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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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------->GAMYB
--------->TOE2(3)
-------->MYB46(3)
------>ARR14(2)
--->O2
--->ANAC58
----ANAC55(2)
--->ANAC55(1)
--->ANAC55(2)          --------->YAB1                                        --------->ZAT18
--->ANAC58         ---------->DOF2                                           <---------ZAT14
----O2 --------->AHL20(2)                                                    <---------ZAT18    ----
--->ANAC46    --------->LBD16--------->DAG2                                  --------->ZAT14    <---
-----------------TaNAC69(2) ---------->DOF2       --------->YAB1       --------->MYB52(1)       <---
 
taaccacaaaaaaaatccagaataaagcataaaaagctatagaacatgaactataaaaacaaacacagagcaaaaaacagagcactaactcgaaaacaga  29517500
                                                                                                   =
                                                                                                   -
                                                                                                  <-
                                                                                                  --
                                                                  --------->ATHB12                --
                                                                 --------->ICU4                  ---
                                                          --------->LBD16                        ---
                                                        <---------LBD16                          ---
                                                      <---------ARR14(2)                         ===
                                                      --------->ARR14(2)                         >>>
                                                  <-----------------AGL1                         ---
                                                  ----------------->AGL1                         ---
                                                 <---------PCF2--------->YAB1                    ---
                        <----------DOF2          <---------ARR14(2)                             ----
                     ------>NtERF2               --------->ARR14(2)        <-------TEIL         ----
                    --------->LBD16              --------->TCP20 <---------YAB1               ------
                   --------->LBD16               --------->PCF5<---------ICU4                 ------
        --------->TOE2(3)                        --------->TCP11(2)     <---------ANAC58      ======
        --------->TOE1(3)                        --------->TCP16(1)     <---------ANAC58     -------
----->ZAT14        <---------LBD16              <---------TCP16(2)<---------ICU4         -----------
------ZAT14       <---------LBD16              <---------ZAT18--------->ICU4            --------->ANAC58
------ZAT18---------->DOF2                     --------->ZAT18<---------ATHB12          --------->ANAC58
 
gcacttaaaaacctgaaagttcccgggcttttgagaagacttggaaatagtggacccgaaccggaatcatgattagcgttcatcaacaagtactcaaccc  29517600
    --------->TGA2(2)
   <-----------HVH21
   <-----------TGA1
  --------->bZIP60(1)
  <---------TGA1a
  --------->O2
  --------->TGA1a
  <---------bZIP60(1)
  --------->ANAC58
  --------->ANAC58
  --------->bZIP60(2)
  --------->ANAC55(1)
  --------->ANAC46
  <---------O2
 <-----------STF1
<---------ALFIN1
============MYC_MYB
------>GAMYB
--------MYB55(2)
------->DEAR3(2)
------->MYB46(3)
--->MYB46(1)
------>ANAC58
------>ANAC58
============MYC_MYB
>>>>>>MYB98
------>ANAC46
----->P                          --------->LBD16
--->MYB83                       --------->ANAC55(2)     --------->O2
-->MYB46(1)          --------->YAB1<---------ARR14(2)   <---------O2          <---------WRKY38(1)
-->MYB83            <---------ATHB12                    <---------ANAC46<---------O2
--->MYB46(3)       ------>MYB46(1) --------->ARR14(2)   <---------TGA1a <---------TGA1a
->GAMYB          --------->AtMYB61<---------CCA1(2)  ----------->HVH21  <---------ANAC58
============MYC_MYB------>MYB83 --------->ANAC46  --------->TOE2(2)     <---------ANAC46
-->ANAC46    <---------ETT(1)  <---------LBD16    --------->TOE1(2)     <---------ANAC58
------------>TaNAC69(2)<-----------GT1           ----------->RAV1(2) ----------->HVH21
 
aacccacgtcaccattccgaccaatcttactgttcccgtatccgaagggataacctgcgacttgggttttctctgacttgggcaacgagaagaaatcgac  29517700
                                        --------->ATHB12
                                  --------->ANAC46
                                  --------->ANAC58
                                  --------->ANAC58
                                ---------->DOF2
                               --------->ARR14(2)
                               <---------ARR14(2)
        --------->HSFB2a(2)  --------->LBD16
        <---------HSFB2a(2)<---------LBD16<--------P                                              --
 <---------ANAC58          <---------At4g35610                                             ---------
 <---------ANAC58          --------->At4g35610                                    <---------O2   <--
 <---------ANAC46        ---------->CDC5<---------MYB46(3)                   <----------DOF2     <--
 
ggtctcgtgttctaaaacagagactagctctgcggaaacgccatggttgatcaccttgaagaagccgaagtcttcgcatgctttcacgagggcatgtttg  29517800
             <---------ARR11(3)           <---------GLK1(2)                               <---------ANAC58
             --------->ARR11(3)           --------->ARR14(2)                              <---------ANAC58
    <-----------HVH21                     <---------ARR14(2)                       --------->ARR11(3)
------->GLK1(2)        --------->LBD16  --------->LBD16                            <---------AHL20(1)
>ATHB12     <---------CCA1(2)       --------->GLK1(2)                              --------->AHL20(1)
-------GLK1(2)        <---------LBD16 <---------LBD16   --------->MYB52(1)         <---------ARR11(3)
-------ARR14(2)      <---------LBD16<---------ARR14(2)  -------->P        ------>NtERF2<-----------GT1
 
