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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                         --------->TOE1(3)   <---------------------WRI1                --------->TOE2(3)
   <---------AHL20(2)    --------->TOE2(3)  ------>NtERF2                        --------->YAB1
   --------->AHL20(2)   ----------->GT1    <---------RAP2.6(2)                <----------DOF2
  <---------YAB1--------->ATHB51           <---------ANAC46                  ------>ZmHOX2a(2)<-----
---------YAB1   <---------ICU4            --------->RAP2.6(3)              <---------ARR11(3) ------
------>GT1     <---------YAB1            --------->MYB52(1)                --------->ARR11(3)-------
--->DAG2       --------->ICU4           ----------->HVH21            <---------ATHB12  <----------DOF2
--->DOF2     --------->YAB1         ---------->DOF2                --------->WOX13(1)  --------->TOE1(3)
 
gtataattaatgacactcataattgtatcgttaagacttgaaagtgacggccaagaatacaattaagagccaattagtgatctttcataactttaaaaat  28979900
                                                                            --------->ANAC46
                                                                            --------->LBD16
                                                                            --------->ANAC58
                                                  ---------->DOF2           --------->ANAC58
       ----------->GT1                          <---------YAB1          ------->GAMYB
  ---------->DOF2                            <---------YAB1             --------->DEAR3(1)
----ARR11(3)                               --------->ZAT6              --------->MYB46(3)
--->ARR11(3)                             --------->YAB1                --------->DEAR3(2)       <---
-->RVE1(1)     --------->AHL20(2)     --------->YAB1                 <-----------GT1---------->DOF2
 
ctcacaaaagtagaaaaaaaaaattccaacttgatgaccaagaataatactattaaagagctatttaagatgaaaccgcccgaaaccaaaagcattcgat  28980000
                                                                                         -----------
                                                                                         <----------
                                                                                      <---------ICU4
                                                                                      <-----------GT1
                                                                                   <--------HAHB4
                                                                                   -------->HAHB4
                               <---------ANAC58                                    --------->ATHB51
                               <---------ANAC58                                    --------->YAB1
                            <---------DEAR3(1)                                     <---------ICU4
                            --------->ANAC46                                       <--------ATHB1
           --------------->AGL15                                                  <---------YAB1
           <---------------AGL15 ----------->HVH21                                <---------ATHB51
           =========================================================================================
--------->SPL7            <---------ALFIN1                                        --------->AHL20(2)
--------->ZAT18        <---------ALFIN1                                           --------->ICU4
<---------ZAT14        --------->REM1(1)                          --------->AHL20(2) --------->ICU4
<-------TEIL         ----------->RAV1(1)          <---------AHL20(2)            --------->YAB1
------MYB46(3)<----------DOF2  <---------ANAC46   --------->AHL20(2)          <---------YAB1    ----
 
gggtacaccgattactgcttttagcaacaccacggcgtgaccatcaagactaattaactaagaccacattttaaaaaaactattaataattactacaatt  28980100
                            --------->ALFIN1
                           ------->MYC3
                           <-------MYC4
                           ------->PIF5
                           ------->MYC4
                           <-------PIF5
                          --------->O2
                          --------->PIF3(3)
                          <---------O2                 ---------->DOF2
                          --------->TGA1a         --------->O2
                          <---------TGA1a     ------->GAMYB
         <---------ARR11(3)<-------MYC2      --------->ANAC58
         --------->ARR11(3)------->MYC2 --------->ANAC58                   --------->ANAC58
     ---------->DOF2      <---------PIF3(3)  --------->ANAC46     <---------HSFB2a(2)     --------->ANAC58
     ===============================bZIP_DOF --------->ANAC58     --------->HSFB2a(2)     --------->ANAC58
  --------->AHL20(2)      <<<<<<<<<<HY5 --------->ANAC46     <---------ANAC58             --------->ANAC46
  <---------AHL20(2)      ========================================bZIP_DOF --------->ANAC58
---->AGL15                <---------ANAC46  >>>>>>>>>MYB2    <---------ANAC58          <---------ARR14(2)
-----AGL15<------ZmHOX2a(2)<-------MYC3 --------->ANAC58     <---------HSFB2a(1)       --------->ARR14(2)
=====MADS_MADS            ============================MYC_MYB--------->HSFB2a(1)      ------>MYB83
------->GT1            ---------------->PIF3(2)   <---------O2<---------SPL7          ------>MYB46(1)
 
