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UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                 <--
                                                                                             -------
                                                                                            <-------GAMYB
                                                                                           ------>ZmHOX2a(2)
                                                                                           ---------
                     --------->ARR11(3)                                      <---------ARR11(3) <---
                  <------ZmHOX2a(1)                                          --------->ARR14(2) <---
                  =====================HOX2a_HOX2a                          <---------CCA1(2)<------
             --------->HSFB2a(2)                                           ----------->ARR10--------
             <---------HSFB2a(2)                                    <---------At4g35610   <------ZmHOX2a(2)
    <---------GLK1(1)<---------ARR11(3)                             --------->HSFC1(2)   --------->ARR14(2)
    <---------At4g35610                     ---------->DOF2         <---------HSFC1(2)   <---------ARR14(2)
--MYB46(1)  <---------LBD16     ------>ZmHOX2a(2) ----------->GT1   --------->At4g35610  --------->ARR11(3)
--MYB83  --------->ZAT14<----------DOF2   --------->ANAC58         --------->GLK1(2)     <---------ARR11(3)
-----AGL3<---------ZAT14<---------DAG2    --------->ANAC58    ---------->DOF2--------->ARR11(3)<----
 
gttatggagctctgttctggaggagagctttttgatcgtattatcaagaaaggaagttactctgagaaagaagctgctaatatcttcagacagatcgtta  28543300
                                                                                                ----
                                                                                             -------
                                                                                             -------
                                                                                             -------
                                                                                           ---------
                                                                                          --------->YAB1
                                                                                 --------->GLK1(2)
                                                                                --------->ARR11(3)
                                                                                --------->ARR14(2)
                                                                                <---------ARR14(2)
                                                                                <---------ARR11(3)
---------RAV1(1)                                                      --------->MYB52(1) <---------ATHB12
-->DOF5.7(2)                                                 <---------ANAC46   <---------GLK1(2)
-->GT1<---------YAB1                                         <---------ANAC58  --------->HSFB2a(1)
------TOE1(3)                                                <---------ANAC58  --------->HSFC1(2)
------TOE2(3)            <-------GAMYB                       --------------------->WRI1--------->WOX13(1)
---MYB52(1)  <-----------GT1                             <---------ANAC58      <---------HSFB2a(1)
->TOE2(3)  <-----------HVH21                           --------->ARR11(3)      <---------HSFC1(2)
-----DOF5.7(2)          <---------DEAR3(1)---------->DOF2<---------ANAC58     ----------->ARR10 ----
 
atgttgttcatgtttgtcacttcatgggcgttgttcatagagacttaaagcctgagaatttcttgcttgttagtaacgaagaagattctccaatcaaagc  28543400
 --------->ARR11(3)
 --------->ARR14(2)
 <---------ARR14(2)
 <---------GLK1(2)
------->RAV1(1)                                                    <---------ANAC46
-->ANAC46                                             <---------MYB59
-->ANAC58                         --------->DAG2     --------->ANAC55(2)
-->ANAC58                        ---------->DOF2     <---------ANAC55(2)                        <---
->DOF2      --------------------->WRI1     ------>ZmHOX2a(1)       <---------ANAC58      <---------ARR11(3)
----->MYB52(1)                ----------->GT1<----------DOF2       <---------ANAC58      --------->ARR11(3)
 
aacagattttggactctctgttttcatcgaagaaggtaaagtcatcctctttgattacttaacttaagtgtcttgttaactcttgtttcaaagatttgtc  28543500
                                                                                                 ---
                                                                                               -----
             --------->AHL20(2)             --------->ICU4                                    ------
          --------->DAG2                    ----------->GT1                                  <------
         ---------->DOF2                    <---------YAB1         --------->ANAC58          <------
 <----------DOF2                       --------->TOE1(3)           --------->ANAC58          <------
<---------ANAC58                       --------->TOE2(3)        <------ZmHOX2a(2)        <---------GLK1(1)
<---------ANAC58--------->ICU4         --------->YAB1         <------ZmHOX2a(1)         ------->TEIL
-------DOF2----------->GT1    <------ZmHOX2a(1)         <---------ZAT6 ---------->DOF2 <---------CCA1(2)
 
tttgcttttacataaagtaattagtgtgttttaggagataaaccataatgtttaaactcgtgttaggatcaagaaaaagatagcgacattgtatctccgt  28543600
                                             --------->MYB46(3)
                                            <---------At4g35610
                                           ----------->RAV1(1)
                                          <---------WRKY38(1)
                                         >>>>>>>>>>WRKY63
                                       --------->ANAC58
                                  --------->At4g35610
                                  <---------At4g35610                     <-----------------------TaNAC69(2)
                                 <xxxxxxxxxxxxxxxxsmallRNA(s)         ----------->GT1
<---------PCF2                  <---------WRKY45                     ------------------------>ANAC81
------>ALFIN1                   <---------WRKY12               <------ZmHOX2a(2)
---->ALFIN1                     <---------WRKY38(1)           <---------ARR11(3)  --------->DAG2   -
--->LBD16                      <<<<<<<<<<WRKY11               --------->ARR11(3) ---------->DOF2   <
---ANAC58                      <<<<<<<<<<WRKY6    <---------HSFC1(2) --------->DAG2              ---
---ANAC46        --------->HSFB2a(2)   --------->ANAC58 --------->ANAC46<----------ID1    --------->DAG2
---ANAC58 <---------WRKY12    <-----------HVH21   --------->HSFC1(2)---------->DOF2      ---------->DOF2
 
