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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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<---------AHL20(2)
--------->AHL20(2)
<---------ARR11(3)
--------->AHL20(1)
--------->ARR11(3)
<---------AHL20(1)         --------->ICU4                                                     ------
-------AHL20(2)            <---------YAB1          --------->ANAC58         --------->TOE2(3) ------
------>YAB1           <---------bZIP60(1)          --------->ANAC46      --------->ANAC46     <-----
------>AHL20(2)       --------->bZIP60(1)      --------->YAB1         --------->TOE2(3)     <-------
--->YAB1         ------>ZmHOX2a(1)        ------>MYB83--------->ZAT18 >>>>>>>>>RAP2.2   --------->ZAT14
---AHL20(2)     --------->TOE1(2)         ------>MYB46(1)     <---------AHL20(2)   <---------At5g28300
->AHL20(2)      --------->TOE2(2)       --------->TOE1(2)    --------->AHL20(2)   --------->YAB1
-->AGL15     <---------ARR11(3)   <---------YAB1   --------->ANAC58--------->WOX13(1)   <---------ZAT14
 
taatatattgatacaaaatcctatgaggtcatttttgatgatacctacaattacaagccccctataaaatcaatctaaaccacaattacagtatacaaat  28870000
                        <---------AHL20(2)
     --------->AHL20(2) --------->AHL20(1)
   --------->ANAC58     --------->AHL20(2)
   --------->ANAC58    --------->AHL20(2)                                              --------->MYB52(1)
   ----------->GT1     <---------AHL20(2)                               --------->GLK1(2)
--->ARR11(3)         --------->YAB1                                   --------->HSFC1(2)
--->ARR14(2)    ----------->GT1        <---------LBD16                <---------HSFB2a(1)         --
----ARR14(2)---------->DOF2 <-----------GT1            ----------->GT1<---------HSFC1(2)         ---
--------AGL15 ----------->GT1<---------At5g28300    <------ZmHOX2a(1) --------->HSFB2a(1)     <-----
 
cttggtaagaaaatacaaagtgaaaaataatttaccccaaaactcggaaaatagaggagagagaaatttgagaagattccattttggcacaaacagagga  28870100
                                                                                              ------
                                                                                             -------
                                                                                             <------ZmHOX2a(2)
                                                                                            <-------
                                                                                            --------
                         <---------ANAC55(2)                                                <-------
          ---------->DOF2----------->GT1                                                    <-------
        --------->YAB1  --------->MYB59                 <---------AHL20(2)                  --------
        --------->AHL20(2)                           <---------AHL20(1)                     <-------
     --------------->AGL15                   ---------->DOF2                                <-------
     <---------------AGL15             <---------AHL20(2)  <---------TOE2(3)               <--------
------->DAG2       --------->AHL20(2) --------->AHL20(2)--------->AHL20(2)             --------->ANAC58
------->DOF2     ----------->GT1 ----------->GT1     --------->AHL20(1)                --------->ANAC58
-ZmHOX2a(1)    ---------->DOF2 ---------->DOF2      --------->AHL20(2)           <---------WOX13(1)
 
aaaagtatcaataaaaagaaaagaaaataggtaaaaaagaaataaatcgaaagaaatatataaatgttagaatggctccttgagattgacaagcagatct  28870200
 --------->At4g35610
>ZmHOX2a(2)
-->GLK1(1)
--ARR14(2)
->ARR14(2)                                  <-----------GT1
--AGP1                 ---------->DOF2  <XXXXXXXXXXXXXXXXXXXXMIR781
--ARR11(3)          ----------->GT1   --------->ANAC55(2)
->ARR11(3)         --------->DAG2    <---------TOE2(2)                  <---------ATERF1(1)
----ARR10         ---------->DOF2    --------->MYB59                  ----------->RAV1(2)
--ARR14(3)   --------->AHL20(2)      <---------TOE2(3)           ---------->DOF2       <-----------GT1
-CCA1(2)  --------->YAB1       --------->AHL20(2)          --------->ZAT6  ------>NtERF2           -
 
