Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->ARR11(3)                                     --------->ARR14(2)                                     <---------ARR14(2)                                     --------->GLK1(2)                                     <-----------ARR10                                     <---------ARR11(3)                                    <---------CCA1(2)                  --------->AHL20(2)<---------ARR14(1)         --------->YAB1         --------->ANAC58         --------->TOE2(3)      --------->ANAC58       ------->TEIL <---------ANAC55(2)--------->TOE2(3)                          --------->GLK1(2)      <---------CCA1(2)        --------->DAG2                                    <---------GLK1(2) -MYB46(3)     <---------ICU4 ---------->DOF2            <-----------GT1 <-----------GT1    <--------   ttaatcttgtatcttaacaattacttaaactaaaaagcaaatcttagtttttaaaattttttcaaaattttagttttacttaagaatctagtattttttt  28217100                              --------->TOE2(3)                            --------->ARR11(3)                            --------->GLK1(2)                            <---------ARR11(3)                      --------->AHL20(2)                            --------->ARR14(2)                      <---------AHL20(2)                            <---------ARR14(2)                     --------->AHL20(2)                            <-----------ARR10                      --------->AHL20(1)                           <---------ARR14(1)         <---------AHL20(2)      --------->ARR11(3)                           <---------CCA1(2)         <---------AHL20(2)       <---------ARR11(3)                       --------->ANAC58              --------->AHL20(2)      <<<<<<<<<RAP2.2                       --------->ANAC58             <---------WOX13(1)  <---------AHL20(2)   <-------TEIL --------->YAB1 <---------At4g35610              <---------YAB1    <---------AHL20(1)       --------- -AHL20(2)      --------->At4g35610    <---------AHL20(2)          <---------AHL20(2)  ---------->DOF2   cattcataaaaacttcttagctaagaagcaaatcttagtttttaatctgttttgatttatttttcaaaatttattttttagatattagccaaagatacat  28217200                 <---------ZAT18                 --------->ZAT18 <---------YAB1             <-----------RAV1(1) <---------AHL20(2)             --------->ALFIN1    --------->AHL20(2)           --------->YAB1    --------->YAB1    --------->ANAC46     <---------AHL20(2) >CCA1(2) <---------ATHB12--------->YAB1                                                         ----   ctaaatacaccaatagtggtgctctaaataatcatataattgtggccataccaatatttatgtgtgaattggacttggatagatttcgaaataaacatgt  28217300                                                                                                    <                                                                                                 ----                                                                                               <-----                                                                                               <-----                                                                                            ---------                                                                                           <-------MYC3                                                                                           <-------MYC2                                                                                           <-------PIF5                                                                                           ------->MYC3                                                        --------->ALFIN1                   ------->MYC2                                                       <-------MYC3                        ------->PIF5                                                       ------->PIF5                       <---------ANAC58                                                       ------->MYC2                       <---------ANAC58                                                       <-------MYC2                       <---------TGA1a                                                       <-------MYC4                       --------->TGA1a                                                       <-------PIF5                       <---------ANAC55(2)                                                       ------->MYC4                       <---------O2                       --------->YAB1                  ------->MYC3                       --------->ANAC55(2)                    ============================================bZIP_DOF                  <---------bZIP60(2)                    <----------DOF2                   <---------O2                  ------->TEIL<----                   <---------ANAC58                   --------->O2                 <---------CCA1(2)<               <---------ANAC58                       --------->TGA1a          --------->ANAC46<-----        <---------ANAC58                              <---------ANAC46         --------->ANAC55(2)  <        <---------ANAC46                              <---------TGA1a          <---------ANAC55(2) --        <---------ANAC58    --------->GLK1(2)         <---------ANAC55(2)   --------->ARR14(2) <-----  <---------YAB1   <---------ANAC58              ----------->HVH21   --------->GLK1(2)    --------->O2 --->TEIL      <---------ANAC58           <---------TOE2(3)<---------ANAC46 <---------ARR14(2)<------NtERF2   atttttgattccttgggccttgctttcaaaattctatggcctctaaggcaattgacacgtggagtatgcagaatcaagtatacgtgaatctcacgtggcg  28217400                                                                                        <----------DOF2                                                                                     --------->ARR11(3)       <---------MYB52(1)                                                            <---------ARR11(3)   --------->SPL7                                                             --------->At4g35610 <---------SPL7                                                               <------MYB83<---------- <---------RAP2.6(3)                                                          <---------ANAC46 <---------SPL1(2)            <---------AHL20(2)                             --------->MYB52(2) ---------ANAC58             --------->YAB1                                  --------->MYB111(1) ----->ALFIN1            <---------AHL20(2)                                  --------->MYB46(2) ----ANAC58              <---------YAB1                                      --------->MYB59 ----ANAC58              --------->AHL20(2)                                  --------->MYB111(2) >ALFIN1                --------->AHL20(2)                                   --------->MYB55(2) -----SPL7              --------->AHL20(1)                                   <---------MYB46(3) ---------ANAC58   --------->AHL20(2)                --------->ZAT18        <---------MYB55(1) ----bZIP60(2)  --------->TOE2(3)              <---------MYB46(3)          <---------MYB52(1) ---------ANAC46--------->TOE1(3)            <-------GAMYB     --------->ZAT14<------MYB46(1)<------- ------------->AtSPL3   <---------AHL20(1)  <-----------RAV1(1)<---------ZAT14<---------ANAC55(2) ----ANAC46 <---------MYB52(1)--------->AHL20(2)     <---------ZAT18*TSS  <-----------HVH21  <-------   tgccgtaccgttcagttaccttaaaatataattttaatcgctgtctctgttgttgtccacttgtctgaactgcaagcgttaggtgaatgtctttactttt  28217500                                           ----------->HVH21  --------->ANAC46                       <---------ZAT2  --------->ANAC58                       --------->ZAT2  --------->ANAC58                       <---------At4g35610                 <---------ARR11(3) <---------HSFB2a(2)                     ----------->RAV1(2)             ---------->DOF2 --------->HSFB2a(2)                     --------->At4g35610           <---------ZAT14 -GT1                                  <-----------RAV1(2)         <---------ICU4   <----------DOF2 ---DOF2      <---------AtLEC2  <---------DAG2               ---------->ID1  --------->ARR11(3)   <-- --DAG2   <----------DOF2       <----------DOF2        ------>NtERF2   --------->ZAT14      ------>ZmHOX2a(1)   cttctcgcaactcttttcatgaaatcagtttcaacttttcttcagctgactcttctccgacttgtctcatcactgcaaagttctctctttattcctcgtt  28217600                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                               --------->At4g35610                               <---------TOE2(3)                               <---------At4g35610  <                         --------------->AGL15                                 ----------->RAV1(2)<--         --------->SPL7  <---------------AGL15                             <-----------GT1       ----     --------------->AtSPL3    <---------TOE1(3)                      <---------AHL20(2)     --------     --------------->AtSPL8   ---------->DOF2     <------------------------ANAC81----------->HVH21<-- ---------------AGL1     <----------DOF2  <----------DOF2            <---------YAB1         ---------   ctctgtttcggtactaccctcgttcttctttttaaagtttgggtctttcatttgatttcatactcttgatttttattttacatctgacgactagaaaagt  28217700                                                                                       <----------DOF2                                                                             ------>ZmHOX2a(2) <-------TEIL                                                               <------ZmHOX2a(2) ----->MYB46(2)                                                            --------->ARR11(3) ----->MYB111(1)                                                           <---------ARR14(2) ------- ----->MYB59                                                               <---------ARR11(3) <------ --------P                                                                 --------->ARR14(2) <------ ----MYB46(1)                                                              <---------ARR14(3) ------- ----->MYB111(2)                                                           <---------AGP1     <------ ->DAG2      <----------DOF2                                               --------->ARR14(3) <------ ----MYB83------->TEIL                         <----------DOF2            <---------CCA1(2)   ------- ->DOF2<---------YAB1                  <------ZmHOX2a(1)<---------ZAT6   ----------->ARR10   <-------   aggtagattatgaatctttctgggtttgtagtgagtttataggaaattcctttgtctagtgttccaaaatttgagtagatcttgaacaactttgcaaatc  28217800                                                                                               ------                                                                                              <------                                                                                     <-------GAMYB                                                                                    --------->MYB55(2)     ------>ZmHOX2a(2)                                                             --------->ALFIN1    <---------WOX13(1)                                                           <------MYB83 ------- -->GLK1(2)                                                                      <------MYB46(1) ---ARR11(3)                       <---------GLK1(2)                            --------->MYB55(2) ---ARR11(1)                       --------->ARR11(3)                           --------->MYB46(2) -->ARR11(3)                       <---------ARR11(3)                           --------->MYB111(2)<- -----ARR10                     --------------->AGL15            --------->At4g35610<---------MYB46(3) ---ARR14(2)                 <-----------GT1           <---------ANAC46         --------->MYB111(1)<- -->ARR14(2)         ----------->GT1             <---------TOE2(3)              <---------MYB46(3)<-- --CCA1(2)<---------YAB1    --------->AHL20(2)   <---------TOE1(3)             <---------MYB55(1) ---   ttgttgatcgatatgtttgggaattgaaaatttactagattttgaatttctgaggttttgtgtaagcagttgaatgaagcagtaggtggttgagtcatgt  28217900                                                                                        <----------DOF2                                                                                       <---------ANAC58                       <-----------HVH21                                               <---------ANAC58                    --------->ANAC55(2)                                         <-----------GT1                    --------->ANAC58                                        -------->ATHB1                    --------->ANAC55(1)                                     --------->ATHB51                    --------->ANAC58                      <---------MYB46(3)<---------ICU4                    --------->ANAC46                ------->GAMYB           --------->YAB1                  <---------ALFIN1                 --------->MYB46(3)       <---------AHL20(2) --->ATHB12<---------ANAC58                       <---------At5g28300       <--------HAHB4 ---YAB1--------->bZIP60(1)             --------------------->WRI1          -------->HAHB4 -->ICU4<---------bZIP60(1)             <----------DOF2  <---------MYB52(1)<---------YAB1 -----MYB46(1)<-----------HVH21        <---------ANAC58 <-------GAMYB      <---------ATHB12 -----MYB83<---------ANAC58<---------ANAC55(2)   --------->MYB52(1)        --------->ICU4 -------AtMYB61----------->HVH21       <---------ANAC58<---------MYB46(3)  <---------ATHB51 ------>MYB59------>ZmHOX2a(1)  ------->TEIL     <-----------GT1<---------ZAT6<---------YAB1   ttggtctgtgatgtcctgtcacacgcatcacatgaaccttggctttggatttaacggccgttgttagtattaggctaattattaacatggcttttgttca  28218000  Previous    Next  AGI:  At1g75170.1    Description:  SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein. similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT4G36640.1); similar to transporter-like protein [Solanum tuberosum] (GB:ABC01895.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde binding/alpha-tocopherol transport; (InterPro:IPR001071); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273); contains InterPro domain Phosphatidylinosi Range:  from: 28217468    to: 28219548    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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