Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <----------DOF2 --------->O2 --------->ANAC55(2) <---------ANAC55(2) <---------O2 --------->ANAC58 --------->ANAC55(1) --------->ANAC46 --------->ANAC58 --------ALFIN1 -->MYB46(1) -->MYB83                                                  --------->AtMYB61   <----------DOF2 --->AtMYB61                                            <---------WRKY18(1)    <---------DAG2     --- ----MYB46(2)       <-----------GT1                    --------->WRKY12  <-----------ARR10---------->ID1 --->MYB46(3)     ------>ZmHOX2a(2)                    --------->WRKY45  --------->ARR14(2) <-------- ----MYB111(1)  --------->ARR11(3)                   <-------GAMYB       <---------ARR11(3) <-------- -->ANAC46      <---------ARR11(3)                  <---------ANAC46     --------->ARR11(3) --------- -->ANAC58   ------>ZmHOX2a(2)                <-----------GT1      <-----------GT1       <-----------GT1 -->ANAC58  <---------At4g35610        <---------ATHB12--------->WRKY38(1)   <----------------------- >ANAC46    --------->At4g35610  --------->YAB1  <----------DOF2 <----------DOF2      <--------------   aacacgtctttgtgatctgatcttactgtctccattcatcactcattttttctttcgttgaccacaactttacaatatctacttttttttttttcttttt  28237600                                       --------->ATHB12                                      <---------AHL20(2)                                     <---------WOX13(1)                                   --------->ATHB51            <---------ARR11(3)    <---------YAB1                                                   --            --------->ARR14(2)   --------->AHL20(1)                                               <--            --------->ARR11(3)   --------->AHL20(2)                                           ------>ZmHOX2a(2)           --------->CCA1(1)     <---------AHL20(1)                                          <------ZmHOX2a(2)           --------->RVE1(1)    --------->YAB1                                              <--------    <----------DOF2             <---------ICU4                                              ---------    <---------DAG2             <---------YAB1                                               --------- ------------>AtSPL8           --------->ICU4                                               <-------- --DOF2  --------->YAB1      --------->YAB1                                                 <-------- -------AGL15               <---------YAB1                                                  <-------- ------>AGL15               --------->AHL20(2)              <---------ALFIN1                --------- -ANAC81<---------YAB1      <---------AHL20(2)            ------>ZmHOX2a(1)            <-----------HVH21 ----------ANAC81 <----------DOF2<---------AHL20(2)  <----------DOF2     ----------->GT1   <---------CCA1(2)   tttgaactttataatatcttctttacatatataattataattgattaagtctcttctttcctccacatttttcacatgtaaaatactcccatcagatctt  28237700                            <----------DOF2                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                          <---------RVE1(1)     --------->YAB1      --------->ARR14(2) ------->YAB1            <---------ARR14(2) -------YAB1             <---------ARR11(3) -ARR14(2)               --------->ARR11(3)         --------->TOE2(3)    <---------------AGL15 >ARR14(2)               --------->AGP1           <-------TEIL           --------------->AGL15 >ARR11(3)              <---------CCA1(2)    --------->AHL20(2)          <----------DOF2 -ARR11(3)            --------->YAB1   --------->ANAC46                 <-----------------AGL2 ---ARR10            <---------ATHB12  --------->ANAC58                 <-----------------AGL3 -AGP1             --------->WOX13(1)  --------->ANAC58          <----------DOF2                 ---- >AGP1     <---------ICU4<---------AGP1<----------ID1        <----------DOF2                 <-------   attataaacataaacattactcaatcagatctttagtctatacgaaaaaaaatacatcaaatactttctttccttctttttttggtgaagactattttcc  28237800            ---------->DOF2         <---------AHL20(1)                         --------->YAB1          ------->GAMYB             --------->AHL20(1)                       --------->ANAC58        --------->ANAC58            <---------AHL20(2)                       --------->ANAC46    --------->ANAC58                --------->AHL20(2)              ---------->DOF2    --------->ANAC58             --------->YAB1                    --------->AHL20(2)    --------->ANAC46 --------->ARR11(3)              --------->ATHB12        --------->ANAC58 -->ZmHOX2a(1)       <---------ARR11(3)  --------->MYB52(1)        <---------AHL20(2) ----GT1--------->ANAC58  <---------WRKY18(1)    ----------->GT1  --------->AHL20(2)<----------------   tcgctcacacaacccaaagactagttcttgacctctaataaaataactgtagggtttattgagcccaatttaaagacccaagcaaaaccatattgggctt  28237900                             <---------ANAC58                             <---------ANAC46                          <------NtERF2                         <---------DEAR3(2)                        <---------DEAR3(1)                                             --------->ANAC58                      <-----------HVH21                                                <---------ANAC55(2)                      ----------------------->TaNAC69(2)                               --------->ANAC55(1)                     --------->TGA1a                                                   --------->ANAC46             <------------CBF<---------ANAC58     --------->DAG2         --------->TOE2(3)         ----------------->AGL3             --------->YAB1  <---------HSFB2a(2)        --------->ANAC55(2)    --------->CCA1(2)<---------TGA1a <---------ZAT18    <----------DOF2  <-----------TGA1   --------->ARR14(2)=======================================bZIP_DOF   <---------TOE2(3) <---------TOE2(3)   =======================================bZIP_DOF  <---------DOF5.7(2) <---------YAB1    <------ZmHOX2a(1) --------->ZAT18  --------->ZAT18 --------->MYB52(1)      ------- -AGL2   ----------------->AGL1 --------->REM1(2)---------->DOF2      <-----------GT1  --------->ANAC58   attaagataggcccatattgaggacgtcggagcgtgaagggcactctcatgaaaagcgcgttagagaagaattaacgtcaagacccgagacgcaacttca  28238000   --------->MYB52(2)   <---------MYB46(3)          <---------GLK1(2)                   --------->TOE1(3)   <---------ANAC58    <------MYB46(1)                             --------->TOE2(3)   <---------ANAC58    <------MYB83                            <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <-----------HVH21    <---------TOE2(3)                     --------->AtMYB61          --------->ARR11(3) -->ZAT14 *TSS        --------->MYB59                  --------->DEAR3(2)              <---------ARR11(3)   ctcggtcgtggctaattctccgattaggttttcgattctcttcgtcttcgtctctgaagcgaccaaaaaccctaattctatcaattcgaaatcttcaatt  28238100                                                                 --------->MYB46(3)                                                                --------->ANAC58                                                                --------->ANAC58                                                             --------->MYB46(3)                                                           --------->ARR14(2)                                                         --------->LBD16                                                        ------->GAMYB   --------->ANAC58                                                      --------->MYB52(1)--------->ANAC58                                                      ------>MYB83 --------->WOX13(1)                                                      -------->P<-----------------AGL1                                                      ------>MYB46(1)   --------->ANAC46                          ------->GAMYB              --------->MYB52(1) <---------ANAC55(2)                          --------->YAB1             --------->MYB55(1) --------->ANAC55(2)                         --------->MYB46(3)         --------->AtMYB61 --------->YAB1                 <---------DAG2                    --------->MYB46(3)<---------ATHB12           -----              <-----------GT1<---------ICU4  ------>ZmHOX2a(1)  --------->ANAC46              <------   tcacatgggtgaacattcaccttctcaaccatcatctcatactcttcctccaaaccaaccggaatcacccaatcacgaaacccctaatccaattccaccg  28238200                                   --------->ARR14(2)                  ------>NtERF2  <---------HSFC1(2)                  --------->LBD16--------->HSFC1(2)        ----------->TGA1       <------NtERF2      --------->YAB1          --------->LBD16                                            --------->MYB59     <---------ATHB12        --------->DEAR3(1)                                    --------------->AGL15    ------>MYB46(1)         <---------LBD16                                        <---------------AGL15    ------>MYB83 --------->DEAR3(1)<---------ARR14(2)             ---------->DOF2 <-----------------AG   --------->MYB52(1)      --------->LBD16                 ------->GAMYB          <-----------------AGL1  --------->TOE1(2)        ------>NtERF2                   --------->AtMYB61  <-----------HVH21  --------->TOE2(2)       --------->ANAC46                <---------MYB55(2) --------->ANAC58 <---------MYB52(2)       ------->GAMYB                   --------->MYB46(3) --------->ANAC58 --------->MYB46(3)      --------->MYB46(3)              -------->P    ----------->RAV1(1) ---->LBD16      --------->ANAC46--------->HSFB2a(1)    --------->WOX13(1)   --------->ANAC46 ---LBD16      <---------ATERF1(1) --------->GLK1(2)   --------->MYB46(3)--------->AtMYB61        ---   gaaaccaacgatgacgactccgcctcatccgccggagtttctggctcaatcgtctcatcaaccaccattgaagcaccacaagtcactgaattaggcaatg  28238300                   ------>ZmHOX2a(2)                   ===================HOX2a_HOX2a                  <------ZmHOX2a(2)                              --------->HSFC1(2)                  ====================HOX2a_HOX2a                <---------HSFC1(2)                 --------->ARR11(3)                              <---------HSFB2a(1)                 <---------ARR11(3)                              --------->HSFB2a(1)                 --------->ARR14(2)                           ------>NtERF2                 <---------ARR14(2)                          --------->DEAR3(1)           ------>MYB83                                      <---------DEAR3(1)           ------>MYB46(1)                                 ------>NtERF2           -------->P                                     --------->DEAR3(1)         --------->MYB46(3)                              --------->SPL7         --------->AtMYB61                             ----------->HVH21         <---------MYB111(1)                           ------->GAMYB         <---------MYB55(2)             --------->YAB1<---------MYB55(2)             --------->LBD16         <---------MYB111(2)   <---------HSFB2a(2)    --------->DEAR3(2)           <---------LBD16         <---------MYB46(2)    ------>ZmHOX2a(1)      --------->MYB46(3)    --------->ARR14(2)      <---------ALFIN1     <-----------HVH21     <-----------HVH21          <---------ARR14(2) ---->TEIL--------->MYB55(1)   --------->HSFB2a(2)   --------->ANAC46 ----------->HVH21   tatcgtctccacctaccaagatccctctccgtcctcgaaaaatcagaaaactttcacccgacgacgacgcttccgacggattcaatccggagcataacct  28238400                                                                           --------->AtLEC2                                                                           --------->ANAC58                                                                           --------->ANAC46                   --------->DEAR3(2)                                 --------->GLK1(2)                 --------->ARR14(2)                         =======================================MYC_MYB                 <---------ARR14(2)                         <---------ANAC58              --------->ANAC58                              ------->GAMYB  --------->ANAC58              --------->ANAC58                   --------->ANAC46     <-----------ARR10              --------->ANAC46                   --------->ANAC55(2)  <---------ARR14(2)             <---------------------WRI1          <---------ANAC55(2)  --------->ARR14(2)            ------>NtERF2                        --------->ANAC58 --------->LBD16           --------->DEAR3(1)                <-----------HVH21    ------>NtERF2     ----------->TGA1--------->LBD16     --------->YAB1     <---------ANAC58             <---------TGA1a     ----------->HVH21                  <---------YAB1     <------------AtMYB77          --------->TGA1a   <---------At4g35610                --------->YAB1       ========================================MYC_MYB   --------->At4g35610         ----------->GT1   --------->ANAC58<---------ANAC46--------->ARR11(3)<- <-----------RAV1(2) --------->ANAC46 <---------ICU4      <---------At5g28300    <---------ARR11(3)<-   ttctcagatgacgacgacgaaaccggcaacgaagagtaaattatcacagtcacgcactgtaaccgtgccgagaatccaagcaaggtctctcacttgtgaa  28238500  Previous    Next  AGI:  At1g75230.1    Description:  HhH-GPD base excision DNA repair family protein. similar to HhH-GPD base excision DNA repair family protein [Arabidopsis thaliana] (TAIR:AT1G19480.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72984.1); contains InterPro domain DNA glycosylase; (InterPro:IPR011257); contains InterPro domain HhH-GPD; (InterPro:IPR003265) Range:  from: 28238010    to: 28240402    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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