tgtaattaaaaagatcaacgagaaatgccacgtggacgaatactagcaacgccaagtggaaagagcgttcgagagaacaaggcaaaaccaaatacgcccc  28980200
                                                       <---------AHL20(2)
                                                      --------->AHL20(2)
                                                  --------->ICU4
                                            --------->ZAT6
                                            --------------->AtSPL8
                      <---------ICU4      <-----------GT1                         <---------ARR11(3)
                  ----------->GT1     --------------->AGL15                       --------->ARR11(3)
             --------->ETT(2)         <---------------AGL15     <---------ZAT6   --------->RVE1(1)
             <---------ETT(2)       ------------>CBF  <---------AHL20(2)         --------->CCA1(1)
            --------->DDF1       --------->ARR11(3)   <---------AHL20(1)   ----------->GT1
        <---------At4g35610      <---------ARR11(3)<---------ICU4<---------MYB46(3)    *TSS
 
tagtattctacagatgtcgactggataattacaaaagatttcaataaacagtactaattaatttctagtggtgagtttttgtaaatatctacttcttcca  28980300
                                                                                      --------->ZAT14
                                                                            --------->ANAC58
                                                                            --------->ANAC58
                                                                          ---------->DOF2
                                                                      <---------ARR11(3)
            <---------AHL20(2)            <---------bZIP60(1)         --------->ARR11(3)
            --------->AHL20(2)            --------->bZIP60(1)  XXXXXXXXXXXXXXXXXXXX>MIR157A-C
   --------->At4g35610                    --------->REM1(1)   --------->MYB52(1)      <---------ZAT14
   --------->ZAT2                       <-----------GT1--------->ANAC46<------ZmHOX2a(2)         <--
   <---------At4g35610            <----------DOF2  --------->YAB1 ---------->DOF2 --------->ARR11(3)
   <---------ZAT2          <------------------------ANAC81  <---------MYB52(2)    <---------ARR11(3)
 
attaccagctgctatataaatccccttctctgtttctcttttcttacatcacaatcacacaaaactaacaaaagatcaaaagcaagttcttcactgttga  28980400
                   --------->KAN4(2)
                  <---------KAN4(1)
          ----------->HVH21
          --------->LBD16
        <---------LBD16                                                  <---------MYB46(3)
       --------->MYB52(1)                                                ----------->GT1
      <---------ALFIN1                                                  ------>ZmHOX2a(2)
      --------->AtMYB61                                          <---------AHL20(2)
     <---------MYB55(2)       <---------TOE2(3)                  --------->ATHB12        <---------TOE1(3)
     --------->MYB46(3)  --------->AtLEC2                       <---------YAB1           <---------TOE2(3)
  <---------ETT(2)--------->KAN4(1)                <----------DOF2   --------->ATHB12<-------GAMYB
-------ICU4     <---------GLK1(2)     <----------DOF2        --------->AHL20(2)     <-----------RAV1(1)
 