gtgggacatcaagtcaacttcgaaaacgacttgggtcaactcaagtcaacagatgtttcccacaagatcaaaaaagtgacaaaaaaaagcagaaaagcag  28543700
        <---------LBD16
    <---------AHL20(2)
<---------ICU4                                                                     --------->YAB1
-------->ICU4                                                               --------->At4g35610
---------ATHB12        *TSS               --------->ANAC46   <----------DOF2<---------At4g35610
------>GLK1(1)   <---------YAB1    <---------YAB1      ---------->DOF2 <---------ZAT14          <---
 
aaatcattttatgggggattaatattcttttgaacattttgattcacaccaaaatatcaaaagacttttgagactggagagctgtattagaatttgaata  28543800
                                                       <---------ICU4
                                                       --------->YAB1
                                                      <---------ATHB12
                                                      --------->ICU4
                                                 --------->ANAC55(1)
                                                 --------->ANAC46
                                                 --------->ANAC58                               ----
                                                 --------->ANAC58                        <---------ZAT14
                                            --------->LBD16                         <---------ANAC46
                                          --------------->AtSPL8               <------MYB46(1) <----
                                          --------------->AtSPL3               <------MYB83    -----
                                       --------->GLK1(1)            >>>>>>>>>GT-1  --------->DAG2
------YAB1   --------->At4g35610       <---------GLK1(1)         ----------->GT1  ---------->DOF2
 
tgtttgaatgcatattagctaaaactttggttctgtattttgaaatccgtacaagtaatcatcttatatggttaatatttgtaggtaaagtgtatagaga  28543900
                                                --------->HSFB2a(2)
                                                --------->LBD16
                                                <---------HSFB2a(2)
       <---------At4g35610     --------->ARR11(3)    --------->ANAC58
    <---------ANAC58           <---------ARR11(3)  ---------->DOF2
    <---------ANAC58    <---------At4g35610    <---------ANAC46                      <----------DOF2
----->CCA1(2)           --------->At4g35610   <---------LBD16                     <---------YAB1
-----ARR11(3)           ----------->RAV1(2)   --------->MYB52(1)              <-------GAMYB
---->ARR11(3)          ------->TEIL --------->REM1(1)--------->ANAC58   <---------LBD16
 
tatagttgggagcgcatactacgttgcacctgaagttctacatcgaaactacgggaaagaaatcgatgtatggagcgcgggtgttatgctttacattctt  28544000
                           --------->ANAC58
                       <------MYB83                                                                <
                       <------MYB46(1)                                                            --
                      ----------->ARR10                                                           <-
                      <---------AtMYB61                                           <-----------RAV1(1)
                  <---------LBD16                                   --------->ANAC58              --
            --------------->AGL15                                   --------->ANAC46            ----
            ========================================================================================
          ------>ZmHOX2a(1)--------->ANAC58   --------->At4g35610   --------->ANAC58    <----------ARF1
 
ctcagtggtgttcctccattttggggaggtatgcaaaaaatactgaatcatctaaaattttgtaatcacatactcaacttgaagaatgttggagacatga  28544100
      <------MYB46(1)
      <------MYB83                                                         ------>ZmHOX2a(2)
     --------------->AtSPL8                                              --------->ARR11(3)
     <---------------AtSPL8                                              <---------ARR11(3)
     --------->MYB59                                                --------->At4g35610
---------------AGL15                                                <---------ZAT2
------->TOE1(3)                                         ------>ZmHOX2a(2)<---------AGP1
----------------AGL3                                   <------ZmHOX2a(2) <---------ARR14(2)
------->TOE2(3)   <-----------RAV1(1)                 <---------ARR11(3) --------->ARR14(2)
--->TEIL         <---------TOE2(3)         <---------YAB1        ---------->DOF2
===============MADS_MADS         <---------HSFB2a(2)  --------->ARR11(3)<---------CCA1(2)
 
accttaatttggtactacttaatgttgtttagagaccgagaagactatatttgaggcgatcttagaaggaaagctggatcttgaaacttctccttggcct  28544200
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AGI:  At1g76040.1   
Description:  CPK29 (calcium-dependent protein kinase 29); calmodulin-dependent protein kinase/ kinase. similar to CPK15 (calcium-dependent protein kinase 15), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G21940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61964.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)
Range:  from: 28543724    to: 28545531    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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