gattctgggtcagacatatctataaccgggattagagagaacccggattttggtattgctaccggtttagacaataccgccattgatatatttccttgtt  29517900
                                                                                           ------>ZmHOX2a(2)
                                                                                          <------ZmHOX2a(2)
                                                                                         <---------AGP1
                                                                                         <---------ARR14(3)
                                                                                         --------->ARR14(2)
                                                                                         --------->ARR11(3)
                                                                                         --------->ARR14(3)
                                                           <---------ANAC46              <---------ARR11(3)
                                                          <------ZmHOX2a(1)              <---------ARR14(2)
                                                    <---------LBD16                     --------->RVE1(1)
                                                  ------->TEIL   <-----------TBP     ---------->DOF2
                <---------YAB1                 --------->ANAC55(2)        --------->At4g35610
      <---------AHL20(2)                      --------->MYB59----------->GT1     <---------YAB1
  <---------GLK1(2)    <----------DOF2     *TSS<---------ANAC55(2)        <---------At4g35610      -
 
tgatagaatttttttgattttgatagctttgaaggctgagacattgggttatgtactcggaggagtgtatatatagcagatgagatgataaagatcttac  29518000
         --------->YAB1                                    ------->TEIL          --------->ARR11(3)
        <------ZmHOX2a(2)                        <---------------AGL15           --------->AHL20(1)
    --------->SPL7                               --------------->AGL15  <---------AHL20(2)
    <---------TOE1(2)                          ---------->ID1          --------->YAB1<---------LBD16
  <---------SPL7                              <-----------GT1          --------->AHL20(2)   <-------
  --------->TOE1(2)                  <---------ANAC55(2)  <---------CCA1(2)      <---------ARR11(3)
<---------------AtSPL3               --------->ANAC55(2)--------->ANAC55(2) --------->AHL20(2)
--------------->AtSPL8            <---------ATHB12 <----------DOF2     <---------AHL20(1)   --------
------>GAMYB              ---------->DOF2  <---------AHL20(2)          <---------AHL20(2)--------->SPL7
 
aacgacgtacgatcaaaactgttcaaaactaaagctaatcacttatttttttctcttttatgtatctatatcaataaaattgaatatatcgggacgatat  29518100
                                                                                                 ---
                                                                                                 ---
                                                                                                ----
                                                                                           ---------
                                                                                          <---------YAB1
       >>>>>>>>>>>>>>>>>LFY                                                             <---------ICU4
   --------->ANAC58                                                                     --------->YAB1
   --------->ANAC58                                                                    --------->ICU4
 ---------->DOF2      <---------AHL20(2)     ----------->GT1                        --------->AHL20(2)
--ARR11(3)         ----------->GT1      --------->AHL20(2)                          <---------AHL20(2)
->ARR11(3)    <---------YAB1      ----------->GT1             --------->ETT(2)      <---------YAB1
 
ttgcgaaagcctccattgtgattagttatttgctaaatagtaaaaaaatcgtttaaaatggtttgtcaacagttttttgtttttgttttaattatcatgg  29518200
    --------->ATHB12
------>ANAC58         <---------------AtSPL8
------>ANAC58     <-------GAMYB          ---------->DOF2----------->GT1
--->TEIL<------MYB46(1)   <-------TEIL  <---------AHL20(2)                                         <
>YAB1   <------MYB83 ---------->DOF2    --------->AHL20(2)                             <------ZmHOX2a(1)
 
acgtcaatgtttggtttttggggttaaagtacagaagtcaaatttaaagaagaattatcgagataaaacatacaatatttgagagcgataggaatttgat  29518300
                                                                                     <---------ICU4
                     ----------->RAV1(1)                                             --------->ATHB51
               --------->At4g35610     <---------ZAT18                               --------->ATHB12
               <---------At4g35610     --------->ZAT18                              <---------YAB1
              <---------MYB46(3)      <---------ANAC46                            <---------ICU4
           <-------GAMYB  <---------ICU4                <---------YAB1            --------->YAB1
          --------->MYB52(2)          <---------ANAC58  --------->ICU4           <---------YAB1
          --------->MYB55(2)          <---------ANAC55(2)               ------>ZmHOX2a(1)
          <---------MYB46(3)          <---------ANAC58--------->YAB1--------->ARR14(2)
          --------->MYB111(2)         --------->ANAC55(2)<---------ICU4 <----------DOF2
          <-----------RAV1(1)<---------ICU4      <-----------GT1    <---------ARR14(2)       <------
       ------------>MYB.PH3(2)       --------------->AtSPL3 --------->AHL20(2)<---------YAB1 -------
---------AHL20(2)----------->HVH21   --------------->AtSPL8 <---------AHL20(2)<---------AHL20(2)
 
attttatgggagtttgttggctgacaacataatcactagttgcgtactagttttccctcataatttataagtatccttttttttattattattgctgatt  29518400
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AGI:  At1g78440.1   
Description:  ATGA2OX1 (GIBBERELLIN 2-OXIDASE 1); gibberellin 2-beta-dioxygenase. Identical to Gibberellin 2-beta-dioxygenase 1 (GA2OX1) [Arabidopsis Thaliana] (GB:Q8LEA2;GB:Q9XFR8); similar to ATGA2OX2, gibberellin 2-beta-dioxygenase [Arabidopsis thaliana] (TAIR:AT1G30040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60925.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283)
Range:  from: 29516492    to: 29517944    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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