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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------->
GAMYB
--------->
TOE2(3)
-------->
MYB46(3)
------>
ARR14(2)
--->
O2
--->
ANAC58
----
ANAC55(2)
--->
ANAC55(1)
--->
ANAC55(2)
--------->
YAB1
--------->
ZAT18
--->
ANAC58
---------->
DOF2
<---------
ZAT14
----
O2
--------->
AHL20(2)
<---------
ZAT18
----
--->
ANAC46
--------->
LBD16
--------->
DAG2
--------->
ZAT14
<---
-----------------
TaNAC69(2)
---------->
DOF2
--------->
YAB1
--------->
MYB52(1)
<---
taaccacaaaaaaaatccagaataaagcataaaaagctatagaacatgaactataaaaacaaacacagagcaaaaaacagagcactaactcgaaaacaga
29517500
=
-
<-
--
--------->
ATHB12
--
--------->
ICU4
---
--------->
LBD16
---
<---------
LBD16
---
<---------
ARR14(2)
===
--------->
ARR14(2)
>>>
<-----------------
AGL1
---
----------------->
AGL1
---
<---------
PCF2
--------->
YAB1
---
<----------
DOF2
<---------
ARR14(2)
----
------>
NtERF2
--------->
ARR14(2)
<-------
TEIL
----
--------->
LBD16
--------->
TCP20
<---------
YAB1
------
--------->
LBD16
--------->
PCF5
<---------
ICU4
------
--------->
TOE2(3)
--------->
TCP11(2)
<---------
ANAC58
======
--------->
TOE1(3)
--------->
TCP16(1)
<---------
ANAC58
-------
----->
ZAT14
<---------
LBD16
<---------
TCP16(2)
<---------
ICU4
-----------
------
ZAT14
<---------
LBD16
<---------
ZAT18
--------->
ICU4
--------->
ANAC58
------
ZAT18
---------->
DOF2
--------->
ZAT18
<---------
ATHB12
--------->
ANAC58
gcacttaaaaac
ctgaaagttcccgggcttttgagaagacttggaaatagtggacccgaaccggaatcatgattagcgttcatcaacaagtactcaaccc
29517600
--------->
TGA2(2)
<-----------
HVH21
<-----------
TGA1
--------->
bZIP60(1)
<---------
TGA1a
--------->
O2
--------->
TGA1a
<---------
bZIP60(1)
--------->
ANAC58
--------->
ANAC58
--------->
bZIP60(2)
--------->
ANAC55(1)
--------->
ANAC46
<---------
O2
<-----------
STF1
<---------
ALFIN1
============
MYC_MYB
------>
GAMYB
--------
MYB55(2)
------->
DEAR3(2)
------->
MYB46(3)
--->
MYB46(1)
------>
ANAC58
------>
ANAC58
============
MYC_MYB
>>>>>>
MYB98
------>
ANAC46
----->
P
--------->
LBD16
--->
MYB83
--------->
ANAC55(2)
--------->
O2
-->
MYB46(1)
--------->
YAB1
<---------
ARR14(2)
<---------
O2
<---------
WRKY38(1)
-->
MYB83
<---------
ATHB12
<---------
ANAC46
<---------
O2
--->
MYB46(3)
------>
MYB46(1)
--------->
ARR14(2)
<---------
TGA1a
<---------
TGA1a
->
GAMYB
--------->
AtMYB61
<---------
CCA1(2)
----------->
HVH21
<---------
ANAC58
============
MYC_MYB
------>
MYB83
--------->
ANAC46
--------->
TOE2(2)
<---------
ANAC46
-->
ANAC46
<---------
ETT(1)
<---------
LBD16
--------->
TOE1(2)
<---------
ANAC58
------------>
TaNAC69(2)
<-----------
GT1
----------->
RAV1(2)
----------->
HVH21
aacccacgtcaccattccgaccaatcttactgttcccgtatccgaagggataacctgcgacttgggttttctctgacttgggcaacgagaagaaatcgac
29517700
--------->
ATHB12
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
---------->
DOF2
--------->
ARR14(2)
<---------
ARR14(2)
--------->
HSFB2a(2)
--------->
LBD16
<---------
HSFB2a(2)
<---------
LBD16
<--------
P
--
<---------
ANAC58
<---------
At4g35610
---------
<---------
ANAC58
--------->
At4g35610
<---------
O2
<--
<---------
ANAC46
---------->
CDC5
<---------
MYB46(3)
<----------
DOF2
<--
ggtctcgtgttctaaaacagagactagctctgcggaaacgccatggttgatcaccttgaagaagccgaagtcttcgcatgctttcacgagggcatgtttg
29517800
<---------
ARR11(3)
<---------
GLK1(2)
<---------
ANAC58
--------->
ARR11(3)
--------->
ARR14(2)
<---------
ANAC58
<-----------
HVH21
<---------
ARR14(2)
--------->
ARR11(3)
------->
GLK1(2)
--------->
LBD16
--------->
LBD16
<---------
AHL20(1)
>
ATHB12
<---------
CCA1(2)
--------->
GLK1(2)
--------->
AHL20(1)
-------
GLK1(2)
<---------
LBD16
<---------
LBD16
--------->
MYB52(1)
<---------
ARR11(3)
-------
ARR14(2)
<---------
LBD16
<---------
ARR14(2)
-------->
P
------>
NtERF2
<-----------
GT1
gattctgggtcagacatatctataaccgggattagagagaacccggattttggtattgctaccggtttagacaataccgccat
