Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------AHL20(2)                                                --------->ATHB51                                      <---------AHL20(2)    --------->AHL20(2)           <---------AHL20(2)                                    <---------YAB1        --------->AHL20(2)      <---------AHL20(1)                                 <---------YAB1 <---------ICU4                    --------->AHL20(2)                                 --------->AHL20(2)       <---------AHL20(2)      <---------AHL20(2)                      --------->GLK1(1)        <---------ATHB12                --------->ARR14(2)                      <---------GLK1(1)        --------->ICU4                  <---------ARR14(2)            <----------DOF2   --------->AHL20(1)-------->ATHB1              <---------ANAC58 ------->ANAC46 <---------AtLEC2 <---------AHL20(2)   <---------CCA1(2)     --------->ANAC55(2) >GT1     ---------->ID1     --------->YAB1    <---------ATHB51             <---------ANAC58     ----   ctcgaaacccttgtcttttcatggatttcaagtatattattaatatgcaattattcgtatattaatatatgcccctatgcgtattttattttttaatgcg  28710000                                                  <----------DOF2                                              <-----------GT1                                              ---------->ID1             <---------At4g35610      <----------DOF2                  <---------ANAC58      --------->ARR11(3)              <---------DAG2                   <---------ANAC58      <---------ARR11(3)             <---------ANAC58             --------->DAG2     --------->YAB1       --------->ALFIN1   <-----------GT1     ---------->DOF2                   -- ------>DOF2 --------->At4g35610     <---------ANAC58  ------>ZmHOX2a(1)       <-----------HVH21   <-   aaaggaatgatattcagctaaattttcggtgtgtctattgctttttttttccctttcctcgttcaaaaaaagtacttgcagagtcactcactctcagtct  28710100                                                         <-----------HVH21                                                        --------->DEAR3(1)                                                      ------>NtERF2                                                     <---------ALFIN1                                                  --------->ANAC58                                                  --------->ANAC46                        --------->LBD16      <---------ICU4          <---------AHL20(2)                 --------->AHL20(2)         --------->AHL20(2)      <----------DOF2  --------->ANAC58         <---------AHL20(2)  <---------GLK1(1)  <-----------GT1   <-------MYC3   <---------At4g35610        <---------AHL20(2)        --------->GLK1(2)   ------->MYC3   <---------HSFC1(2)        <---------ATHB12           <-----------ARR10   --------->DAG2 ------->At4g35610--------->HSFC1(2)        --------->AHL20(2)        <---------GLK1(2)   ---------->DOF2 --------At4g35610--------->HSFB2a(1)     --------->WOX13(1) <---------ANAC46  ------>ZmHOX2a(1)   cagcacatgaattaatttgaagcttccctagaattctttcacatcaattaatacgacaccgtctcgggtgaagaatctctcctctcttgccctaaagcga  28710200                                                                     --------->MYB46(3)                                                                   <-----------GT1                                                                   <---------ARR14(2)                                                                  ----------->HVH21                                                            <---------ANAC58                                                            <---------ANAC46                                                            <---------ANAC58                                                           <------NtERF2                                                          <---------DEAR3(2)                  ------>ZmHOX2a(1)              ---------->DOF2                            --------->ETT(1)============================HOX2a_HOX2a           --------->ANAC46                              <---------DEAR3(1)      --------->ANAC58           --------->ANAC58                              <---------RAP2.6(2)     --------->ANAC58   -           --------->ANAC58                             ---------->ID1   <------ZmHOX2a(2)   <------- <---------TOE1(3)                                      --------->RAP2.6(3) --------->At4g35610<----- <---------TOE2(3)       <----------DOF2              <-----------RAV1(1)============================   gttagggtttaacacacaaagcataccctttagatttgtgtctcttagctctgtttttgtcggcttgtgtaaccgatcaactcaagctattggctcctca  28710300                                                                              <---------AHL20(2)                             ---------->DOF2                                ----------->TBP  ===============================HOX2a_HOX2a                              <-----------TBP  ------>ZmHOX2a(1)     --------->ARR11(3)                                --------->AHL20(2)  --------->LBD16       ------->TEIL                                    <----------DOF2 ---------->RAV1(2)     <---------ARR11(3)                           <---------AHL20(1) --ALFIN1 <-----------GT1 ------>ZmHOX2a(2)                          <---------ARR11(3) ----ALFIN1             <---------AGP1                          ------------>CBF    --------->ANAC46 ========HOX2a_HOX2a <---------ATHB12                 --------->YAB1 --------->ARR11(3)----------->RAV1(1)   cctcctgaaatttgacttctccaatggatctcaaagtttctcttatatgaattctatcttcaccctcacaatatctttatatatatgagccacaagaaca  28710400                     *TSS                   ------>NtERF2<-------GAMYB                --------->At4g35610                      --------->HSFB2a(2)                <---------ZAT2 --------->MYB55(2)        <---------HSFB2a(2)                --------->ATERF1(1)                 --------->HSFB2a(1)                <---------At4g35610      --------->WOX13(1) <---------ARR11(3)                --------->ZAT2 <---------MYB46(3)   <---------HSFC1(2)               <---------RAP2.3(1)     ==================HOX2a_HOX2a               <---------ATERF1(1)     <------ZmHOX2a(2) --------->HSFC1(1)                        --              <---------RAP2.3(2)   <---------YAB1  --------->HSFC1(2)                     --------->REM1(1)              <---------RAP2.6(2)<---------ARR14(2) <---------HSFB2a(1)                   <-------TEIL             <-------TEIL  <---------DEAR3(1)     <------ZmHOX2a(1)         <-----------HVH21      --             <---------LBD16  --------->ALFIN1--------->LBD16   <----------DOF2        --------->At4g35610       <---------At4g35610<---------ORA47(1)<---------LBD16 <---------GLK1(2)          <---------At4g35610   agaagagtcagtagatgcggctgccatggacggtggttacgatcaatccggaggagcttctagatactttcacaacctcttcaggcctgagcttcatcac  28710500                                                              --------->At4g35610                                                           --------->At4g35610                                                           --------->ZAT2                                                           <---------ZAT2                                                           <---------At4g35610                     --                                                         <-----------RAV1(2)    ------->TEIL       <-                                                         ================RAV <---------YAB1       <--                                                 --------->TOE1(3)      <---------At4g35610      ----       --------->TOE2(3)                         --------->TOE2(3) <---------GLK1(1)             <---       --------->TOE1(3)                      <---------ALFIN1<---------At4g35610<---------At4g35610<       --------->AtMYB61  <----------DOF2  --------->TOE2(3) ----------->RAV1(1)--------->GLK1(2)---- ------->ZAT2--------->TOE2(3)   ---------->CDC5 --------->AtMYB61 --------->GLK1(1)      ----------- ------->At4g35610   <-----------GT1   ---------->CDC5   ---------->CDC5--------->At4g35610      ----   cagcttcaacctcagcctcaacttcaccctttgcctcagcctcagcctcaacctcagcctcagcagcagaattcagatgatgaatctgactccaacaagg  28710600                                                       ==============HOX2a_HOX2a                                             ------->MYC4                                             ------->PIF5                                             <-------PIF5                                             <-------MYC3                                             ------->MYC3       ----------->HVH21                     <-------MYC4       <---------ETT(1)                      <-------MYC2      --------->DEAR3(2)                    <---------TGA1a    <---------ARR14(2)                      --------->TGA1a                            ----------->HVH21    --------->ARR14(2)                      <---------PIF3(3)                        --------->LBD16 --------->LBD16                            --------->O2       ------>ZmHOX2a(2)   <------NtERF2 ---->ZmHOX2a(2)                            <---------O2<---------LBD16       --------->ANAC46 --------LBD16                            <---------ALFIN1--------->LBD16     --------->ANAC58 ----ZmHOX2a(2)                      <---------HSFC1(2)===============HOX2a_HOX2a --------->MYB52(1) ----->ARR14(2)                 --------->LBD16       <---------SPL7          --------->ANAC58 ------ARR14(2)                ------->GAMYB--------->PIF3(3)--------->ARR14(2)   ------>NtERF2 ---------ANAC46               <---------LBD16--------->ALFIN1<------ZmHOX2a(2) --------->MYB46(3) ----->GLK1(2)                 =======================MYC_MYB<---------ARR14(2) <---------ABI4(2) >RAV1(1)                     <---------LBD16------->MYC2<---------LBD16--------->ANAC58 ----->ARR11(3)<---------MYB52(1)    --------->HSFC1(2)------>ZmHOX2a(1)--------->ANAC58            <   atccgggttccgacccagttacctctggttcaaccgggaaacgtccacgtggacgtcctccgggatccaagaacaagccgaagccaccggtgatagtgac  28710700                                                    <---------DDF1                                                    ------>NtERF2                                                    ----------->RAV1(1)                                                    <---------RAP2.6(3)                                                   --------->RAP2.3(3)                                                   --------->DREB2C(2)                                                   <---------ETT(1)                                                   --------->DEAR3(1)                                                   --------->RAP2.6(2)                                                   --------->RAP2.3(2)                                                  --------->ATERF1(1)                       ------>ZmHOX2a(2)          --------->RAP2.3(1)                      <------ZmHOX2a(2)           --------->DEAR3(2)                     <---------ARR11(3)           <------NtERF2                     --------->ARR11(3)          <---------ATERF1(1)                     <---------AGP1              <---------At4g35610             ------->MYC2                        --------->At4g35610             <-------MYC2                    --------->HSFB2a(2)             <-------MYC3                  =====================RAV                               <--             ------->MYC3                  <---------At4g35610                              <------ZmHOX2a(1)          <---------ALFIN1      <---------HSFB2a(2)----------->HVH21                 <---------TOE1(2)         <---------ALFIN1 <---------TOE1(2)----------->RAV1(2)      --------->DOF5.7(2)<------ZmHOX2a(1) ---------ZAT6      <---------CCA1(2)      --------->At4g35610     <-------GAMYB    <-----------RAV1(2)   tagagatagccccaacgtgcttagatctcatgttcttgaagtctcatctggagccgacatagtcgagagcgttaccacttacgctcgcaggagaggaaga  28710800                                                          --------->ANAC58                                                          --------->MYB46(3)                                                          --------->ANAC58                                                          ----------->HVH21                                                     --------->LBD16                                                     --------->ANAC58                                                     ------>NtERF2                                                     <---------RAP2.6(3)                                                     --------->ANAC58                                                    --------->RAP2.3(2)                                                  --------->ZAT2                                   ================================MYC_MYB                                   --------->TGA1a<---------At4g35610                                   <---------TGA1a--------->At4g35610                                   --------->bZIP60(1)<------NtERF2                                   <---------bZIP60(1)--------->ATERF1(1)                                 --------->MYB52(1)--------->ATERF1(1)                                 <---------DOF5.7(2)--------->ATERF1(2)                              <------NtERF2       <------NtERF2                             ------>NtERF2        <---------ATERF1(1)                             <--                             <---------MYB46(3)   <---------ZAT2                                  <--                         <---------DEAR3(1)   ------>NtERF2                                       <--                     ========================MYC_MYB<---------ATERF1(2)                        ------                     ------->GAMYB --------->O2<---------MYB52(1)                           <--------                    --------->ANAC58          <-----------HVH21 <---------DEAR3(1)        --------->LBD16                    --------->ANAC58--------->TOE2(3)<---------ATERF1(1)                <---------LBD16                   --------->RAP2.6(3)       --------->ANAC46  <---------At4g35610    --------->ARR14(2)                  --------->MYB52(1)<-----------TGA1--------->RAP2.6(2)               --------->TCP20              <---------ZAT6<---------DEAR3(1)--------->LBD16  --------->At4g35610    <---------ARR14(2) ----ZmHOX2a(1)   <---------DOF5.7(2)       <---------LBD16------->GAMYB              --------->TCP16(1)   ggagtctccattctcagtggtaacggcacggtggctaacgtcagtctccggcagccggcaacgacagcggctcatggggcaaatggtggaaccggaggtg  28710900  Previous    Next  AGI:  At1g76500.1    Description:  DNA-binding family protein. similar to ESC (ESCAROLA) [Arabidopsis thaliana] (TAIR:AT1G20900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47552.1); contains InterPro domain Predicted AT-hook DNA-binding (InterPro:IPR014476); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637); contains InterPro domain Protein of unknown function DUF296 (InterPro:IPR005175) Range:  from: 28710421    to: 28711456    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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