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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
TOE1(3)
<---------------------
WRI1
--------->
TOE2(3)
<---------
AHL20(2)
--------->
TOE2(3)
------>
NtERF2
--------->
YAB1
--------->
AHL20(2)
----------->
GT1
<---------
RAP2.6(2)
<----------
DOF2
<---------
YAB1
--------->
ATHB51
<---------
ANAC46
------>
ZmHOX2a(2)
<-----
---------
YAB1
<---------
ICU4
--------->
RAP2.6(3)
<---------
ARR11(3)
------
------>
GT1
<---------
YAB1
--------->
MYB52(1)
--------->
ARR11(3)
-------
--->
DAG2
--------->
ICU4
----------->
HVH21
<---------
ATHB12
<----------
DOF2
--->
DOF2
--------->
YAB1
---------->
DOF2
--------->
WOX13(1)
--------->
TOE1(3)
gtataattaatgacactcataattgtatcgttaagacttgaaagtgacggccaagaatacaattaagagccaattagtgatctttcataactttaaaaat
28979900
--------->
ANAC46
--------->
LBD16
--------->
ANAC58
---------->
DOF2
--------->
ANAC58
----------->
GT1
<---------
YAB1
------->
GAMYB
---------->
DOF2
<---------
YAB1
--------->
DEAR3(1)
----
ARR11(3)
--------->
ZAT6
--------->
MYB46(3)
--->
ARR11(3)
--------->
YAB1
--------->
DEAR3(2)
<---
-->
RVE1(1)
--------->
AHL20(2)
--------->
YAB1
<-----------
GT1
---------->
DOF2
ctcacaaaagtagaaaaaaaaaattccaacttgatgaccaagaataatactattaaagagctatttaagatgaaaccgcccgaaaccaaaagcattcgat
28980000
-----------
<----------
<---------
ICU4
<-----------
GT1
<--------
HAHB4
-------->
HAHB4
<---------
ANAC58
--------->
ATHB51
<---------
ANAC58
--------->
YAB1
<---------
DEAR3(1)
<---------
ICU4
--------->
ANAC46
<--------
ATHB1
--------------->
AGL15
<---------
YAB1
<---------------
AGL15
----------->
HVH21
<---------
ATHB51
=========================================================================================
--------->
SPL7
<---------
ALFIN1
--------->
AHL20(2)
--------->
ZAT18
<---------
ALFIN1
--------->
ICU4
<---------
ZAT14
--------->
REM1(1)
--------->
AHL20(2)
--------->
ICU4
<-------
TEIL
----------->
RAV1(1)
<---------
AHL20(2)
--------->
YAB1
------
MYB46(3)
<----------
DOF2
<---------
ANAC46
--------->
AHL20(2)
<---------
YAB1
----
gggtacaccgattactgcttttagcaacaccacggcgtgaccatcaagactaattaactaagaccacattttaaaaaaactattaataattactacaatt
28980100
--------->
ALFIN1
------->
MYC3
<-------
MYC4
------->
PIF5
------->
MYC4
<-------
PIF5
--------->
O2
--------->
PIF3(3)
<---------
O2
---------->
DOF2
--------->
TGA1a
--------->
O2
<---------
TGA1a
------->
GAMYB
<---------
ARR11(3)
<-------
MYC2
--------->
ANAC58
--------->
ARR11(3)
------->
MYC2
--------->
ANAC58
--------->
ANAC58
---------->
DOF2
<---------
PIF3(3)
--------->
ANAC46
<---------
HSFB2a(2)
--------->
ANAC58
===============================
bZIP_DOF
--------->
ANAC58
--------->
HSFB2a(2)
--------->
ANAC58
--------->
AHL20(2)
<<<<<<<<<<
HY5
--------->
ANAC46
<---------
ANAC58
--------->
ANAC46
<---------
AHL20(2)
========================================