catcaccagacaaatataaaataaagtaaagaaattaacttaggtatttacaaaactctctaacaccataaaaccctgcgcccagagatttcactcttct  28870300
                                                                                  <---------AHL20(2)
                                                                             <----------DOF2
                                                                         ---------->ID1        <----
                                                                        <-----------GT1        -----
                                                                      <---------AHL20(2)     *TSS
               <----------DOF2                    <-----------GT1 <---------AHL20(2)   <-----------GT1
----->ZmHOX2a(1)             <----------DOF2<---------AHL20(2)   <---------YAB1  <---------AHL20(2)
 
tcctcatgtaaactctctctttctctctctctctttatctctcccattttttttttcttctctaaatttttattttttctcttttttatttttcatttct  28870400
                                                                                                  <-
             ---------->DOF2         ----------->GT1                                              <-
            <---------WRKY12         <----------ID1                                               <-
          --------->LBD16           ------------------------>ANAC81                              <--
          <-----------HVH21        ---------->DOF2                                               ---
         --------->ANAC46   ------------------------>ANAC81                                      <--
-----HSFB2a(2)              ----------->GT1              --------->AHL20(2)                <--------
---->HSFB2a(2)           ----------->GT1         <------ZmHOX2a(1)      <----------DOF2    ---------
 
gtaacttcttctccgtcaaagacacagagagtagaaaaaaaagaaaaacagaggaacagattaaaaaaaaaaaaactttattaaacgatgatgcaactgg  28870500
                                  <-----------TGA1
                         --------->ATERF1(1)
                         <------NtERF2
                         --------->At4g35610
                        <---------DEAR3(2)
                        <---------ERF1
                        ------>NtERF2
                        <---------MYB46(3)
                        <---------RAP2.3(1)
                       <---------ANAC46
                       <---------RAP2.6(2)
                       <---------DEAR3(1)
                       --------->ATERF1(2)
                       --------->DEAR3(1)                       <---------ATHB12
                      --------->DEAR4(2)                   ----------->RAV1(1)
                     <---------DEAR4(2)                  --------->ABI4(1)
                     <---------ATERF1(1)                 ------>NtERF2
                     <---------RAP2.3(1)                --------->ANAC58
            --------->ZAT6        <-----------HVH21     --------->DEAR3(1)
            --------->AtMYB61    --------->ANAC46       --------->RAP2.6(2)
         ------>NtERF2<------NtERF2                     --------->ANAC46
  <---------SPL7    <---------DEAR3(1)                  --------->ANAC58
<---------------AtSPL8--------->RAP2.3(1)               --------->DREB2C(2)                      ---
--------------->AtSPL3--------->ATERF1(1)               --------->DEAR4(1)                       <--
<---------AtMYB61   <---------RAP2.3(2)                 ------->GAMYB                         ------
-----MYB46(1)      <---------At4g35610                 --------->MYB46(3)                 ------->GAMYB
--------MYB46(3)   --------->At4g35610                --------->ABI4(1)                 --------->At4g35610
-----MYB83 --------->MYB46(3)--------->MYB46(3)      <---------ALFIN1                  ----------->RAV1(1)
-------DEAR3(1) ---------->DOF2  ------->GAMYB       --------->AtMYB61                 =============
------>ALFIN1   --------->ZAT14 <------------AtMYB77 --------->DEAR3(1)              <------NtERF2 -
-------AtMYB61  <---------ZAT14 --------->MYB46(3)  <---------ABI4(2)               --------->RAP2.6(2)
-ZAT2   <---------ETT(1)<---------ATERF1(1)         --------->MYB46(3)            --------->At4g35610
>ZAT2   --------->DEAR3(1)   --------->REM1(1) --------->REM1(1)<<<<<<<<<ARR2     <---------At4g35610
 
