacaatttttagaggtgtcaa  29632900           ------>NtERF2          --------->ANAC46          --------->ANAC58          --------->DEAR3(1)          --------->ANAC58     ----------->HVH21 <---------RVE1(1)                                                                               ---- <---------CCA1(1)                                                                             <----- -------->AHL20(1)                                                                    <---------ARR14(2) ---------AHL20(1)                                                                 <-----------RAV1(2) -------->ARR11(3)                             --------->AHL20(2)                  ================== ---------ARR11(3)                           ----------->GT1            <------------CBF     -------- XXXXXXXXXXXXXX>MIR399D                     --------->DAG2           ------------>CBF ---------->DOF2 XXXXXXXXXXXXXX>MIR399E                --------->ANAC58             ===========================RAV  - XXXXXXXXXXXXXX>MIR399A                --------->ANAC58             ----------->RAV1(1)--------->GLK1(1) ---HVH21--------->MYB46(3)          --------->MYB52(1)          --------->PCF2 ------>NtERF2-------- ->GT1<-----------GT1     <------------CBF ---------->DOF2      <-----------TCP11(1)  --------->ARR14(2)   aagatatttgacccgcccgtcttggacagattggattaaaaacggaaaagttaatagagtttctcaaggcccacaattgttcggcccagatagcccaaca  29633000                    --------->ANAC55(2)                    <---------ANAC55(2)                    --------->ANAC58        <---------AHL20(2)       <---------AHL20(2)       --------->AHL20(2)       <---------AHL20(1)    <---------AHL20(2)                                      <---------YAB1    --------->AHL20(2)                                     <---------AHL20(1)   --------->AHL20(2)     --------->AHL20(2)              <---------ICU4   <---------AHL20(2)    --------->AHL20(2)              <---------YAB1 ------->GT1        --------->ANAC46                     --------->ICU4 ------RAV1(2)      --------->ANAC58                  <-------TEIL--------------->AGL15 ====RAV--------->AHL20(2)<---------AHL20(2)       <---------ANAC58                 <---------GLK1(1) --->RAV1(1)<---------AHL20(2)                     <---------ANAC58           --------->ICU4    <---- ---------->GT1 --------->ARR11(3)         <---------AHL20(2)     <---------------AGL15         ----- ->MYB52(1)--------->AHL20(2)  <---------YAB1      <---------ANAC46    ---------->DOF2  <---------ANAC46   ggtgattaaattatttaatatcacgaaattaatatcactgaatatttattctgacgttcattatttttctctgaaaagaaatgttgaattctgtatattt  29633100                                              ----------->RAV1(1)      --------->MYB46(3)  <---------YAB1   --------->AtLEC2   <----------ID1      --------->AHL20(1)<---------ANAC58                <----------DOF2 -----AHL20(2)        --------->AHL20(2) <---------ANAC46          ----------->GT1 ---->YAB1        --------->AHL20(2)     <---------ANAC58   ---------->DOF2 --------->ATHB12 <-------   ataagggaacaaatgtttatgtaaatatatgatttagtctgtgtcttgcaacattctatctccaaagtatggaaactttgatttgaatactccaaaattc  29633200                                                        <---------ZAT18                                                        --------->ZAT14                                                        --------->ZAT18                               --------->YAB1           <---------ZAT14                              <---------ATHB12       <---------ANAC58                  <---------AHL20(1)                 <---------ANAC58                  <---------ARR11(3)                 <---------ANAC46   <---------YAB1                  --------->AHL20(1)                --------------->AtSPL8                  --------->ARR11(3)                <---------------AtSPL8   --------->YAB1      ---------->DOF2   <-----------GT1       ---------->DOF2    <---------ANAC55(2)            <---- --GLK1(2)     <---------GLK1(2)            --------->YAB1       --------->ANAC55(2)            <----   tcagtgagaaaagaacagaatatttttaactaatcaaaattcagaatcaaaagttgagtacactaatacatattgtcattgatgactccattaccaagtc  29633300                                                   <---------ZAT18                                                <---------ANAC58     <----------DOF2                                     ----------->RAV1(2)       --------->ANAC46        --------->YAB1        --------->YAB1--------->ARR11(3) --------->ANAC55(2) -----ANAC58                 <---------AHL20(2) <---------ANAC58<---------MYB59                     - -----ANAC58             --------->AHL20(2) <---------ARR11(3)<-------TEIL            <----------DOF2   gtgagaagtttgataacatgccgaaaactaaataatagtacctgaagatttagtgccttccatatacataactttgtgcctcttgagtctttgactcttc  29633400  Previous    Next  AGI:  At1g78800.1    Description:  glycosyl transferase family 1 protein. similar to SUS5, UDP-glycosyltransferase/ sucrose synthase [Arabidopsis thaliana] (TAIR:AT5G37180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39410.1); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) Range:  from: 29630552    to: 29632882    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g78810.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN60296.1) Range:  from: 29633162    to: 29635446    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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