Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->ARR14(2)                       ------->TEIL                           <---------ARR14(2)                     <-------TEIL                             ------->TEIL                    --------->AtLEC2                          --------->GLK1(2)             --------->YAB1                              --------->MYB52(1)            <---------YAB1--------->YAB1               --------->AtMYB61          <---------CCA1(1)                            ------->GAMYB          <---------RVE1(1)             <---------ETT(2) ------>MYB46(1)                    ---------         <---------ARR11(3)             --------->ETT(2) ------>MYB83                      <-------TEIL         <---------AHL20(1)     <----------DOF2       --------->MYB46(3)       --------->YAB1 -------         --------->ARR11(3)     <---------DAG2       -------->P    <---------MYB52(1)  <-------TEIL--         --------->AHL20(1)  <-----------GT1        --------->WOX13(1)   ------->TEIL --------->AtLEC2   caatttgtcaagatattataacatgcatttataacttttttgtcgacgataaatcaaccaaacgaatccggtctgtatgtttgataacatgcattcatac  28073600                                                                                                  ---                                                                                                 ----                                        <---------DAG2                                           <---                                        <----------DOF2                <------ZmHOX2a(2)     --------                                     <-----------GT1             -------->HAHB4              --------                               <------MYB46(1)                   --------->YAB1              <-------                         --------->AHL20(2)                     <---------YAB1               <------- >YAB1--------->GLK1(2)  <---------AHL20(2)                   --------->YAB1             <---------AHL20(2) -->AtLEC2 <---------MYB52(1)  <------MYB83    <----------DOF2<---------ICU4     --------->MYB52(1) ------->MYB52(1)       --------->AHL20(2)  <-----------GT1--------->YAB1       --------->AHL20(2)<--   aaaacgattatctgttttttagtctatttaatttggtttctactttttacttttgtgaaactaataataatagatcaaacaattaactgatataatttat  28073700  --------->AHL20(2)  <---------AHL20(2) <---------AHL20(2) <---------AHL20(1) --------->AHL20(2) ------>AHL20(2) ----->AHL20(2)           <-------TEIL ------AHL20(2)        --------->ATHB12              --------->TOE2(3) ->AHL20(1)            -------->HAHB4                <----------DOF2 ->AHL20(2)           <---------ATHB12       --------->ANAC58 --AHL20(1)       --------->AHL20(2)         --------->ANAC58                     <---------YAB1 --AHL20(2)     --------->ANAC58      <---------AHL20(2)                        ---------->DOF2   --- -------AHL20(2)--------->ANAC58     --------->AHL20(2)              <----------DOF2             ----   taatttaattcttagaccaagtaaatgattcatgaaatattaaatgcacgactaactttagaaaaatgtttctttgtatacataaagatagaatagaaga  28073800                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                       ------------>CBF                                                                                   --------->ARR14(3)                                                                                   <---------ARR14(2)                                                                                   --------->ARR14(2)                                                                                   <---------ARR14(3)                                                                                   <---------ARR11(3)                    ----------->GT1        ---------->DOF2                         --------->ARR11(3)    <------ZmHOX2a(1)                 --------->ZAT14            <---------ANAC46  --------->GLK1(2)- ------>DAG2       <---------------------WRI1     --------->GLK1(2)           ----------->GT1      <- ------>DOF2      --------->MYB52(1)  <---------ZAT14          <---------ANAC46--------->YAB1     <--   aaagtaggattagaagaaaaaaacgaaaatttcagagtagtttactaaagaaattctgagaaattttgtgtgaaaatgaaatgaaaatcttcaattttag  28073900          --------->REM1(1)    ------->PIF5    <-------PIF5   <---------At4g35610   <------NtERF2   ----------->RAV1(2)  <---------ATERF1(1) ---------PCF2 -------->PCF5 -------->TCP15(1) -------->TCP20 -------->TCP11(2) -------->ATERF1(1)         --------->ARR11(3) --------TCP15(2)           <---------ARR11(3) --------->TCP11(1)        <---------CCA1(2) --------TCP23           <---------AHL20(2) -------->TCP16(1)       --------->AHL20(2)                                                      ---- --------ATERF1(1)     <-----------TBP                             ---------->DOF2 <---------ZAT14 -------ZAT18    <---------ZAT18        --------->ZAT6  *TSS  --------->MYB52(1)   --------->ZAT14   tgggcccctgctacatcagtcccctatttatatctcttctcaactctaaacccaaaccaaaaaaaaacagaaagagcaatctctctatactacaaacacc  28074000                        --------->ANAC58                        --------->ANAC46                        --------->ANAC58                 --------->ARR11(3)                 <---------ARR11(3)                 <---------ARR14(3)                 --------->ARR14(3)      <---------ARR14(2)                 --------->GLK1(2)       --------->ARR14(2)         <---------AHL20(2)     <---------DAG2                   <-----------GT1         --------->AHL20(2)     <----------DOF2     <---------ANAC58                     --------->ZAT6 ------>DOF2     --------->ARR14(2)    ------->TEIL <---------ANAC58        --------->GLK1(2)      --   aaagtttaaaattaaacaaaatcttcaagaaacactttacgaatttctgcaatggcttcacttcaattttcttctcagtttctgggctcaaacactaaaa  28074100                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)                                                            --------->LBD16                                                           --------->ANAC58                                                           --------->ANAC46                                                           --------->ANAC58          --------->YAB1                                  <---------LBD16         <---------ATHB12                           <---------ARR14(2)          <XXXXXXXXXXXXXXXXXXXXMIR863-3P   <---------At4g35610       <-----------GT1        <---------GLK1(2)        <---------MYB52(1)   --------->At4g35610    <---------TOE1(2)         --------->ARR14(2)  <-----------GT1     <-------- ------->ANAC46   <---------CCA1(2)               ----------->ARR10 <----------DOF2    ---------->ID1   