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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                               -----
                                                                                           ---------
                                                                        --------->AHL20(2)--------->ICU4
                          ----------->GT1                             --------->YAB1    <---------ICU4
                          <------MYB83                              --------->AHL20(2) <---------ATHB51
                          <------MYB46(1)                          --------->YAB1      <---------AHL20(2)
                --------->MYB52(1)                                --------->AHL20(2)   --------->ICU4
             --------->YAB1                                     --------->YAB1         --------->AHL20(2)
       ----------->GT1   --------->MYB59                  ----------->GT1<---------AHL20(2)<--------
  >>>>>>>>>>>>>>>>>LFY<---------ARR14(2)                  --------->YAB1<---------AHL20(2)<---------YAB1
 
acttataccattgtaaaaataagggaatttggtcaaaaattccaaaaaaaaacttatactattgtaaaaataaaaataaatgacatcgaaataattaata  28174300
                                                                                                <---
                                                                                         --------->AHL20(2)
                                      <---------ARR14(2)                                 <---------AHL20(2)
                                      --------->AGP1                                 --------->AHL20(2)
                                      --------->ARR14(2)                        --------->AHL20(2)
       --------->PCF5                --------->At4g35610                    --------->AHL20(1) -----
  ----------->RAV1(2)     --------->AHL20(2)          --------->AHL20(2)    <---------AHL20(1)<-----
 --------->ARR11(3)       <---------AHL20(2)      <---------YAB1            --------->AHL20(2)------
---->YAB1             <---------CCA1(2)<------ZmHOX2a(2)                    <---------AHL20(2)------
>AHL20(2)           ----------->GT1  <---------At4g35610   --------->ARR11(3)   <---------AHL20(2) -
-AHL20(2)       ------->TEIL--------->YAB1     <---------AHL20(2)          --------->AHL20(2)<------
 
aaaacatctggtccccatgaaactcgtatattaatacttcagatccaaaatttatgaaaaaatatcaagctcaatgtattaaattaaaaaatataaatca  28174400
                                     <---------ICU4
                                    <---------YAB1
                                 <---------ATHB12
                                 <---------ATHB51
                      <------MYB83--------->YAB1
                      <------MYB46(1)--------->YAB1
                     --------->MYB59--------->ICU4
       <---------ARR11(3)    --------->MYB46(3)
       <---------GLK1(2)    --------->ANAC58             <---------AHL20(2)
------YAB1           --------->MYB46(2)                 --------->ICU4
---->TOE2(3)         --------->MYB111(1)                --------->AHL20(2)
----ICU4             --------------->AtSPL8             <---------AHL20(2)
--->YAB1             <---------MYB46(3)            ----------->GT1
--->ATHB12   <---------YAB1 --------->ANAC46      --------->DAG2      <----------DOF2
--------->DOF2       <---------------AtSPL8--------->ALFIN1          <---------ANAC58      ---------
---ATHB12 <---------AHL20(2)--------->ANAC58     ---------->DOF2     <---------ANAC58     ----------
 
ttaaaagctagattttattcttgtttggtacaaccaataataataagtggggaaaagtattaattagagtttgcttcacgtttgagtttcacaaaaagtg  28174500
               <---------AHL20(2)
              --------->AHL20(2)
   ------>NtERF2 <-----------GT1                                       <----------DOF2
  <---------bZIP60(1)                                                 <---------DAG2
  --------->ANAC58                   <----------DOF2                ---------->ID1
  --------->ANAC46      --------->ANAC58                 --------->AtLEC2                     ------
  --------->ANAC58    <-----------HVH21     <---------ARR14(2)     <-----------GT1     --------->GLK1(2)
>DAG2   <------ZmHOX2a(1)      <-----------HVH21         --------->ANAC46   <---------ZAT18  <------ZmHOX2a(2)
>DOF2<-----------RAV1(2)--------->ANAC58    --------->ARR14(2) <----------DOF2     <---------At4g35610
 