bZIP_DOF
--------->
ANAC58
---->
AGL15
<---------
ANAC46
>>>>>>>>>
MYB2
<---------
ANAC58
<---------
ARR14(2)
-----
AGL15
<------
ZmHOX2a(2)
<-------
MYC3
--------->
ANAC58
<---------
HSFB2a(1)
--------->
ARR14(2)
=====
MADS_MADS
============================
MYC_MYB
--------->
HSFB2a(1)
------>
MYB83
------->
GT1
---------------->
PIF3(2)
<---------
O2
<---------
SPL7
------>
MYB46(1)
tgtaattaaaaagatcaacgagaaatgccacgtggacgaatactagcaacgccaagtggaaagagcgttcgagagaacaaggcaaaaccaaatacgcccc
28980200
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ICU4
--------->
ZAT6
--------------->
AtSPL8
<---------
ICU4
<-----------
GT1
<---------
ARR11(3)
----------->
GT1
--------------->
AGL15
--------->
ARR11(3)
--------->
ETT(2)
<---------------
AGL15
<---------
ZAT6
--------->
RVE1(1)
<---------
ETT(2)
------------>
CBF
<---------
AHL20(2)
--------->
CCA1(1)
--------->
DDF1
--------->
ARR11(3)
<---------
AHL20(1)
----------->
GT1
<---------
At4g35610
<---------
ARR11(3)
<---------
ICU4
<---------
MYB46(3)
*
TSS
tagtattctacagatgtcgactggataattacaaaagatttcaataaacagtactaattaatttctagtggtgagtttttgtaaata
tctacttcttcca
28980300
--------->
ZAT14
--------->
ANAC58
--------->
ANAC58
---------->
DOF2
<---------
ARR11(3)
<---------
AHL20(2)
<---------
bZIP60(1)
--------->
ARR11(3)
--------->
AHL20(2)
--------->
bZIP60(1)
XXXXXXXXXXXXXXXXXXXX>
MIR157A-C
--------->
At4g35610
--------->
REM1(1)
--------->
MYB52(1)
<---------
ZAT14
--------->
ZAT2
<-----------
GT1
--------->
ANAC46
<------
ZmHOX2a(2)
<--
<---------
At4g35610
<----------
DOF2
--------->
YAB1
---------->
DOF2
--------->
ARR11(3)
<---------
ZAT2
<------------------------
ANAC81
<---------
MYB52(2)
<---------
ARR11(3)
attaccagctgctatataaatccccttctctgtttctcttttcttacatcacaatcacacaaaactaacaaaagatcaaaagcaagttcttcactgttga
28980400
--------->
KAN4(2)
<---------
KAN4(1)
----------->
HVH21
--------->
LBD16
<---------
LBD16
<---------
MYB46(3)
--------->
MYB52(1)
----------->
GT1
<---------
ALFIN1
------>
ZmHOX2a(2)
--------->
AtMYB61
<---------
AHL20(2)
<---------
MYB55(2)
<---------
TOE2(3)
--------->
ATHB12
<---------
TOE1(3)
--------->
MYB46(3)
--------->
AtLEC2
<---------
YAB1
<---------
TOE2(3)
<---------
ETT(2)
--------->
KAN4(1)
<----------
DOF2
--------->
ATHB12
<-------
GAMYB
-------
ICU4
<---------
GLK1(2)
<----------
DOF2
--------->
AHL20(2)
<-----------
RAV1(1)
ta
atgtctaccaccggacagattattcgatgcaaag
gttttctttttattctgtctttttccaaatatttattgatcggttacatttctgttgaggtttt
28980500
<---------
At4g35610
--------->
ZAT2
<-------
GAMYB
<---------
AtMYB61
<-----------
RAV1(1)
<---------
ANAC58
<-----------
RAV1(1)
<---------
ANAC46
<---------
ANAC46
--------->
At4g35610
--------->
ANAC58
<---------
ANAC58
<---------
At4g35610
--------->
ANAC58
<<<<<<<<<
GATA-4
<---------
ANAC58
--------->
ZAT2
---------->
DOF2
<<<<<<<<<
GATA-2
---------->
ID1
<---------
MYB46(3)
