Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                   <-                                                                                                <----                                                                                                -----               ---------->CDC5                                                     <---------ICU4<---         ---------->DOF2                                                           --------->YAB1----   --------->ANAC46    <---------ICU4                                   ---------->DOF2       ------- --------->MYB46(3)    --------->YAB1    ---------->DOF2             <------ZmHOX2a(2)   <----------DOF2   agaacaaacaacaaagcttagcgcatcatgagggcgaactcatcaaagcttagaactccatcagcattgagatcaaaagcttgaatcataactttgcaat  28770300         <---------HSFB2a(2)         >>>>>>>ZML2         --------->HSFB2a(2)                      --------->LBD16    <---------MYB46(3)                           --------->ANAC46 -------->ATHB12                                 --------->LBD16                            <-------- --------YAB1                                   <---------HSFB2a(2)                         --------- -----ATHB12                   --------->YAB1   <---------LBD16                          ---------->DOF2 ---->ICU4               --------->ATHB12       --------->LBD16                        <---------HSFB2a(2) ------ICU4             <-------TEIL            --------->HSFB2a(2)              ------->TEIL ----->YAB1         ------>MYB83           <---------At4g35610                   <-------TEIL -->WOX13(1)        ------>MYB46(1)        --------->ZAT2                    --------------->AtSPL8<-   catcagtggttctagactcaccaagcttcattagcatcatcttcaagctccccggagtaatgcaatcttctccatcagcaatgtacattctaaaagcttc  28770400        ------>ZmHOX2a(1) --------->ARR11(3)                <---------ICU4 <---------ARR11(3)               <---------YAB1 -HSFC1(2)            ------>ZmHOX2a(1)      --------->YAB1       --------->AHL20(2)  --------->DEAR3(1) >HSFC1(2)   <----------DOF2    --------->YAB1    --------->At4g35610      --------->MYB46(3) --------MYB52(1)    --------->TOE2(3)    <----------DOF2         --------->YAB1   <---------ALFIN1 -   cattatcttcctcttcttttcttcctcagtgaattcatcattccctttgataagcagagcaaactcattaatatccaacatcccatcaccgtctatatca  28770500                                                                                     <-----------GT1                                                                                  --------->GLK1(2)            ------>NtERF2                                                        <---------GLK1(2)           --------->DEAR3(1)                                                  ----------->ARR10         --------->At4g35610                                               <---------ZAT14        --------->ANAC46                                                   <---------At4g35610        ------->GAMYB                                                      --------->ZAT14       --------->MYB46(3)                                                  --------->At4g35610      <---------At5g28300                                               --------->At4g35610     <-----------GT1       <---------At4g35610                          ------>ZmHOX2a(1)   --------- ---------->GT1            --------->At4g35610                     <---------At4g35610<---------At5g28300   gagagtttaaccgcagcctcggcttcttcatcagacatttgctctcccaacgtcttaaaactcttcttaagctcctctgcagagattctaccgtctctgt  28770600                                                                                     <---------ZAT14                                                                                  <---------ANAC58                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                             <---------bZIP60(2)                                                                             <---------ANAC46                                                                            <---------TOE2(3)                                                                          ----------->TGA1                                                           ---------->DOF2----------->HVH21          --------->ANAC58                               <---------YAB1   ------->GAMYB          --------->ANAC58                        <---------GLK1(2)      <---------MYB52(2)      --------->AtLEC2                            <---------ICU4       --------->MYB52(1) ------------>WRI1                          ------>ZmHOX2a(1)        <---------ARR11(3)             -   ttgcatccatgtaagcaaacacagcctctaagtctctgttcttctcctctaagaatttcatgaaagatgaagataactgacgttgagtgttcttcatttt  28770700         <------------CBF                                   --------->ARR14(2)                  -----       --------->ICU4                        <----------DOF2<---------ARR14(2)   --------->DAG2 <----     ---------->DOF2                     <----------DOF2   <------ZmHOX2a(1)    ---------->DOF2 <---- --------->DOF2                   <------------CBF       <---------TOE2(3) ----------->GT1    <------   gagaaagaaaagattgtatttgttataagttacaagtattgttctttctttttttgatttaggatttgaatgagaaatggtataaagtgtttctctatat  28770800                                                                          --------->HSFC1(1)                                                                          <---------HSFB2a(2)                                                                          --------->HSFB2a(2)                                                                       <---------ARR14(2)                                                                       <---------ARR11(3)                                                                       --------->ARR11(3)                                                                       --------->AGP1                                                                       <---------AGP1                                                                   <-------TEIL                                                                  --------->GLK1(2)                                                           --------->ALFIN1         <----------ID1      --------->ALFIN1          --------->AHL20(2)        --------->TOE1(2)----------->GT1 ---->AHL20(2)               --------->YAB1               ------->MYC3 --------->ARR14(2)   <-------- -------TBP               --------->YAB1                  <-------MYC3<---------CCA1(2)     <-------- -----AHL20(2)         --------->YAB1                    <---------TGA1a ------>ZmHOX2a(2)  --------- -----TBP              ----------->GT1   <------------CBF--------->TGA1a<------ZmHOX2a(2)   ---------   atataggtgtgtttcaagtcgagaatagtaataagaaaatagaaattgaaacgaatcaaacgtgtgagattcagatctagaaaaaaaaaacaaatatttt  28770900                                                    ----------->GT1                                                  ---------->DOF2                                                 <------ZmHOX2a(1)                <-----------ARR10                                            --------->STY1(2)                     <---------ARR11(3)                                            <---------STY1(2)                     --------->ARR11(3)                                         ===============HOX2a_HOX2a              <---------CCA1(2)                                        ================HOX2a_HOX2a            --------->ANAC55(2)         ------>ZmHOX2a(2)              <------ZmHOX2a(2)                      <---------ANAC55(2)        <------ZmHOX2a(2)              <---------ARR14(2)                   <---------MYB52(1)       <---------AGP1                  --------->ARR14(2)                  <-------GAMYB       <---------ARR11(3)              --------->ARR11(3)                 --------->MYB52(2)       --------->AGP1      <---------YAB1------>ZmHOX2a(2)                <---------MYB46(3)       --------->ARR11(3)<--------HAHB4--------->AGP1                     ----------->GT1  <----------DOF2       <---------YAB1 <---------AGP1----------->GT1  <---------MYB46(3) -ARR11(3)            <---------ZAT6   <---------ARR11(3)          <------------CBF -AHL20(1)--------->HSFB2a(2)       <---------HSFB2a(2)          <---------AHL20(1) >AHL20(1)<---------HSFC1(1)        --------->HSFB2a(2)          --------->ARR11(3) >ARR11(3)<---------HSFB2a(2)       --------->HSFC1(1)   --------->ICU4  <-------TEIL   tagtctttagatctagaagaagtagtattattagtcttctagatctagctaggaaaggaaatattagtatattggttcgttacatatctcatccccatgt  28771000                                                                            <---------AHL20(2)                                                                            <---------AHL20(1)                                                                           --------->YAB1                                                                         <---------AHL20(1)                                                                         --------->AHL20(1)                                                                        --------->YAB1                                                                   --------->At5g28300             <<<<<<<<<TBF1                        ----------->GT1 ----------->GT1----------->HVH21      <-------MYC3                             <------ZmHOX2a(1) <---------TOE2(3)<-----------GT1      ------->MYC3                      <------ZmHOX2a(1)  <---------YAB1--------->AHL20(2)    <-----   ttaaaacacgttttcttcttctacctctctgtcttaaatataggaagaaggattgagaaatgttattgtggtaaatataatatttgacgactcccatttg  28771100                                      <---------DAG2                                      <----------DOF2                                     <---------ANAC58                                     <---------ANAC58                                <---------ICU4                                --------->YAB1                                -------->ATHB1                                --------->ATHB12                               --------->ICU4                       <---------At4g35610                            <---------TOE2(3)             ----------->GT1   <---------YAB1                         <---------TOE1(3)       <<<<<<<<<<<<<<<<<LFY    <---------ATHB12                    --------->TOE2(3)          ------- ----MYB46(3)--------->YAB1  --------->YAB1             <---------ARR11(3)                <-------TEIL   ttgaatttagaacaatggtaacttcatctactaatcattgctttttttcaaaaatcaatttcttcacaacctaaggtttcataccatagaagtccatata  28771200  Previous    Next  AGI:  At1g76640.1    Description:  calmodulin-related protein, putative. similar to CML38, calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G76650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66321.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 28770218    to: 28770697    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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