taacgacgccaggagaattttatcgggtcgcaagtgtcacctttgtggattttgtcttccctgcaacttttgaccttttcgcactcagcgaatcagatcg  28174600
                                                                <---------ARR14(2)
                                                                --------->ARR14(2)
               ------>MYB83                                  <---------ANAC55(2)
               ------>MYB46(1)                          --------->ANAC46
           --------->ANAC46                             --------->ANAC58
           --------->ANAC58                        ----------->HVH21
          ------->TEIL                             <---------ETT(1)
         <---------ALFIN1                         =========================HOX2a_HOX2a
        <---------ZAT18                           ------>ZmHOX2a(2)
        <---------ZAT14                          ==========================HOX2a_HOX2a
        --------->ZAT14                          <------ZmHOX2a(2)                         <-------TEIL
        --------->ABI4(2)                       <---------ARR14(2)                        --------->ARR14(1)
    <---------DEAR3(1)                          --------->ARR14(2)                        --------->CCA1(2)
   --------->SPL7                               --------->AGP1  ------->TEIL  *TSS       <---------GLK1(2)
   --------->ZAT14                            --------->MYB59--------->ANAC55(2)         --------->ARR11(1)
   <---------ZAT14                       --------->ICU4 --------->ANAC58     <---------HSFC1(2)
 <---------SPL7-------->P        <---------ALFIN1--------->CCA1(2)  ------>ZmHOX2a(1)    <---------ARR14(2)
>ZmHOX2a(2)--------->ANAC58 --------->KAN4(2) ----------->ARR10<---------CCA1(2)         --------->ARR14(2)
 
ctatagtacggtgcaccctaccgtctctgatcatccccactgtcttaattagatccgacccgaaacgtatccttctctgaaacttcgtttgagattcgca  28174700
                                                        --------->ARR14(2)                       ===
                               <----------DOF2         <---------MYB52(1)                        <--
                             ------>ZmHOX2a(1)       <---------ANAC58                        <------
                         <-----------GT1             <---------ANAC58   --------->LBD16--------->ARR14(2)
                        --------->YAB1      ------>NtERF2              <-----------RAV1(2)   -------
------>ZmHOX2a(1) <-----------GT1       --------->ANAC46<---------ARR14(2)  <-------TEIL   ------>ZmHOX2a(1)
 
ttcctctgttcttccaccatttaacaattatcctcttttgtcttcgccaacttcttccgtttcttcatacttctccaggtacttcgtcgagttcctcgtg  28174800
                                                                                   <------ZmHOX2a(2)
                                                                                  <---------ARR14(2)
                                                                              --------->ALFIN1
                                                                             <-------MYC3
                                                                             ------->MYC3
                           --------->O2                                      ------->MYC2
                           <---------O2                                      <-------MYC2
                           <---------ANAC58                                  ------->PIF5
                           --------->ANAC55(2)                               <-------PIF5
                           <---------TGA1a                                  --------->TGA1a
                           <---------ANAC55(1)                              <---------bZIP60(2)
                           =============================================bZIP_DOF  --------->ARR14(2)
                           --------->TGA1a                                  <---------TGA1a
                           <---------ANAC46                                 <---------ANAC58
                           <---------ANAC55(2)                              --------->ANAC55(2)
                          <-------TEIL                                      <---------O2
                        --------->ARR14(2)                                  <---------ANAC55(2)
                        <---------ARR14(2)                                  ========================
                        --------->ARR11(1)                                  --------->O2
             <---------DAG2<---------ANAC58                                 <---------ANAC46
             ========================bZIP_DOF                          <---------CCA1(2)
             <----------DOF2          --------->ALFIN1             ------>ZmHOX2a(2)------>ZmHOX2a(2)
 <<<<<<<<<RAP2.2      ----------->ARR10                          <---------ARR11(3)--------->At4g35610
=====================================bZIP_DOF                    --------->ARR11(3)<---------At4g35610
--------DOF2<---------ANAC58      <---------ZAT14            <----------DOF2<---------ANAC58       <
-PIF5       <---------ANAC58--------->TOE1(2)                --------------------->WRI1           <-
>PIF5     <-----------GT1--------->CCA1(2)                   =========================bZIP_DOF------
 
