Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                <----                                                                                                -----                                                                                            <--------                                              <---------GLK1(2)               --------->ANAC55(2)                                         --------->YAB1                       <---------ANAC55(2)                                         <---------ICU4                --------->ANAC46    --------->ICU4                                        <---------ATHB12              --------->LBD16      <---------YAB1    <-------TEIL                      --------->YAB1                 <---------HSFB2a(2) --------->YAB1 -TEIL  <-------TEIL                 --------->AHL20(2)              --------->HSFB2a(2)<-------TEIL   tacacatacatacatatatagaaattgattcaaaatccattaatcatcgattctctacaacgattcaatttccagacaacatgtaatcgattcataattc  28153700                                              ------>ZmHOX2a(2)            --------->ARR14(2)               <------ZmHOX2a(2)          --------->ANAC58                  --------->AGP1                              <-----------HVH21          --------->ANAC58                  <---------AGP1   <-------TEIL            <---------ANAC58          --------->ANAC46                  <---------ARR11(3)                       <---------ANAC58   --------->ANAC58                         --------->ARR14(2)                       <---------AtLEC2   --------->ANAC58             --------->ANAC58            <--------P      --------->ALFIN1   --------->ANAC46             --------->ANAC58          ----------->GT1<---------TOE2(3) ------>GT1<------ZmHOX2a(1) <---------ARR14(2)          --------->DAG2 <---------DOF5.7(2)        <- -----ANAC55(2)      --------->ARR14(2)     <---------ARR14(2)        --------->DOF5.7(2)          -- ---->ANAC55(2)      <---------ARR14(2)     --------->ARR11(3)--------->ATHB12   <---------ANAC58  -- -ICU4----------->RAV1(1)    --------->ARR14(2)  ---------->DOF2   <---------YAB1<---------ANAC58  <-   gtaattcgcaacaggaaactcaaaattcgcagaaacgaaatgaacagatctaaaagagaaaggttgattaccattaacgtcgggcttgcatgtcatccct  28153800       ------>ZmHOX2a(2)       ===========================HOX2a_HOX2a      <------ZmHOX2a(2)      ============================HOX2a_HOX2a      --------->GLK1(1)      <---------GLK1(1)     --------->ARR11(3)     --------->ARR14(2)             --------->MYB46(3)     <---------ARR14(2)           --------->MYB52(1)     <---------ARR11(3)           <---------DOF5.7(2)     --------->ARR14(3)        --------->ANAC55(2)     --------->AGP1            <---------At4g35610     <---------AGP1          <-----------RAV1(2)    <---------CCA1(2)      ------>ZmHOX2a(1)   ----------->ARR10    <---------------AGL15                                                      -- --------ZAT2    -------->P<-----------HVH21                                                     ---- ------->ZAT2<-----------ARR10 --------->ANAC46                                              <------- ------->At4g35610      --------------->AGL15     <-------TEIL---------->DOF2                -------- --------At4g35610     <-----------------AGL1 <---------------AtSPL8               --------->ZAT14 <-   aagctcagatctccaaaactacccttctccttcaggtaacgactcaatcgagtacatgtttgtgaaaagctcggtttacgaccagagaagtcccaacact  28153900                                                                             --------->LBD16                                                                           ----------->RAV1(2)                                                                    ================HOX2a_HOX2a                                                                    ------>ZmHOX2a(2)                                                                   =================HOX2a_HOX2a                                                                   <------ZmHOX2a(2)                                                                   --------->HSFB2a(1)            ---                                                                   <---------HSFB2a(1)            ---                                                                  <---------ARR14(2)              <--                                                                  <-----------ARR10               ---                                                                  <---------ARR11(3)              <--                                                                  <---------ARR14(3)             <--- ------->At4g35610                                                --------->ARR14(3)             <--- ----->ANAC46                                                     --------->ARR14(2)          ------- --ALFIN1                                                         --------->ARR11(3)          ------- ->ZAT6                                                          <------ZmHOX2a(1)<---------MYB46(3) -----NtERF2                              <---------YAB1     ---------->DOF2 ------>ZmHOX2a(1)<------   cggcagaaaaactcgacatcgttgaaaccgaaattgaaatcgtttcgattgagaaattggagcaaaaggatcttccttcctgagttgttgaattttctcg  28154000 ---->TEIL ------>ARR14(2) -------ARR14(2) ------>GLK1(2)                                         --------->O2                               <- -------ARR11(1)                                        <---------O2                  <----------DOF2 ------ARR14(1)                <----------DOF2 <----------DOF2                        <---------DAG2< ------CCA1(2)              <-----------GT1   <---------ANAC58                     <-----------GT1<-- -->HSFC1(1)               <---------CCA1(2)  <---------ANAC58                  <---------ICU4    --- -->HSFB2a(2)        <---------ANAC58        <-------TEIL   <------ZmHOX2a(1) <----------DOF2    <--- ---HSFB2a(2)        <---------ANAC58 ------>NtERF2 <-----------HVH21   <------ZmHOX2a(1)        <---   aatcttataaaaaaacttagggttcttgtttatctttctctgccaagtgcgttttgtcacgaggaagaaatggaggacctctttattacttttttttcgc  28154100          ----------->GT1                                                    <---------AHL20(1)         <---------ANAC55(2)                                                 --------->AHL20(1)         --------->ANAC58                                                    <---------AHL20(2)         --------->ANAC55(2)                                             <---------AHL20(2)        <---------LBD16                                            <-------MYC3        <-------TEIL                                               ------->MYC4       --------->CCA1(2)                                           ------->MYC2       --------->ARR14(1)                                          <-------MYC4      --------->ARR14(2)                                           ------->MYC3           ------->GAMYB      <---------ARR14(2)                                           <-------MYC2           ===========      --------->ARR11(1)                                          <---------O2  <---------TOE2(3)     *TSS--------->ANAC58                                         --------->ANAC55(2)    --------->ANAC46 ------GAMYB                                  <---------TOE2(3)   <---------TGA1a       --------->RAP2.6(3) --------P--------->LBD16               --------->ICU4            --------->TGA1a      --------->MYB52(1) -------MYB46(3)                        <---------AHL20(2)        ================================MYC_MYB ------>MYB55(2)                        --------->AHL20(2)        <---------ANAC55(2)  <-----------GT1 ------TOE2(2)   ----------->GT1     <---------ZAT6        --------->AHL20(2)--------->AHL20(2) ----- ------TOE1(2) --------->ICU4  <---------YAB1 <---------YAB1      --------->O2<---------AHL20(2)<----   tggttgcagatacggaaattagtaaaatatactcttatagtattaattaacatagagacatttaaaacacgtgttttaatttaatgttttaacggcagac  28154200                         <---------O2                         --------->bZIP60(2)                         --------->ANAC58                         --------->O2                         --------->ANAC46                         --------->ANAC58                         --------->TGA1a                         <---------TGA1a                       <---------ALFIN1                      --------->MYB46(3)                      --------->DEAR3(1)                     --------->ANAC58                     --------->ANAC58                  <---------MYB52(1)                 <-----------TGA1                 <-----------HVH21                --------->DEAR3(1)                --------->DREB2C(2)                --------->ANAC46 --------->ANAC46             --------->DEAR3(1)  --------->ANAC58             <---------ALFIN1    <---------ALFIN1         <------ZmHOX2a(2)  --------->PCF2        --------->ARR11(3)<-------PIF5       <---------At4g35610------->PIF5       --------->At4g35610<-----------HVH21                                               <---------- ==================================MYC_MYB                                               <-----------GT1 ---->ZAT14  --------->AtMYB61   --------->ANAC58         <-----------GT1        <-----------GT1 -----ZAT14 --------->MYB46(3) <---------ALFIN1   <-----------GT1          ------>ZmHOX2a(1)<--------   cactgtttcagatcaccaccgtcacccacgtccccacgcttcacacttgaaataaccatttcaccctcttactactcctgtttttaccattttaccctta  28154300                          --------->YAB1                         <---------YAB1                                                   --------->YAB1                      --------->ICU4           --------->AHL20(1)                        <---------YAB1                --------->AHL20(2)             --------->AHL20(2)                      <---------ICU4           --------->AHL20(1)   --------->TOE2(3)                                      --------->YAB1           --------->AHL20(2)  ----------->GT1 <---------AHL20(2)                     --------->ICU4 --------->ARR11(3)<---------AHL20(2)         --------->AHL20(2)          --------->At4g35610 <---------ARR11(3)--------->AHL20(2)    ------>ZmHOX2a(1)                <---------At4g35610 -GT1      <---------AHL20(2)  <---------ANAC55(2) <---------ICU4       <-----------RAV1(2) -------AGL15  --------->AHL20(2)       --------->TOE2(3)       <---------ATHB12   <---------YAB1<---   caagatgttcaaataaaataaaaaattatgaaaacgtaaaatcctaaaattaattagttcaaacaaatcaatgttcagatgaaatttgattatgatagtc  28154400                                                                                                  ---                               <----------DOF2                                                    <--                           <-----------GT1                          ------->TEIL                 ----                          <---------CCA1(2)                      --------->ANAC55(2)      --------->ZAT18                  <------MYB46(1)                             <---------AHL20(2)   <---------AHL20(2)                  <------MYB83 ------>ZmHOX2a(1)           --------->AHL20(2)     <---------AHL20(2)      <-----------GT1<-------TEIL                          <---------AHL20(2)     --------->AHL20(2) -------DOF2      <---------MYB46(3)          ------->TEIL--------->AHL20(2)--------->ZAT6<---------ZAT18   tttcagttataccatttagttggttcatatatccttttttttaagatgaatctcttggcattaatttatgtatttttagcactattaattagtctactat  28154500                                                        <---------LBD16                              --------->ANAC58         --------->ALFIN1                              --------->ANAC58     --------->ATHB12                   --------->CCA1(2)                         <-----------GT1      ------->GAMYB                  ------->GAMYB               <---------ANAC46             <---------TOE2(3)              <---------At5g28300               <---------ANAC58            <---------DOF5.7(2)            --------->MYB52(1) ------>AHL20(2)    <---------RVE1(1)      <-----------GT1 ----------->GT1<-----------GT1 -------AHL20(2)   <---------ARR11(3)      --------->MYB52(1)         <------ZmHOX2a(1)             - ----->YAB1    <---------ANAC58  ---------->DOF2  <---------YAB1---------->DOF2  <---------MYB52(1) <   tttaatctcatagaccggcgtgatattttagcactcaaagagaattaacggtatgatttgggggaaaaaagaggattaacggcgttagatagagggaaca  28154600  Previous    Next  AGI:  At1g74950.1    Description:  JAZ2/TIFY10B (JASMONATE-ZIM-DOMAIN PROTEIN 2). Identical to Protein TIFY 10B (TIFY10B) [Arabidopsis Thaliana] (GB:Q9S7M2;GB:Q8LBU1); similar to JAZ1/TIFY10A (JASMONATE-ZIM-DOMAIN PROTEIN 1), protein binding [Arabidopsis thaliana] (TAIR:AT1G19180.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96213.1); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 28152236    to: 28154105    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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