Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->ZAT2                 ---------->DOF2                                    <---------ZAT2              --------->ANAC46                                      <---------At4g35610              --------->ANAC58                              <---------CCA1(2)               ---------              --------->ANAC58         ----------->GT1 ---------->CDC5     <-----------GT1  <-------- -----------AtSPL3     --------->ARR11(3)         --------->ANAC58  --------->At4g35610    --------->AHL20(2) ---DOF2      --------->AtLEC2  ---------->DOF2   --------->ANAC58<-----------RAV1(2)      <---------ATHB12   agtactgaaactcttcaggcaaagagttcttgagcaaagcattgtaactcccaagcctaagcgtctcttcagctgataaaccttctctccctaataaata  29626900                                                                  <---------YAB1                      --------->ICU4                             -------->P                 <------MYB46(1)                               --------->MYB46(3)                 <------MYB83                                  <---------MYB52(2)                 ----------->GT1                               <---------MYB111(2)                --------->MYB46(2)    --------->YAB1           <---------MYB46(2)       --------->ARR11(3)            <---------YAB1            <---------MYB111(1)       <---------ARR11(3)            <------ZmHOX2a(2)  <---------At4g35610      <---------CCA1(2) <-----------GT1    <---------ZAT6  --------->At5g28300<---------ARR11(3) >AHL20(2)      --------->MYB59     <---------ARR11(3)  --------->At4g35610   --------->ARR11(3) -AHL20(2)--------------->AGL15     --------->ARR11(3)  <---------ZAT2    ---------->DOF2  <---------LBD16   agagacttaaatctttgtttggtaattatccagtttaagatcatagtgatcaagtgctagctgtaactaccattgacaaagagcttaaacttctcagggt  29627000                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)                       <-----------ARR10                                                           <-                       <---------ARR14(2)                                                      <-----                       --------->ARR14(2)                                                ----------->RAV1(2)                       <---------ARR11(3)                                             --------->HSFC1(2)                       --------->ARR11(3)                                             <---------HSFB2a(1)                       <---------AGP1                                                 <---------HSFC1(2)                       ------->TEIL                               <---------ZAT14     --------->HSFB2a(1)                      <---------ARR14(1)                          --------->ZAT18    ------->TEIL  --                  --------->MYB52(1)                        <---------ANAC46       ------->GAMYB <---              ------>ZmHOX2a(1)     --------->GLK1(1)     ------>ZmHOX2a(2)       <---------MYB52(2)              ==================HOX2a_HOX2a         <---------ANAC58              --------->MYB46(3)              =================HOX2a_HOX2a          <---------ANAC58            --------->MYB52(1) --   ttatagtcttgaagtcctgtaaacggatcttatgtgagaactccatctcccatgacttgatcgcgttttgcactgtctcttctaacgaaccttctggcca  29627100    --------->At4g35610                                                                     --------- --------ZAT2                       <-------TEIL                                         <------ZmHOX2a(1) ----ALFIN1                       <---------ARR14(2)                                ------->GAMYB --------->RAV1(2)                <---------GLK1(2)           --------->TOE2(3)  <-----------GT1 ------ALFIN1                     --------->ARR14(2)          --------->TOE1(3)  --------->MYB52(1) ------->ZAT2--------->AHL20(2)--------->YAB1     --------->YAB1            --------->AHL20(1)   cacctgcgctcaaaatcaaatactatcaacgaatcagattcacaaaatataaacatagcacataccttaagtgaaacatatattaaccgaaggaccttag  29627200                                                                         ------->TEIL                                                                      ==========================HOX2a_HOX2a                                                --------->YAB1        ------>ZmHOX2a(1)           <--                        --------->ANAC46       <---------YAB1     <-----------HVH21      ------>ZmHOX2a(2)                        --------->ZAT6     <-------GAMYB      ------->TEIL        ==============HOX2a_HOX2a >TOE2(3) ---------->DOF2                 ----------->GT1    <-----------GT1      <------ZmHOX2a(1)   tctggccttcttcaaagagctggttcacactattgaagtctggagggttatcatacctccattgaacctgtcctgcatcttcaaggactgatctatactt  29627300                                                           ------->TEIL                                                          <---------CCA1(2)                                                      <---------ANAC58                                                      <---------ANAC46                                                      <---------ANAC58                                                   <---------WOX13(1)                                                  <------------CBF                      <---------WOX13(1)                                      *TSS       --------->ATHB12                      <------------CBF                               <---------AHL20(2)<---------ICU4           ------------>CBF                           <---------DAG2       <---------YAB1   --------->YAB1       --------->ATHB12 -------CCA1(2)            <----------DOF2      --------->ICU4<----------DOF2        <---------YAB1   atctctctcttccctagtagccatattagctttttaatggagaatgagttatgattgcttgtatcttttataatctcacaatacatgttgattgatattt  29627400                                                 --------->DAG2                                 -----                                            --------->LBD16                                    ------                                 <---------MYB52(1)                                         ---------                           --------->ARR14(2)   ---------->DOF2                             <--------                           <---------ARR14(2)--------->ANAC46                      --------->YAB1                      ----------->GT1     <---------LBD16                       --------->WOX13(1)                     <---------ZAT6     --------->ARR14(2)         ----------->GT1<---------ATHB12   agaaattagtttaaaatggattagtggtgaatcccgttttcttatccgcgtaaagttgacattttgaagttgttaattgtctcaatcatattttctaaaa  29627500                                                                              --------------->AGL15                                                                              =======================                 <---------ICU4                                         <---------ICU4               ------>MYB83                                            <---------YAB1         <---------ATHB12                                            -------->HAHB4     --------->MYB46(3)                                              --------->YAB1    --------->ANAC58                                                <---------YAB1    --------->ANAC58                                                --------->ICU4 ---->DAG2     ------>MYB46(1)                                    <---------ICU4 ---->DOF2    ----------->RAV1(1)               <----------DOF2--------->ANAC55(2) >HSFB2a(2)  ------->GAMYB<----------DOF2   <---------ANAC58   <---------ANAC55(2)     <------ZmHOX2a(1) -HSFB2a(2) --------->MYB46(3)              <---------ANAC58 --------->AHL20(2)  --------->ZAT6   agttgcaaccaataaccaacaattacttctttggctgtccaaattggcttcttttctatccaattacataatgataatttctaagactaggaaatagaaa  29627600                        <---------ARR14(2)                        --------->ARR11(3)                   --------->ANAC58                   --------->ANAC46 <----------DOF2                        --------->YAB1                   --------->ANAC58 <---------------AGL15               <---------GLK1(1)               <-----------GT1      <---------DAG2                      --------->GLK1(1)       --------->ANAC58 --------->GLK1(2)                              --------->ARR14(2)       --------->ANAC58 <---------ARR11(3)                       <---------O2              <---------ARR11(3)     --------->TOE1(2)  --------->ARR14(3)                       --------->O2              --------->ARR11(3)     --------->TOE2(2)  <---------ARR14(3)              <----------DOF2<---------ARR14(2)  <---------GLK1(2) ===================================================MADS_MADS<-----------HVH21  ----------->GT1   atgtaaaccaaggaattttacaagaaaatcttgtgcaactttttgaagtatatgtttgctatatgtcacatcggatatcatatggtaatcaaagattttt  29627700              <---------YAB1            --------->ATHB51            <---------ICU4                                                   <---------ANAC58            -------->ATHB1                                                   <---------ANAC46           --------->AHL20(2)           <-----------GT1                      <---------ANAC58      --           <---------ATHB51         <---------AHL20(2)                      --------------->AtSPL3---           <---------AHL20(2)       --------->AHL20(2)               --------->YAB1             <----           --------->ICU4   --------->ZAT18                         <---------YAB1              <---- <---------DAG2<-----------GT1     --------->AHL20(2)            <---------AHL20(2)             <---- <----------DOF2            <---------ZAT18                     --------->AHL20(2)         --------->MYB52(1)   gaactttttggaaattattacagcaactagtgaaccatttaattactatataggtctctacttaaattttatgatgttttcgtacatctagtctaacagc  29627800  Previous    Next  AGI:  At1g78780.1    Description:  pathogenesis-related family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN63863.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39412.1); contains domain NTF2-like (SSF54427) Range:  from: 29626233    to: 29627338    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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