ctttagattgtttttgcttttttcgaagatacgtgagagaagtgtttctcttgctctgtctcttctttgatcttatatcacgtgggatctgattttttag  28174900
                                                                                     <-------TEIL
                                                                                    --------->ARR14(1)
                            <------ZmHOX2a(1)                                      <---------GLK1(2)
                   --------------->AGL15                                           --------->ARR11(1)
                   <---------------AGL15                                     <---------YAB1
      <-----------GT1     <---------TOE2(3)                                <---------ICU4         <-
=========================bZIP_DOF             <---------GLK1(1)           <---------YAB1          --
---------ANAC46   ----------------->AGL1      --------->GLK1(1)           --------->ICU4         ---
--------LBD16     ----------------->AG     <---------MYB52(1)            <---------TOE2(3) <--------
--->MYB52(2)  <----------DOF2             --------->LBD16               --------->YAB1     ---------
 
ttgcggtattcacaagtctttcccaatttgaggatgttttgtctccgtgatttctgtgtttttgttttggaatattgatgattatagattcgaaattatg  28175000
                                  --------->ICU4
                                  <---------YAB1                            <---------GLK1(1)
                               <---------YAB1                               --------->GLK1(1)
<----------DOF2        <---------ARR11(1)                               <---------TOE2(3)
--------At4g35610      <-----------ARR10                                --------->ANAC58       <----
------->At4g35610      --------->ARR14(2)  <---------MYB46(3)           --------->ANAC58      <-----
---->TEIL              --------->GLK1(2) <---------ANAC58    <---------At4g35610              <-----
-ATHB51                ------->TEIL<---------ICU4------->TEIL--------->At4g35610         <----------
>ICU4                  <---------ARR14(2)<---------ANAC58  --------->ZAT14<------ZmHOX2a(1)   <-----
 
cagctttagatactaactaaatgacgaatcttttctcattattcgcttgttgaatcttccactgagctcatagataaggaattctctgttcattgttgct  28175100
                                                                          --------->ARR11(3)
------DOF2                  --------->ARR14(2)                            <---------AHL20(1)      --
----ANAC58              <-------TEIL       <-----------------AGL1      --------->AHL20(2)        ---
----ANAC58        ------>ZmHOX2a(1)       <-----------GT1          <----------DOF2               <--
-RAV1(1)          --------->LBD16    --------->TOE2(3)            <---------ANAC58            ------
----ANAC46       --------->TOE1(2)   <---------DAG2               <---------ANAC58    --------->YAB1
 
tttagagcttaattcatgttcctgagattcaaatttgcaacctttttcccacttatgtaagaaaaaatggctttttatatattcttcattcatggctgtg  28175200
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AGI:  At1g75020.1   
Description:  LPAT4; acyltransferase. Identical to Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 (LPAT4) [Arabidopsis Thaliana] (GB:Q8L4Y2;GB:Q9C9P8;GB:Q9SSH0); similar to LPAT5, acyltransferase [Arabidopsis thaliana] (TAIR:AT3G18850.2); similar to LPAT5, acyltransferase [Arabidopsis thaliana] (TAIR:AT3G18850.3); similar to LPAT5 [Arabidopsis thaliana] (TAIR:AT3G18850.4); similar to unnamed protein product [Vitis vinifera] (GB:CAO61220.1); contains InterPro domain Phospholipid/glycerol acyltransferase; (InterPro:IPR002123)
Range:  from: 28174679    to: 28177097    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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