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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
--------->
AHL20(2)
--------->
GLK1(2)
<-
--------->
YAB1
--------->
YAB1
<---------
ARR11(3)
<------
<---------
ICU4
<--------
HAHB4
--------->
YAB1
<------
--------->
ICU4
<---------
ICU4
<-------
TEIL
<---------
XXXXXXXXXXXXXXXXXXXX>
MIR824
<---------
YAB1
<---------
MYB46(3)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ANAC46
----------->
GT1
--------->
AHL20(1)
-------
AHL20(2)
--------->
ICU4
--------->
AHL20(2)
<---------
DEAR3(1)
--------->
AHL20(2)
------>
AHL20(2)
<---------
YAB1
--------->
ICU4
<---------
ZAT14
<---------
AHL20(2)
-->
AHL20(2)
<---------
ATHB12
--------->
ANAC58
<---------
ZAT18
<---------
AHL20(1)
---
AHL20(2)
<---------
ATHB51
--------->
ANAC58
--------->
ZAT18
--------->
AHL20(2)
ttaaaaatatagaccaattatgaaaagattaaacgcattattataaaatcagatagtgcggttcataatctttcaacatggatgaaattaattttacttt
29378400
<---------
TOE2(3)
<---------
TOE1(3)
<----------
DOF2
<---------
At4g35610
<---------
DAG2
--------->
LBD16
------->
TEIL
--------->
At4g35610
------->
GAMYB
--------
LBD16
--------->
ANAC46
----------->
GT1
---
DAG2
--------->
ZAT14
<xxxxxxxxxxxxxxxxxxxx
smallRNA(le3)
<---------
WOX13(1)
----
DOF2
<-------
MYC3
--------->
MYB46(3)
<---------
ARR14(2)
------
--
GT1
<-------
TEIL
------->
MYC3
<---------
MYB52(2)
<-----------
GT1
<-----------
GT1
<-
ttccgctaaggttcgagtttaacacatgtctgtctactccaacgaactttttttttttttttttttttctgtatatatggttttaaccgattgactcctt
29378500
<---------------
AtSPL8
----------->
GT1
--------------->
AtSPL8
<---------
O2
-------->
ATHB1
--------->
ANAC58
<-----------
GT1
<---------
ICU4
<---------
ANAC55(2)
<---------
AHL20(2)
--------->
ATHB51
--------->
ANAC58
---
>
ZmHOX2a(1)
--------->
ICU4
--------->
At4g35610
<--
----------
GT1
<---------
YAB1
<---------
At4g35610
---
ataacatttttttttccgatgttctaaatttccattattgtactctatacatttcatttacattgagacatcagacacgtagaaaaaacatgcttaaaaa
29378600
<-
----
<---
----
<----
----------->
GT1
<----
----------->
GT1
--------
<---------
ATHB12
---------
------>
ZmHOX2a(2)
<-------
TEIL
---------
<------
ZmHOX2a(2)
--------->
DAG2
--------->
MYB46(3)
>>>>>>>>>>>>>>>>>
LFY
--------->
DAG2
--------->
ATERF1(1)
<-----------
GT1
<<<<<<<<<<<<<<<<<
LFY
---------->
DOF2
<---------
ATERF1(1)
------>
TOE2(3)
--------->
ARR14(2)
---------->
DOF2
----------------->
AGL1
------>
NtERF2
-------
MYB59
<---------
ARR14(2)
---------->
DOF2
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
------>
TOE1(3)
<---------
TOE1(2)
--------->
AHL20(2)
<-----------
RAV1(1)
--------->
PCF2
cctaaataactaattttccaaggatccaatggagagtgaaaataaaaagagagaaagagaggcataatgtggccaaaaaggtacagagggagccaccaat
29378700
--------
WOX13(1)
----->
ATHB12
*
TSS
<---------
DAG2
-----
ATHB1
------>
ZmHOX2a(1)
----->
YAB1
<----------
DOF2
------>
ZmHOX2a(1)
-----
YAB1
<------------------------
ANAC81
--------->
ARR14(2)
-----
ATHB12
------>
ZmHOX2a(1)
--------->
REM1(1)
<---------
ALFIN1
->
AtMYB61
<-----------
GT1
------>
ZmHOX2a(1)
<---------
ARR14(2)
>
MYB46(3)
---------->
ID1
----------->
TBP
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
--->
CBF
<-----------
GT1
---------->
ID1
<---------
YAB1
------>
ZmHOX2a(1)
<---------
ALFIN1
gatagatgaagttttttcctatttcttttgtcttctcttccttcttcttataaattcctctactcctccttcaccatttcc
tcctcctcaccttctctct
29378800
--------->
GLK1(1)
<---------
GLK1(1)
<------
ZmHOX2a(1)
--------->
ANAC58
<---------
GLK1(2)
--------->
ANAC58
-------->
P
<---------
ETT(1)
<---------
YAB1
--------->
ANAC46
--------->
GLK1(2)
----------->
HVH21
<----------
DOF2
--------->
ARR14(2)
--------->
ARR14(2)
-
<---------
ARR11(3)
<---------
ARR14(2)
<---------
ARR14(2)
<---------
TOE1(2)
ctcaacatctctctctttctctgtcttctctctgtctcaacgagaat
atgactaaccagaatgtcatcgtttccgacaggaaacccatcttgggtttgaa
29378900
<
-
-