gtggtggtactccgaccactacagcggcggctacaaccgtcacaactgctacagcaccaccgccacaatcaaacaacaacgattcagcggcaacagaagc  28870600
                                                                                  --------->ANAC58
                                                                               --------->ARR14(2)
                                                                              <------ZmHOX2a(1)
            <------MYB46(1)                                                   ======================
            <------MYB83                                                      ======================
           <---------MYB46(3)                                             <------NtERF2
           --------->ALFIN1                                              ------>NtERF2
          --------->ALFIN1                                               ----------->RAV1(1)
          <---------MYB52(1)                                            <------NtERF2
          <--------P                                                    <---------DEAR3(1)
         <-------GAMYB                                                 --------->ATERF1(1)
        --------->MYB55(2)                                             <---------ATERF1(1)
        <---------MYB46(3)                                             <---------LBD16
      <---------At4g35610                                              <---------At4g35610
      --------->At4g35610                                              <------NtERF2
     ------------>AtMYB77                                              ------>NtERF2
   <---------ZAT2                                                      --------->At4g35610
   <---------At4g35610                                                 --------->LBD16
   --------->ZAT2                                                     <---------RAP2.3(1)
   --------->At4g35610                                                <---------ATERF1(1)
   <------NtERF2            --------->ETT(1)                         <---------RAP2.3(2)
  ----------->RAV1(1)       <---------ANAC46                         <---------DEAR3(1)
 <-----------RAV1(2)       <------NtERF2                             <---------RAP2.6(2)   <--------
<------NtERF2             <-----------HVH21    <---------MYB52(1) --------->WRKY38(1)   <---------ANAC58
--------->At4g35610      --------->ALFIN1--------->ANAC58         --------->WRKY12--------->ANAC58
------>At4g35610      <---------TOE2(3)  --------->ANAC58        <---------MYB52(1)     <---------ANAC58
-------At4g35610<---------ANAC58         ----------->HVH21     --------->ATHB12<---------ARR14(2)
--->At4g35610   <---------ANAC58         --------->ANAC46   <---------GLK1(1)--------->ANAC58      <
=============RAV<---------ANAC46      <-------TEIL          --------->GLK1(1)--------->ANAC58      -
---------->RAV1(1)<-------GAMYB    --------->CCA1(2)      <------ZmHOX2a(1)<-----------RAV1(2)     -
 
agcggcagcagcggttggggcgtttgaggtgtcggaagagatgcacgaccgtgggtttggaggaaatcgttggccgcggcaggaaacgctagcgttgttg  28870700
          <---------bZIP60(2)
          ==========================================bZIP_DOF
          <---------O2
       ----------->HVH21                          <---------MYB52(1)
      ------>ZmHOX2a(2)                  <---------DOF5.7(2)
     <------ZmHOX2a(2)                   ---------->DOF2
    --------->ARR14(2)                 --------->DOF5.7(2)
    <---------ARR14(2)                --------->TOE1(3)
============HOX2a_HOX2a        --------->ANAC58  <---------DAG2
=============HOX2a_HOX2a       --------->ANAC58 ----------------->AGL1
-MYB46(3) <---------TGA1a  --------->HSFB2a(2) <-----------------AGL1                           <---
---------ARR14(2)          <---------HSFB2a(2) ----------------->AGL1                         ------
-------->TOE1(2)     <---------ANAC58 --------->TOE2(3)                 <-------TEIL     <----------DOF2
-------->ARR14(2)    <---------ANAC58<---------ZAT6                 <---------TOE1(2)   <---------DAG2
 
aaaatacgatctgacatgggaatagcgtttcgagacgctagcgttaaaggtcccttatgggaagaggtttctaggttcgcgttttcttctccctttcctc  28870800
           <---------------AGL15
          <-----------------AGL2
          --------------->AGL15                                                            ------->TEIL
          <-----------------AGL1                                                     --------->ICU4
          <-----------------AGL3                                                     <---------YAB1
        ---------->ID1                                                             --------->YAB1
     <---------DAG2                                                                <---------ICU4
     <----------DOF2                                                               --------->ATHB12
    <---------DAG2                                                      <---------YAB1  <---------YAB1
 <-----------GT1                                                      <-----------------AGL1
<-----------GT1                             <------------------------ANAC81       --------->ICU4
-------DOF2<----------DOF2  <----------DOF2<----------DOF2   <---------AHL20(2)   <---------YAB1
>ZmHOX2a(1)--------------->AGL15<-----------GT1 <-----------GT1       ----------------->AGL1
 
tttattcccttttcctttttttggtatacttctttttccactctctctttttttcttctctgaattttttgttttctaattgggaatgattatgaaactt  28870900
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AGI:  At1g76880.1   
Description:  trihelix DNA-binding protein, putative. similar to GT2, transcription factor [Arabidopsis thaliana] (TAIR:AT1G76890.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO43639.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005)
Range:  from: 28870394    to: 28873119    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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