Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->GLK1(1)                                                               --------->ARR14(2)                                                               <---------ARR14(2)                                                               --------->GLK1(2)                                                              <---------GLK1(2)                              ---------->DOF2              --------->YAB1                         ---------->DOF2            --------->AHL20(1)                            ---                    <---------ANAC55(2)             <---------AHL20(2)                --------->ANAC55(2)                    ----------->GT1                 <---------AHL20(1)                --------->TOE2(3)               <---------AHL20(2)                   --------->AHL20(2)           <-------TEIL     <--              --------->AHL20(2)         ---------->DOF2--------->RVE1(1)   ---------->DOF2      <---   ctttctaaacaaactatttaatatgtaaaaagaaaagaagacacaaagaaacaataaaatatcagaatcccaaaaatccaaagttcatacttaatatatg  28248700                            <-------MYC2                                                          ---                            ------->MYC2                                                         <---                            ------->MYC3                                                      <------                  --------->ICU4                                                            <--------                --------->YAB1                                        <---------GLK1(2)     ---------               <---------ZAT6                               <----------DOF2                 --------- ------------>AGL15         <-------MYC3                    <---------DAG2                 <---------YAB1 -------------AGL15        ----------->GT1               --------->ARR11(3)                --------->ICU4 --------------AGL2---------->DOF2   ---------->DOF2     <---------ARR11(3)              --------->YAB1   ctattttgggcaaactagtcataaagagcacgtttaaaccaaagaaatataacttacaagaactttttgagagaatttctcaaaatcactagaatgatta  28248800                                                                                    <---------ARR14(3)    <---------AHL20(1)                    <---------ANAC58                          <---------ARR11(3)    --------->ARR11(3)                    <---------ANAC58                          --------->ARR11(3)    --------->AHL20(1)                 <-----------GT1                              --------->ARR14(3) ------>YAB1                    ----------->GT1                                   <---------TOE1(2) ------YAB1                    <---------AHL20(2)                             <-------TEIL<---------YAB1 ---YAB1                   <---------CCA1(1)                                 --------->ARR14(1) -ICU4                     <---------RVE1(1)                                <---------GLK1(2) >YAB1                    --------->ARR11(3)           --------->ATHB12     --------->ARR11(1) >ATHB12                  <---------ARR11(3)      ---------->DOF2         ----------->ARR10        --   tcaaaatatatcgagagcatcatatatagatatttagttatataccttgtgtcaaagtcattgatgcttcttgagttagattcgaaggtcttgtaattgg  28248900                                   ------>ZmHOX2a(1)                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                               <---------ARR14(2)                                               -----                               --------->AGP1                                              <---------                               <---------GLK1(2)                                         <---------At4g35610                               --------->ARR14(2)                                    ------>NtERF2        --------->ANAC58       <---------ARR11(3)                                    ----------->RAV1(1)        ----------->HVH21      --------->ARR11(3)          <----------DOF2          ----------->HVH21        --------->ANAC58      <---------GLK1(1)         <---------ANAC58            <---------ETT(1)   <----------ID1             --------->GLK1(1)         <---------ANAC58            --------->ANAC46 -------->DOF2               ----------->ARR10          <---------ANAC46           --------->SPL7   gcaaagggacacgaccagtctcgatgttgatgagatcctcgacgagaatgtcatagtggcgcttcacttcttctacagttttccctccgacagcttttgc  28249000                            ---------->ID1                         ------>ZmHOX2a(1)                        <---------ANAC58                        <---------ANAC58                <---------ANAC46                <---------ANAC58                 --------->HSFB2a(2)                <---------ANAC58         --------->ANAC58                <-------GAMYB            --------->ANAC58               <---------MYB46(3) --------->At4g35610  --------->ARR11(3) ------------>AGL1--------->ALFIN1<---------At4g35610  <---------ARR11(3) -DOF2      <-----------HVH21<---------ANAC46    <---------HSFB2a(2)       <-------TEIL   cacattgtgccatcggtcgggtgtgtccttgtcgtaaactgccaaggccctctcgaacatcttgttttgactaaacgtccatggtgagattgaacttctt  28249100           --------->AHL20(2)          <---------MYB52(1)      ------>NtERF2     --------->ANAC58                                      --------->ZAT14     --------->ANAC58                                      <---------ZAT14                        ---     --------->ANAC46                                      --------->ZAT18                        ---     --------->bZIP60(1)                     <------------CBF<---------ZAT14          <---------AHL20(2)     <---------bZIP60(1)               ---------->DOF2   <---------------AtSPL8      --------->AHL20(2)    ---------->ID1                ---------->DOF2 ---------->DOF2  <---------ZAT6   ----------->TBP   gagtttgacgccattaatttcttataacttgagatggaaaggaaagagattgaaaagagagagtactgagtgttgaaagttgctctataaaatgaatagc  28249200          ------>ZmHOX2a(1)         --------------->AGL15         <---------ANAC46---------->DOF2         --------->TOE2(3)         <---------------AGL15           --------->GLK1(2)                     ------------>CBF    <-        ----------------->AGL3  <---------GLK1(1)                          <----------DOF2         --        ----------------->AGL1  --------->GLK1(1)                   <---------AHL20(2)           ----   <------NtERF2    <------ZmHOX2a(1)   <---------GLK1(2)          <---------AHL20(2)          <----- ------>ANAC58     ----------->GT1    <---------TOE1(2)            --------->AHL20(2)       <-------- ------>ANAC58   <------ZmHOX2a(1)   ------>ZmHOX2a(1)            --------->YAB1     <-----------GT1   aaggcagggttccttataaggaggagaaaaagagagttcctagattctgcaagttggagagttttctattttaatttctttttcaattcactagcttttc  28249300                                                                <---------AHL20(2)                                                             --------->ATHB51                                                             <---------ICU4                                                             --------->YAB1                                                             -------->HAHB4                                                             <--------ATHB1                                --------->ANAC58             <--------HAHB4                 ---------                          <-----------GT1                   --------->AHL20(2)        <-----------GT1                     <---------CCA1(1)                      --------->ICU4       <---------RVE1(1)   <---------AHL20(2)<---------RVE1(1)                      <---------ATHB51     <---------CCA1(1) --------AHL20(2)   <---------ARR11(3)                      <---------YAB1      <---------ARR11(3) ------->AHL20(2)   --------->ARR11(3)             <---------ZAT18              --------->ARR11(3)  - ----->TOE2(3)      <---------AHL20(1) ------->GAMYB      --------->YAB1        --------->AHL20(1) -- ----YAB1           --------->AHL20(1)--------->MYB46(3) <---------YAB1         <---------AHL20(1)--- --DOF2         ---------->DOF2 --------->ANAC58   --------->ZAT18          ---------->DOF2 ---------   attaattaagttgaaaactaaagatattttactcacgataacagccatattagtggtctataataattaagttgatactaaagatattttactcacgata  28249400                                               <---------ICU4                                               <---------AHL20(2)                                               <--------ATHB1                                               --------->ATHB51                                               --------->AHL20(2)      <---------AHL20(2)                      <---------ATHB51                      ----------->GT1  --------->TOE2(3)                           --------->ICU4                    --------->ARR14(2)  --------->YAB1                         ----------->GT1                        --------->ARR11(3) >ANAC58                                 --------->YAB1                         ------->TEIL ------->P                         --------->ANAC58                             <---------ARR14(2) ----->GAMYB                       --------->ANAC46                            <---------CCA1(2) ------>MYB46(3)              --------->YAB1--------->YAB1                 <---------ANAC55(1) >ANAC58           ---------->DOF2 --------->ANAC58        ------->TEIL    <---------ANAC46   acaaccatattaatggtctacaaaagagtcattcgtaacgccatagtaataatttctgatgtatttttctgaaaattaagtgtatcttgttaaaaactca  28249500                           -------->HAHB4                           <---------ICU4                           --------->YAB1                           <--------HAHB4                           <--------ATHB1                           --------->ATHB51                          <---------ATHB51                          <---------YAB1          --------->YAB1                          --------->ICU4          <--------HAHB4                    --------->DAG2                <---------ICU4                <---------ANAC55(2)             <-----------GT1                ----------->GT1 <---------TOE2(3)<---------YAB1         ----------->GT1--------->YAB1        --------->AHL20(2)                             --------      ----------->GT1----------->GT1          <---------AHL20(2)                            ---------  ---------->DOF2  ---------->DOF2      ------->TEIL              <---------------AtSPL8--------->AHL20(2)   catggaaagtgtgataaaacgtaaagtaataattaagaaatgaaccaatttatcattaccagttgatttaagtacaaagtctattcaacttaaaatatcg  28249600  Previous    Next  AGI:  At1g75250.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT1G19510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47617.1); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 28248734    to: 28249114    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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