cacacagctctatcatttccatctctcgtagttactctccaactccattcactagattctcccgcaaggtcttttttctgttttgttttgtttttttcaa  28074200                                <-----------GT1                              <---------WOX13(1)                            -------->HAHB4                            <---------ICU4                            --------->ATHB12                            --------->YAB1                           --------->ICU4                           <---------YAB1 --------->ATHB12                         <---------ICU4  <---------AHL20(2)                         --------->YAB1  <---------YAB1 --------->HSFB2a(2)                        --------->ICU4   --------->AHL20(1)                   --------->GLK1(1)     --------->AHL20(2)                   <---------GLK1(1)    <---------AHL20(2)                                    <------     <----------DOF2  --------->YAB1    --------->AHL20(2)                               <---------MYB46(3) ---GT1          <------ZmHOX2a(1)--------->TOE2(3)     <---------HSFB2a(2)         <---------YAB1   ttctgttcttttttttggaggaattcataatgattaacttaattttattggataattttcagaagtatgagtcatgttcgatgtctatgaatggttgtga  28074300                                                                        ----------->HVH21                                                                     <---------ALFIN1                                                                    <------NtERF2                                                                   <---------RAP2.6(3)                                                                   ------>NtERF2                                                                  --------->RRTF1(2)                                                                  ------->GAMYB                                                                  --------->RAP2.3(2)                                                                  --------->RAP2.6(2)                                                                  <---------ATERF1(2)                                                                  --------->ANAC46                                                                  --------->RAP2.3(3)                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                  --------->DEAR3(1)                                                                  --------->ATERF1(2)                                                                 --------->MYB46(3)                                                                 --------->ATERF1(1)                                                                 --------->RAP2.3(1)                                                                 --------->RRTF1(1)                                                                <---------ZAT2                   ----                                                                <------NtERF2                    <---                                                                <---------At4g35610        ------>NtERF2                                                                --------->At4g35610       --------->RAP2.3(2)                      <---------ZAT14                           --------->ZAT2            --------->DEAR3(1)                      --------->ZAT14                           <---------ATERF1(1)       --------->RAP2.3(3)                --------->O2                                    --------->ATERF1(1)      --------->RAP2.3(1)                <---------O2                                   <---------ATERF1(1)      --------->LBD16              <---------ALFIN1      <------ZmHOX2a(1)       <-----------HVH21           ------>NtERF2            ------>NtERF2 --------->ALFIN1                  ------>NtERF2               <---------ATERF1(1)           --------->ANAC58       --------->ANAC58          --------->LBD16            --------->DEAR3(1)           --------->ANAC58  <----------ARF1  <---------ZAT14<---------MYB52(1)        --------->ANAC46           --------->ANAC46--------->ZAT14    <---------At4g35610--------->ERF1       <---------LBD16   --------->GLK1(1) <<<<<<<<<<<<<<<<<LFY<---------YAB1    --------->ANAC46       <-----------ARR10 ---YAB1   --------->RAP2.6(2)    --------->ANAC58        <---------LBD16 ---------->DOF2--------->ORA47(2)   tggagatttcaagacgccacttggtacagtggagacaaggactatgactgctgttttatctccggcagccgccactgaaaggctaatctccgccgtctct  28074400                                         <-----------HVH21                                         <-------GAMYB                                        <------MYB83                                        <------MYB46(1)                   --------->YAB1                                     <---------MYB52(1)                   <---------ICU4                                  <------NtERF2                          <---------YAB1                                 ------>NtERF2                         <---------ICU4                                 <-----------HVH21                     --------->YAB1                                <---------DEAR3(1)                 <---------YAB1                  <---------MYB52(1)<---------SPL7               --------->YAB1                 --------->LBD16<---------ANAC46                 <---------ICU4             --------->TOE2(2)  --------->DEAR3(1)              <---------YAB1       --------->TOE2(3)      <---------ATERF1(1)          --------->REM1(1)     <-----------ARR10        --------->LBD16      --------->REM1(1)  <---------YAB1    <---------CCA1(2)       <---------LBD16       <-------TEIL--------->YAB1<---------YAB1 ----->ZAT14 ------->GAMYB ------>ZmHOX2a(1)  <---------------AtSPL8--------->YAB1    <---------MYB52(1) ------ZAT14--------->MYB46(3)------>NtERF2   <---------------AtSPL3<---------ICU4------>ZmHOX2a(1)--   gaactcaaatctcaacctccgtcgttttcctccggcgtcgttcggttacaggtacatcactacatcatcatcatcatcatcatcctctgtttttttcttc  28074500  Previous    Next  AGI:  At1g74710.1    Description:  ICS1 (ISOCHORISMATE SYNTHASEI); isochorismate synthase. Identical to Isochorismate synthase 1, chloroplast precursor (ICS1) [Arabidopsis Thaliana] (GB:Q9S7H8;GB:O81522;GB:Q9ASQ4); similar to ICS2, isochorismate synthase [Arabidopsis thaliana] (TAIR:AT1G18870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62512.1); contains InterPro domain Chorismate binding, C-terminal (InterPro:IPR015890); contains InterPro domain Isochorismate synthase; (InterPro:IPR004561); contains InterPro domain Anthranilate synthase component I and chorismate binding protein; (InterPro:IPR005801) Range:  from: 28073956    to: 28077809    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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