taatgtctaccaccggacagattattcgatgcaaaggttttctttttattctgtctttttccaaatatttattgatcggttacatttctgttgaggtttt  28980500
                                                                 <---------At4g35610
                                                                 --------->ZAT2
                                                        <-------GAMYB
                                                   <---------AtMYB61
                                                   <-----------RAV1(1)  <---------ANAC58
                                                 <-----------RAV1(1)    <---------ANAC46
                                         <---------ANAC46     --------->At4g35610      --------->ANAC58
                                         <---------ANAC58     <---------At4g35610      --------->ANAC58
     <<<<<<<<<GATA-4                     <---------ANAC58     --------->ZAT2         ---------->DOF2
     <<<<<<<<<GATA-2                    ---------->ID1 <---------MYB46(3)          --------->LBD16
     <<<<<<<<<GATA-1               --------->TOE2(2)   --------->MYB55(2)         --------->RAP2.6(2)
     <<<<<<<<<GATA-3              =============================RAV <-----------RAV1(1)--------->GLK1(1)
    ------->TEIL                  ===========================RAV --------->At4g35610<------NtERF2
    --------->ARR14(2)            ----------->RAV1(2) <---------AtMYB61 <---------ANAC58
 <---------YAB1            <-----------GT1 <---------MYB52(1) <---------ZAT2     <---------LBD16
 
tgttatgaatccacaatttctatgttgaattaacaaaacctgtgtcgtttttttgtggtggttgcagctgctgtggcatgggaagccggaaagccactgg  28980600
                                 --------->ANAC46
                                 --------->ANAC58 --------->GLK1(2)
                       --------->DEAR3(1)         --------->ARR14(1)                              <-
                       ----------->RAV1(1)       <---------GLK1(2)                                <-
              <--------P--------->ZAT14          <---------ARR11(3)                           ------
             <-------GAMYB  <---------ARR14(2)   --------->ARR14(2)                           <-----
            <---------MYB46(3)   --------->ANAC58<---------ARR14(2)                          -------
           <---------AtMYB61--------->ARR14(2) <---------YAB1           <---------ALFIN1     -------
        --------->ALFIN1--------->LBD16 <---------ANAC58             ----------->HVH21  --------->HSFB2a(2)
    <------ZmHOX2a(1) --------->ANAC46  <---------ANAC58            <-----------HVH21   <---------HSFB2a(2)
------>ZmHOX2a(2)   <---------ALFIN1   <-------TEIL          --------->ZAT14           <---------LBD16
 
tgatcgaggaagtggaggttgctccaccgcagaaacacgaagttcgtatcaagattctcttcacttctctctgtcacaccgatgtttacttctgggaagc  28980700
                               --------->YAB1
                      --------->ANAC58
                      --------->ANAC58
              <---------AHL20(1)                                 --------->AHL20(2)
    <---------ZAT6    --------->ANAC46                           <---------AHL20(2)         <-------
--------TOE2(3)     --------->ZAT6               --------->AHL20(2)                     <----------DOF2
--------TOE1(3)   <-----------GT1                <---------AHL20(2)                    --------->TOE2(3)
--->At4g35610 --------->AHL20(2)                <---------AHL20(1)                     <---------DAG2
----At4g35610 <---------AHL20(2)         <---------ARR11(3)  <---------YAB1         <-----------GT1
-->ANAC58     --------->AHL20(1)  <---------ICU4--------->AHL20(2)           <---------AHL20(2)
-->ANAC58<---------ATHB12     <-------TEIL      <---------AHL20(2)           --------->AHL20(2)
 
taaggtagagtaatcaatttattacactccaaattcataatcaagttctaatttttttagaattctaattttttatctaaaaaaattcaacctttttgat  28980800
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AGI:  At1g77120.1   
Description:  ADH1 (ALCOHOL DEHYDROGENASE 1). Identical to Alcohol dehydrogenase class-P (ADH1) [Arabidopsis Thaliana] (GB:Q9CAZ2;GB:Q9CAZ3); similar to ADH2 (ALCOHOL DEHYDROGENASE 2), formaldehyde dehydrogenase (glutathione) [Arabidopsis thaliana] (TAIR:AT5G43940.1); similar to alcohol dehydrogenase [Arabis glabra] (GB:AAF23537.1); similar to alcohol dehydrogenase [Arabidopsis halleri subsp. gemmifera] (GB:BAA22973.1); similar to alcohol dehydrogenase [Arabidopsis halleri subsp. gemmifera] (GB:BAA22978.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contain
Range:  from: 28980288    to: 28982311    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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