--
--
--
--
--
--
<-
---
---
----
<---
----
--------->
TOE1(3)
<---
<----------
DOF2
----------
<---------
ANAC58
<---------
HSFB2a(2)
--------->
ZAT14
--------->
TOE2(3)
<---------
ARR11(3)
<------
------>
ZmHOX2a(1)
<----------
DOF2
---------->
DOF2
--------->
HSFB2a(2)
-------->
AtMYB61
--------->
ZAT6
<---------
ANAC58
<-----------
GT1
--------->
ARR11(3)
-------
aaccatcactgtctctgtctctaactctcctctgttctctaattcctttcccacttactttaacttccctcgtcgaaagctcttgaaacttcttgaagca
29379000
------>
ZmHOX2a(2)
===============
HOX2a_HOX2a
<------
ZmHOX2a(2)
================
HOX2a_HOX2a
<---------
ARR14(2)
<---------
ARR11(3)
---------
RAP2.6(3)
--------->
AGP1
---------->
RAV1(1)
--------->
ARR11(3)
----->
NtERF2
--------->
ARR14(2)
------->
At1g77200
<---------
GLK1(2)
----->
GAMYB
--------->
ANAC58
------->
DREB2C(2)
--------->
ANAC55(1)
------->
RAP2.6(2)
--------->
ANAC55(2)
------->
RAP2.3(3)
--------->
ANAC46
------->
DEAR3(1)
<---------
O2
--------
ETT(1)
--------->
O2
------>
RAP2.3(1)
<---------
ANAC58
--------->
TGA1a
------>
DEAR3(2)
<---------
ANAC55(1)
<---------
ANAC55(2)
<---------
At4g35610
----->
ZAT2
<---------
ANAC55(2)
<---------
ANAC58
<---------
TGA1a
------
ATERF1(1)
<---------
ANAC46
<---------
ANAC46
--------->
ANAC58
----->
At4g35610
<---------
ANAC58
<---------
ANAC58
<---------
ALFIN1
------
At4g35610
<---------
ICU4
<---------
ANAC58
<---------
REM1(2)
>
DOF2
<---------
ATHB12
<---------
ANAC58
<---------
ALFIN1
------>
ZmHOX2a(1)
---
At4g35610
<-----------
RAV1(1)
------>
ZmHOX2a(2)
--------->
ANAC46
------>
ZmHOX2a(1)
-->
At4g35610
<---------
MYB46(3)
<---------
YAB1
--------->
ANAC55(2)
----------->
ARR10
gccgacaaaaacaacttagttgttgctccaaagattacgtctatgatcgattccatgcgtgattcttcccctacacgtctcagatcctcttcctatgact
29379100
<---------------
AtSPL3
--------->
TOE1(3)
----------->
GT1
--------->
TOE2(3)
----------->
GT1
--------->
SPL7
<---------
TOE2(2)
--------->
TOE1(3)
<---------
TOE1(2)
--------->
TOE2(3)
<---------
SPL7
------->
TEIL
--------->
AHL20(1)
--------->
ARR11(3)
--------------->
AtSPL3
<---------
At4g35610
<---------
ARR11(3)
--------------->
AtSPL8
<----------
DOF2
--------->
GLK1(2)
------>
NtERF2
--------->
TOE1(2)
<---------
TOE1(2)
<-----------
GT1
<---------
GLK1(2)
<----------
ID1
------>
ZmHOX2a(2)
--------->
SPL7
--------->
AHL20(2)
<---------
ARR14(3)
--------->
MYB52(1)
<---------------
AtSPL8
<---------
AHL20(2)
<---------
GLK1(2)
<---------
DOF5.7(2)
--------------->
AtSPL8
<---------
AHL20(2)
--------->
ARR11(3)
--------->
At4g35610
<---------------
AtSPL3
--------->
AHL20(2)
--------->
ARR14(3)
<---------
At4g35610
--------------->
AtSPL3
--------->
TOE2(3)
<---------
ARR11(3)
ctgtttcagataacgacgacaaaacatcttggatc
gtacgttaaatattcgtaccttaaatctaaattaattaacccttttcaagattttggaatctgat
29379200
--------->
MYB59
---
<---------
TOE1(3)
<-----
<---------
TOE2(3)
---------->
DOF2
<-----
<---------
ANAC58
--------->
AHL20(2)
----------->
HVH21
--------->
ICU4
<---------
ANAC46
--------->
MYB52(2)
<---------
YAB1
--------->
TOE1(2)
<---------
YAB1
<---------
ANAC58
<-------
TEIL
<----------
DOF2
<---------
YAB1
<---------
GLK1(2)
catatatgtcttgttttgtttag
gttcgttttccttcggctttaaatatgtttgatgagattgtgaatgctgcgaaagggaaacagattgtcatgtttct
29379300
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AGI:
At1g78090.1
Description:
ATTPPB (TREHALOSE-6-PHOSPHATE PHOSPHATASE). similar to trehalose-6-phosphate phosphatase, putative [Arabidopsis thaliana] (TAIR:AT1G35910.1); similar to unknown [Populus trichocarpa] (GB:ABK94249.1); contains InterPro domain HAD-superfamily hydrolase, subfamily IIB; (InterPro:IPR006379); contains InterPro domain Trehalose-phosphatase; (InterPro:IPR003337)
Range:
from: 29378782
to: 29381397
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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