--------->
LBD16
<<<<<<<<<
GATA-1
--------->
TOE2(2)
--------->
MYB55(2)
--------->
RAP2.6(2)
<<<<<<<<<
GATA-3
=============================
RAV
<-----------
RAV1(1)
--------->
GLK1(1)
------->
TEIL
===========================
RAV
--------->
At4g35610
<------
NtERF2
--------->
ARR14(2)
----------->
RAV1(2)
<---------
AtMYB61
<---------
ANAC58
<---------
YAB1
<-----------
GT1
<---------
MYB52(1)
<---------
ZAT2
<---------
LBD16
tgttatgaatccacaatttctatgttgaattaacaaaacctgtgtcgtttttttgtggtggttgcag
ctgctgtggcatgggaagccggaaagccactgg
28980600
--------->
ANAC46
--------->
ANAC58
--------->
GLK1(2)
--------->
DEAR3(1)
--------->
ARR14(1)
<-
----------->
RAV1(1)
<---------
GLK1(2)
<-
<--------
P
--------->
ZAT14
<---------
ARR11(3)
------
<-------
GAMYB
<---------
ARR14(2)
--------->
ARR14(2)
<-----
<---------
MYB46(3)
--------->
ANAC58
<---------
ARR14(2)
-------
<---------
AtMYB61
--------->
ARR14(2)
<---------
YAB1
<---------
ALFIN1
-------
--------->
ALFIN1
--------->
LBD16
<---------
ANAC58
----------->
HVH21
--------->
HSFB2a(2)
<------
ZmHOX2a(1)
--------->
ANAC46
<---------
ANAC58
<-----------
HVH21
<---------
HSFB2a(2)
------>
ZmHOX2a(2)
<---------
ALFIN1
<-------
TEIL
--------->
ZAT14
<---------
LBD16
tgatcgaggaagtggaggttgctccaccgcagaaacacgaagttcgtatcaagattctcttcacttctctctgtcacaccgatgtttacttctgggaagc
28980700
--------->
YAB1
--------->
ANAC58
--------->
ANAC58
<---------
AHL20(1)
--------->
AHL20(2)
<---------
ZAT6
--------->
ANAC46
<---------
AHL20(2)
<-------
--------
TOE2(3)
--------->
ZAT6
--------->
AHL20(2)
<----------
DOF2
--------
TOE1(3)
<-----------
GT1
<---------
AHL20(2)
--------->
TOE2(3)
--->
At4g35610
--------->
AHL20(2)
<---------
AHL20(1)
<---------
DAG2
----
At4g35610
<---------
AHL20(2)
<---------
ARR11(3)
<---------
YAB1
<-----------
GT1
-->
ANAC58
--------->
AHL20(1)
<---------
ICU4
--------->
AHL20(2)
<---------
AHL20(2)
-->
ANAC58
<---------
ATHB12
<-------
TEIL
<---------
AHL20(2)
--------->
AHL20(2)
taag
gtagagtaatcaatttattacactccaaattcataatcaagttctaatttttttagaattctaattttttatctaaaaaaattcaacctttttgat
28980800
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AGI:
At1g77120.1
Description:
ADH1 (ALCOHOL DEHYDROGENASE 1). Identical to Alcohol dehydrogenase class-P (ADH1) [Arabidopsis Thaliana] (GB:Q9CAZ2;GB:Q9CAZ3); similar to ADH2 (ALCOHOL DEHYDROGENASE 2), formaldehyde dehydrogenase (glutathione) [Arabidopsis thaliana] (TAIR:AT5G43940.1); similar to alcohol dehydrogenase [Arabis glabra] (GB:AAF23537.1); similar to alcohol dehydrogenase [Arabidopsis halleri subsp. gemmifera] (GB:BAA22973.1); similar to alcohol dehydrogenase [Arabidopsis halleri subsp. gemmifera] (GB:BAA22978.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contain
Range:
from: 28980288
to: 28982311
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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