tgatatatttccttgtt
29517900
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
AGP1
<---------
ARR14(3)
--------->
ARR14(2)
--------->
ARR11(3)
--------->
ARR14(3)
<---------
ANAC46
<---------
ARR11(3)
<------
ZmHOX2a(1)
<---------
ARR14(2)
<---------
LBD16
--------->
RVE1(1)
------->
TEIL
<-----------
TBP
---------->
DOF2
<---------
YAB1
--------->
ANAC55(2)
--------->
At4g35610
<---------
AHL20(2)
--------->
MYB59
----------->
GT1
<---------
YAB1
<---------
GLK1(2)
<----------
DOF2
*
TSS
<---------
ANAC55(2)
<---------
At4g35610
-
tgatagaatttttttgattttgatagctttgaaggctgagacat
tgggttatgtactcggaggagtgtatatatagcagatgagatgataaagatcttac
29518000
--------->
YAB1
------->
TEIL
--------->
ARR11(3)
<------
ZmHOX2a(2)
<---------------
AGL15
--------->
AHL20(1)
--------->
SPL7
--------------->
AGL15
<---------
AHL20(2)
<---------
TOE1(2)
---------->
ID1
--------->
YAB1
<---------
LBD16
<---------
SPL7
<-----------
GT1
--------->
AHL20(2)
<-------
--------->
TOE1(2)
<---------
ANAC55(2)
<---------
CCA1(2)
<---------
ARR11(3)
<---------------
AtSPL3
--------->
ANAC55(2)
--------->
ANAC55(2)
--------->
AHL20(2)
--------------->
AtSPL8
<---------
ATHB12
<----------
DOF2
<---------
AHL20(1)
--------
------>
GAMYB
---------->
DOF2
<---------
AHL20(2)
<---------
AHL20(2)
--------->
SPL7
aacgacgtacgatcaaaactgttcaaaactaaagctaatcacttatttttttctcttttatgtatctatatcaataaaattgaatatatcgggacgatat
29518100
---
---
----
---------
<---------
YAB1
>>>>>>>>>>>>>>>>>
LFY
<---------
ICU4
--------->
ANAC58
--------->
YAB1
--------->
ANAC58
--------->
ICU4
---------->
DOF2
<---------
AHL20(2)
----------->
GT1
--------->
AHL20(2)
--
ARR11(3)
----------->
GT1
--------->
AHL20(2)
<---------
AHL20(2)
->
ARR11(3)
<---------
YAB1
----------->
GT1
--------->
ETT(2)
<---------
YAB1
ttgcgaaagcctccattgtgattagttatttgctaaatagtaaaaaaatcgtttaaaatggtttgtcaacagttttttgtttttgttttaattatcatgg
29518200
--------->
ATHB12
------>
ANAC58
<---------------
AtSPL8
------>
ANAC58
<-------
GAMYB
---------->
DOF2
----------->
GT1
--->
TEIL
<------
MYB46(1)
<-------
TEIL
<---------
AHL20(2)
<
>
YAB1
<------
MYB83
---------->
DOF2
--------->
AHL20(2)
<------
ZmHOX2a(1)
acgtcaatgtttggtttttggggttaaagtacagaagtcaaatttaaagaagaattatcgagataaaacatacaatatttgagagcgataggaatttgat
29518300
<---------
ICU4
----------->
RAV1(1)
--------->
ATHB51
--------->
At4g35610
<---------
ZAT18
--------->
ATHB12
<---------
At4g35610
--------->
ZAT18
<---------
YAB1
<---------
MYB46(3)
<---------
ANAC46
<---------
ICU4
<-------
GAMYB
<---------
ICU4
<---------
YAB1
--------->
YAB1
--------->
MYB52(2)
<---------
ANAC58
--------->
ICU4
<---------
YAB1
--------->
MYB55(2)
<---------
ANAC55(2)
------>
ZmHOX2a(1)
<---------
MYB46(3)
<---------
ANAC58
--------->
YAB1
--------->
ARR14(2)
--------->
MYB111(2)
--------->
ANAC55(2)
<---------
ICU4
<----------
DOF2
<-----------
RAV1(1)
<---------
ICU4
<-----------
GT1
<---------
ARR14(2)
<------
------------>
MYB.PH3(2)
--------------->
AtSPL3
--------->
AHL20(2)
<---------
YAB1
-------
---------
AHL20(2)
----------->
HVH21
--------------->
AtSPL8
<---------
AHL20(2)
<---------
AHL20(2)
attttatgggagtttgttggctgacaacataatcactagttgcgtactagttttccctcataatttataagtatccttttttttattattattgctgatt
29518400
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AGI:
At1g78440.1
Description:
ATGA2OX1 (GIBBERELLIN 2-OXIDASE 1); gibberellin 2-beta-dioxygenase. Identical to Gibberellin 2-beta-dioxygenase 1 (GA2OX1) [Arabidopsis Thaliana] (GB:Q8LEA2;GB:Q9XFR8); similar to ATGA2OX2, gibberellin 2-beta-dioxygenase [Arabidopsis thaliana] (TAIR:AT1G30040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60925.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283)
Range:
from: 29516492
to: 29517944
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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