Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->ARR11(3)                      <---------ARR11(3)                              <----------DOF2           ------->TEIL                                              --------->YAB1        --------->ANAC46                                             <---------ICU4             <----        --------->ANAC58                                       <------ZmHOX2a(1)            ---------        --------->ANAC58    <-----------GT1                ---------->DOF2            <---------YAB1    ----------->RAV1(1)  <----------DOF2         --------->MYB46(3)--------->GLK1(2)----------->GT1<-   agactgcaacacgaatttagacaaggtcttttaccctagtaacctagtctaaccaagaattcaaaggacaatctttatttctctagttgtaattagcttc  28098100                                                                                 <----------ID1 --------->ANAC58                       ---------->DOF2                          ----------->GT1    - --------->ANAC58         --------->AHL20(2)                             <---------------AGL15     <- -------RAV1(2)           <---------AHL20(2)                             --------------->AGL15   ---- >At4g35610              <---------AHL20(2)       --------->MYB52(1)    <-----------------AG <------- -----ZmHOX2a(1)         --------->AHL20(2)   <------ZmHOX2a(1)         =============================   aggaagcaagagagttctaaactcgaatttaatttgtgaacataaagaggagtaacagagattaaaacagagcaactcatttagggaaaaaaaaacttat  28098200                                                                                             ------>ZmHOX2a(2)                                                                                            ---------                                                                                            <------ZmHOX2a(2)                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                           --------->ARR11(3)                                                                                           <---------GLK1(2)                                                                                           --------->AGP1                                                                                      ------>NtERF2                                                                                      <-----------HVH21                                                                                     --------->ANAC46                                                                                     ------->GAMYB                                                                                     --------->DEAR3(1)                                                                                    --------->MYB46(3)                                                                                   <---------ATERF1(1)         --------->ARR11(3)                                                       <---------ALFIN1         <-----------ARR10                                                    <---------At4g35610   -         <---------ARR11(3)                                             --------->LBD16    --------->ARR14(3)      --------->AHL20(2)            --------->YAB1                     <---------ANAC46    <---------ARR14(3)   ----------->GT1        --------->ZAT2                               <---------LBD16----------->RAV1(1)  ----------->GT1         <---------ZAT2                               <---------HSFB2a(2) <---------ARR11(3) ---------->GT1           ----------->RAV1(2)              <---------ARR11(3) --------->GLK1(1) ----- --------TOE2(3)          --------->At4g35610           --------->HSFB2a(2)   --------->At4g35610   - ------>DOF2 <-----------GT1 --------->ZAT18      --------->ANAC58     --------->HSFB2a(2)--------->At4g35610 --------AGL15  --------->TOE2(3)  <---------YAB1 --------->ANAC58    <---------LBD16--------->DREB2C(2) ========MADS_MADS        <---------At4g35610 <-----------GT1        --------->MYB52(1)   <---------At4g35610   aaaggtgataaaatctaacctcatcttcagctgcgctatgatacttatatacaagcttcaagaactcaaacttccgggagagctccaccgccagatcccc  28098300                                                               --------->ANAC58                                                          <---------ANAC55(2)                                                  ----------->RAV1(2)                                                  <---------At4g35610                                                  --------->At4g35610                                                <-----------RAV1(2)                                                --------->MYB46(3)                                             <---------ALFIN1  --------->ANAC58                                         <---------GLK1(1)--------->ANAC46                                         <---------At4g35610  --------->GLK1(1)                                         <---------ZAT2   --------->ANAC58                     <-----------HVH21   --------->ZAT2  <---------LBD16                <---------ZAT2           --------->GLK1(1)--------->ANAC58                --------->ZAT2           --------->At4g35610 ---------->DOF2                <--------                <---------At4g35610    <------NtERF2   --------->ZAT14                     --------->MYB52(1)      --------->ARR14(2)          --------->ANAC58--------->ZAT2                          --------->ARR14(2) >GLK1(1)     <-----------RAV1(2) --------->ANAC58<---------ZAT2                          <---------ARR14(2) --------->DOF2 --------->At4g35610 <---------LBD16    <---------ZAT2                 ---------->DOF2 ---------->AGL15    <-----------TGA1--------->DEAR3(1)<---------ZAT14        <---------DOF5.7(2)   - -------->MYB52(1) --------->At4g35610--------->LBD16  --------->ZAT2      --------->At5g28300-------   actaaaggaatcggcttcagcagcgtcagtagcgaaacgccggagctccaccagctgagcacggaaagccttgtggcagtaaacgaagaaaagaaccgga  28098400                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                      ------>NtERF2                                                                                     --------->DEAR3(1)                                                                                    --------->ATERF1(1)                                                            ------>NtERF2          ------>NtERF2                                                            --------->LBD16        --------->LBD16                                                           <---------RAP2.6(2)     <---------ATERF1(1)                              --------->LBD16              <---------RAP2.3(2)    --------->ANAC46                           <---------At5g28300             <---------LBD16       <---------LBD16                          <---------WRKY38(1)             <---------LBD16     --------->GLK1(1)    --                        <-----------HVH21     --------->ANAC58                <---------GLK1(1)  ----               --------->GLK1(1)              --------->ANAC58               --------->ARR14(2) -----    ---------->DOF2   --------->MYB46(3)    --------->MYB52(1)               <---------ARR14(2) ----- -LBD16    <------MYB46(1)<---------WRKY12 <---------ARR14(2)   <------NtERF2<---------ARR11(3) ----- -------->At4g35610 --------->MYB52(1)     --------->ARR14(2)<---------LBD16 <-----------ARR10  ----- -->LBD16  <------MYB83------->GAMYB   <-------TEIL    <----------DOF2       --------->ARR11(3)------   gcatcagaaagcttggtatttccaacggtcaccgcataagatgcagaaacggaagcgttttccggcggaagggaatgaagatttccgcctcccatccacc  28098500        --------->MYB52(1)     --------->YAB1   ------------>CBF  ----------->RAV1(1) --------->REM1(1) --------->MYB46(3) --ALFIN1<---------At5g28300 >MYB46(3) -MYB55(2) --------->RAV1(1)                                           ---------->DOF2 ----->LBD16                                     ------------------------>ANAC81 ---->ANAC58                                   ---------->DOF2 ---->DEAR3(1)                           ---------->DOF2 --------->DAG2         ---------->DOF2 ---->ANAC58        --------->GLK1(1) <---------ANAC46  --------->DAG2    ----------------->AGL3 ---->ANAC46 --------->WRKY38(1)     <------NtERF2----------->GT1       <---------ARR14(2)        <-- --->ANAC46 --------->At5g28300    <---------DEAR3(1)  ---------->DOF2  --------->ARR14(2)    -------   gcaacaacaataacggtgactgaaatcaaaaatttcgtcgtcgtgaagcgaaaggagaaaagggaaagaagaaggaaccgattaaaggagtagagaaggt  28098600                                                                                   <---------YAB1                                                                                  --------->AHL20(1)                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(1)                                                                                 --------->YAB1                                                                                 --------->AHL20(2)                                                                    --------->GLK1(2)                                                         <---------ATHB12       <---------YAB1                   <---------ANAC46                   <---------AHL20(2)     <---------AHL20(2)        <---------YAB1    <-----------HVH21     <---------MYB52(1) <---------ARR11(3) ---------->DOF2   <---------ANAC58       --------->ANAC58         --------->ARR11(3)       --------- ---------TBP      <---------ANAC58      --------->SPL7  ------------>CBF    --------->AHL20(2) ---->GT1   <-------TEIL  <-----------TGA1--------->ANAC58       <---------TOE2(3)<---------AHL20(2)   ttttaaaggcatgatacattttcgtagtcgtcactcttctgcgtaagccagtttgtttaatcaatttgagattttgagttttattatattagaagtgact  28098700                                              <------NtERF2                                 ---------        --------->ZAT2    <---------ANAC46  <---------ANAC58  <---------ARR11(3)          <---------MYB111(1)        --------->At4g35610                 <---------ANAC58  --------->ARR11(3)          <---------MYB52(2)        <---------ZAT2    <---------ANAC58  <---------ANAC46 --------->CCA1(1)            <---------MYB59        <---------At4g35610            <---------ICU4    --------->AHL20(2)               <<<<<<<<<<AtMYB44      <-----------RAV1(2) <---------ANAC58 <---------LBD16   --------->RVE1(1)            <---------- <---------O2      ------>MYB83  --------->YAB1          <---------AHL20(2)       <----------DOF2 --------->O2      ------>MYB46(1)  <---------ICU4  ------->TEIL        ---------->ID1    <---------MYB46(2) -->HVH21      >>>>>>>>>MYB2  <---------CCA1(2)  ----------->GT1   <---------MYB52(1)----------->GT1   gagacgttgcagctgaaaaccaactatagcttatatcatatttatggcgggatgtatatttaaatatctgttttgtctctgtttctttggtaactaacta  28098800                                                                                                  ---                                                                   <---------AHL20(2)      --------->AHL20(2)                       ---------->DOF2                             --------->AHL20(2)      --------->ARR11(3)                 <---------YAB1                                   --------->AHL20(2)       <---------AHL20(2)                <---------AHL20(1)                             <---------AHL20(2)          <---------AHL20(1)                <---------AHL20(2)                             --------->AHL20(1)          --------->AHL20(1)          --------->AHL20(2)         ----------->GT1           --------->AHL20(2)          <---------ARR11(3)          <---------AHL20(2)      <<<<<<<<<RAP2.2             --------->AHL20(2)        --------->AHL20(2) >MYB52(1)--------->YAB1         <---------YAB1               <---------AHL20(2)    ----------->GT1<- --MYB.PH3(2) <---------AHL20(2) <---------TOE2(3)        --------->AHL20(2)      ----------->GT1 <--   atttgttttcatttatattatttttaaaagaaatttagattgtgaaaatatgaacagagataaattaaattaatctaacaagaatggagataatatatta  28098900                                                                    <---------ANAC55(2)                                                             <-------GAMYB                                                            --------->MYB111(2)                                                            <---------MYB46(3)                                                            --------->MYB55(2)                                                          <---------ANAC58                                                          <---------ANAC58                                                          <-------GAMYB                        --------->AHL20(2)               <---------MYB46(3)                        <---------AHL20(2)          --------->AHL20(1)                            <--                      <---------YAB1                <---------AHL20(1)                           ----          ----------->GT1     <---------YAB1        <---------ARR11(3)                           ----      <---------YAB1 <---------AHL20(1)       --------->GLK1(2)     --------->ANAC55(2)          ---- ------>ARR11(3)  --------->TOE2(3)      ---------->DOF2<---------YAB1                          ----- -----ZmHOX2a(2) <---------ICU4     <------ZmHOX2a(1)   <---------TOE2(3)             --------->HSFB2a(2) -------ARR11(3) --------->YAB1    ----------->GT1  --------->ARR11(3)       <---------ICU4    <-----   gatcatttacaattgttaaacattatttttttatgagaggaaaaaaagaatcaatattttggttgttgtcaagtattcaagattacttctccaacgtcgt  28099000  Previous    Next  AGI:  At1g74770.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G18910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62484.1); similar to putative E3 ubiquitin ligase [Lotus japonicus] (GB:BAF38781.1); contains InterPro domain Zinc finger, CHY-type; (InterPro:IPR008913); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Hemerythrin/HHE cation-binding motif (InterPro:IPR012312); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 28093232    to: 28098495    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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